Miyakogusa Predicted Gene

Lj0g3v0293169.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0293169.3 tr|G7J5F6|G7J5F6_MEDTR Serine/threonine protein
kinase ATM OS=Medicago truncatula GN=MTR_3g077770
PE,76.56,0,seg,NULL,CUFF.19621.3
         (575 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g35410.1                                                       637   0.0  
Glyma06g19350.1                                                       360   2e-99

>Glyma04g35410.1 
          Length = 429

 Score =  637 bits (1643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/384 (81%), Positives = 337/384 (87%), Gaps = 27/384 (7%)

Query: 1   MATVTSRDVQEILDKLSSDKAKPRE---------------------------EGIKLLNT 33
           MA VTSRDVQEI++KLSSDKAK RE                           EGIKLLNT
Sbjct: 1   MAKVTSRDVQEIVEKLSSDKAKAREHYTFSFSCCTTKKLQHSGLRMLISYIFEGIKLLNT 60

Query: 34  WLEGERSYNFCEFIGLNTAKLRANEVPHSETWPFLISLLIQCVSSEISSSKRRNPKMTYA 93
           WLEGERSYNFC+FIG NTAKLR +EVPHSETWPFLISLLI+  S+EISSSKRRNPKM YA
Sbjct: 61  WLEGERSYNFCKFIGSNTAKLRPDEVPHSETWPFLISLLIKSASAEISSSKRRNPKMIYA 120

Query: 94  KTLRVVVQRAEDAKYSGKMLPLSSVVKPLFNHVWDVLSNVPSFQSEYGIILRHLLAVKDY 153
           KTLR+VVQRAEDAK SGKMLPLSSVVKPLFNHVWDVLSNVPSFQSEYGIILRHLL+V+DY
Sbjct: 121 KTLRIVVQRAEDAKCSGKMLPLSSVVKPLFNHVWDVLSNVPSFQSEYGIILRHLLSVRDY 180

Query: 154 SLQMRKRIYCSLVILYMEKVEASLNGKNISHCTSKEEVFRFILTLHSLLDYPPGDYPDNL 213
           S QMRKRIYC+LV LY+EKVEASLNGKNIS+CTSKEEVFR+ILTLHSLL YPPGDYPDN 
Sbjct: 181 SFQMRKRIYCNLVFLYIEKVEASLNGKNISNCTSKEEVFRYILTLHSLLKYPPGDYPDNA 240

Query: 214 REDIVQGFVRICSFIREDGKISRKLIECINTYLLNDGPNLGFQLLEIHNAIEQFLFRCWL 273
           REDIV+GFVRICSFIRE+GKISRKL+ECINTYLLNDGPNLGFQL EIHNA++QF+FR WL
Sbjct: 241 REDIVKGFVRICSFIREEGKISRKLVECINTYLLNDGPNLGFQLFEIHNAMQQFVFRSWL 300

Query: 274 TTHDRVLKDSLMFYARIQLNLVRGAGDKCLLVEQLLDVIYKDLDQGSMSSTSITRGDGQK 333
           TTHDRVLKDSL+FYARIQLNL+ GA D+CLLVEQLLDVI KDLDQGSMSSTS+ RGDG K
Sbjct: 301 TTHDRVLKDSLVFYARIQLNLISGAADRCLLVEQLLDVICKDLDQGSMSSTSMLRGDGNK 360

Query: 334 DDKLGVLSSSQCGLVELAAVLFFK 357
           DDKLG LSSSQCGLVELAAVLF++
Sbjct: 361 DDKLGALSSSQCGLVELAAVLFYR 384


>Glyma06g19350.1 
          Length = 249

 Score =  360 bits (924), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 173/210 (82%), Positives = 193/210 (91%)

Query: 170 MEKVEASLNGKNISHCTSKEEVFRFILTLHSLLDYPPGDYPDNLREDIVQGFVRICSFIR 229
           +EKVEA LNGKNIS+CTSKEEVFR ILTLHSLL YPP DYPDN+REDIV+GFVRICSF+R
Sbjct: 12  LEKVEARLNGKNISNCTSKEEVFRNILTLHSLLKYPPRDYPDNVREDIVKGFVRICSFVR 71

Query: 230 EDGKISRKLIECINTYLLNDGPNLGFQLLEIHNAIEQFLFRCWLTTHDRVLKDSLMFYAR 289
           E+GKISRKL+ECINTYLLNDGPNLGFQL EIHNA++QF+F  WLTTHDRVLKDS  FYAR
Sbjct: 72  EEGKISRKLVECINTYLLNDGPNLGFQLFEIHNAMQQFVFCSWLTTHDRVLKDSFAFYAR 131

Query: 290 IQLNLVRGAGDKCLLVEQLLDVIYKDLDQGSMSSTSITRGDGQKDDKLGVLSSSQCGLVE 349
           IQLNL+R A ++CLLVEQLLD+I KDLDQGSMSSTS+ RG G KDDKLG LSSSQCGLVE
Sbjct: 132 IQLNLMRVATNRCLLVEQLLDMICKDLDQGSMSSTSMLRGYGNKDDKLGALSSSQCGLVE 191

Query: 350 LAAVLFFKACLNTTKASLSEKRVKREPAAM 379
           LAAVLF++A LNTT++SLSEKRVKREPAA+
Sbjct: 192 LAAVLFYRAYLNTTRSSLSEKRVKREPAAL 221