Miyakogusa Predicted Gene

Lj0g3v0292949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0292949.1 tr|G7JTY5|G7JTY5_MEDTR Squalene epoxidase
OS=Medicago truncatula GN=MTR_4g092640 PE=4
SV=1,69.05,0.00000000000007,no description,NULL;
seg,NULL,NODE_51951_length_404_cov_44.841583.path2.1
         (83 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g30440.1                                                        76   6e-15
Glyma08g06810.1                                                        72   2e-13
Glyma08g06810.2                                                        71   3e-13

>Glyma07g30440.1 
          Length = 534

 Score = 76.3 bits (186), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 6/84 (7%)

Query: 1  MDYQYLLGGILACYACSLAFLFVLYSFAAKRNATSSSLLHLKSNGCAK-TSENGICQQKG 59
          MDYQY+LGGI+AC   S AFL+V+YSF AK   T SS +H+KSN CAK +SENGIC  + 
Sbjct: 1  MDYQYILGGIMAC---SFAFLYVVYSFGAK--VTDSSSIHVKSNECAKISSENGICSHED 55

Query: 60 EGSXXXXXXXXXXXXXXXXYTLGK 83
           GS                 TLGK
Sbjct: 56 AGSADIIIVGAGVAGSALACTLGK 79


>Glyma08g06810.1 
          Length = 525

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 6/85 (7%)

Query: 1  MDYQYLLGGILACYACSLAFLFVLYSFAAKRNATSSSLLHLKSNGCAKT-SENGICQQKG 59
          MDY Y+LGGI+AC   S AFL+V+YSF AK+  T SS +H+KSN CAKT SE GIC    
Sbjct: 1  MDYPYILGGIMAC---SFAFLYVVYSFGAKK-VTDSSSIHVKSNECAKTSSEGGICSSDE 56

Query: 60 E-GSXXXXXXXXXXXXXXXXYTLGK 83
          + GS                YTLGK
Sbjct: 57 DAGSADIIIVGAGVAGAALAYTLGK 81


>Glyma08g06810.2 
          Length = 513

 Score = 70.9 bits (172), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 6/85 (7%)

Query: 1  MDYQYLLGGILACYACSLAFLFVLYSFAAKRNATSSSLLHLKSNGCAKT-SENGICQQKG 59
          MDY Y+LGGI+AC   S AFL+V+YSF AK+  T SS +H+KSN CAKT SE GIC    
Sbjct: 1  MDYPYILGGIMAC---SFAFLYVVYSFGAKK-VTDSSSIHVKSNECAKTSSEGGICSSDE 56

Query: 60 E-GSXXXXXXXXXXXXXXXXYTLGK 83
          + GS                YTLGK
Sbjct: 57 DAGSADIIIVGAGVAGAALAYTLGK 81