Miyakogusa Predicted Gene

Lj0g3v0292149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0292149.1 Non Chatacterized Hit- tr|K3Z0N2|K3Z0N2_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,44.53,1e-17,seg,NULL,CUFF.19525.1
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g39230.1                                                       179   1e-45
Glyma11g06040.1                                                       169   1e-42
Glyma02g15030.1                                                       104   4e-23
Glyma07g33430.1                                                       102   2e-22

>Glyma01g39230.1 
          Length = 205

 Score =  179 bits (455), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/209 (54%), Positives = 134/209 (64%), Gaps = 31/209 (14%)

Query: 1   MACLDMYNNSEHKGXXXXXXXXXXPVSPRISFGNDFVDAKQASKQERSFRSDASVPVSSD 60
           MACL+MYN+  +KG          P+SPRISF NDFVD KQA KQE+   S +  PVSSD
Sbjct: 1   MACLEMYNSEHNKGDHQHHHQCAPPMSPRISFSNDFVDVKQAMKQEQRGSSRSDAPVSSD 60

Query: 61  FEFSVSNYNMMSADELFSKGRLLP-----------FKDGGCNNQVQRP----TTTLREEL 105
           FEFSV+NY+MMSADELF KGRL+              +     Q QR     TTTL+EEL
Sbjct: 61  FEFSVANYSMMSADELFFKGRLMSTYNKDNCNNNNKNNHMMMMQQQRATTTTTTTLKEEL 120

Query: 106 MVDDD----EFSLRPPKGSSSTRWKGFLGLRKSHIGSKKVDKS-EGSSNRGVQAARSGLS 160
           +++DD    +FSLRPPK  SSTRWKG LGLRK+HIGSKK  KS EG S+    A RS L 
Sbjct: 121 LINDDDHDHDFSLRPPK-PSSTRWKGLLGLRKTHIGSKKPHKSTEGGSS---DATRSALV 176

Query: 161 N-------MTSQDLLIEGGSSCRDVEFGI 182
           N        +SQ++L EGGSSCRD+E GI
Sbjct: 177 NDSPPTSITSSQEVLNEGGSSCRDLEIGI 205


>Glyma11g06040.1 
          Length = 183

 Score =  169 bits (429), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/155 (61%), Positives = 110/155 (70%), Gaps = 14/155 (9%)

Query: 1   MACLDMYNNSEH----KGXXXXXXXXXXPVSPRISFGNDFVDAKQASK--QERSFRSDAS 54
           MACL+MYNNSEH    KG          P+SPRISF NDFVD +QA K  ++R   S + 
Sbjct: 1   MACLEMYNNSEHNKNNKGDNHHHHHQCAPMSPRISFSNDFVDVQQAMKLQEQRGGSSRSD 60

Query: 55  VPVSSDFEFSVSNYNMMSADELFSKGRLL--PFKDGGCNNQVQRPTTTLREELMVDDDE- 111
            PVSSDFEFSV+NY MMSADELF KGRL+   + +   NNQ QR TTTL+EEL+++DDE 
Sbjct: 61  TPVSSDFEFSVANYTMMSADELFFKGRLMSSTYVNTDNNNQ-QRATTTLKEELLINDDEY 119

Query: 112 ---FSLRPPKGSSSTRWKGFLGLRKSHIGSKKVDK 143
              FSLRPPK  SSTRWKG LGLRKSHIGSKK  K
Sbjct: 120 DHNFSLRPPK-PSSTRWKGLLGLRKSHIGSKKPHK 153


>Glyma02g15030.1 
          Length = 136

 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/132 (50%), Positives = 84/132 (63%), Gaps = 14/132 (10%)

Query: 26  VSPRISFGNDFVDAKQASKQERSFRSDASVPVSSDFEFSVSNYNMMSADELFSKGRLLPF 85
           + PRISF  DFV ++QA K E  +R D   PVSSDFEFSV N +M+SADE+F +G LLP 
Sbjct: 1   MDPRISFSYDFVVSQQAIKHENIYRED---PVSSDFEFSVKNNSMISADEVFFQGMLLPL 57

Query: 86  KDGGCNNQVQRPTTTLREELMVDDDEFSLRPPK-GSSSTRWKGFLGLRKSHIGSKKVDKS 144
           K    N +V     TLR+EL+V+DD +    P+   SS+RWK  LGLRK   GS K DK+
Sbjct: 58  KSDCSNKKV-----TLRDELLVNDDHYEEELPRLPKSSSRWKERLGLRK---GSSKKDKN 109

Query: 145 EGSSNRGVQAAR 156
           +  +N G Q  R
Sbjct: 110 K--NNEGFQQTR 119


>Glyma07g33430.1 
          Length = 135

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/131 (49%), Positives = 82/131 (62%), Gaps = 13/131 (9%)

Query: 26  VSPRISFGNDFVDAKQASKQERSFRSDASVPVSSDFEFSVSNYNMMSADELFSKGRLLPF 85
           + PRISF  DFV ++QA K E  +R D   PVSSDFEFSV N +M+SADE+F +G LLP 
Sbjct: 1   MDPRISFSYDFVVSQQAIKHENIYRED---PVSSDFEFSVKNNSMISADEVFFQGMLLPL 57

Query: 86  KDGGCNNQVQRPTTTLREELMVDDDEFSLRPPKGSSSTRWKGFLGLRKSHIGSKKVDKSE 145
           K    N +V     TLR+EL+V+DD     P    SS+RWK  LGLR+   GS K DK++
Sbjct: 58  KSDCSNKKV-----TLRDELLVNDDYEEELPRIPKSSSRWKQRLGLRR---GSSKKDKNK 109

Query: 146 GSSNRGVQAAR 156
             +N G Q  R
Sbjct: 110 --NNEGFQQTR 118