Miyakogusa Predicted Gene

Lj0g3v0291479.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291479.1 tr|B9H204|B9H204_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_817748 PE=4
SV=1,45.69,0.000000000000001,
,NODE_85545_length_479_cov_42.432152.path1.1
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g32100.1                                                       209   8e-55
Glyma15g07220.1                                                       202   6e-53
Glyma07g30850.1                                                       142   8e-35
Glyma08g06450.1                                                       141   2e-34

>Glyma13g32100.1 
          Length = 625

 Score =  209 bits (531), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 103/135 (76%), Positives = 114/135 (84%), Gaps = 1/135 (0%)

Query: 1   MLRDIKRAAQSVCKL-SRGIGLQRNGPIGSVGSNIHQRRVYMQYKFPSEARSSLLWHATR 59
           MLR+I+RAAQSVC++ SR + + +NGP+ SVG NIH  R+YMQYKFPSEA SS LWH TR
Sbjct: 1   MLRNIRRAAQSVCRINSRYLEVSKNGPVVSVGPNIHHCRLYMQYKFPSEACSSFLWHGTR 60

Query: 60  ENFNKCCSFRSFSVTSASNGVTRHSQIAWKRLYRKYCSSDDGAFPPTIYMIAQAVSLALA 119
           E F K  SFR+FSVTSASN VT HSQIAWKRLYRKYCSS DG FPPT+ MIAQAVSLALA
Sbjct: 61  EGFRKRGSFRNFSVTSASNTVTHHSQIAWKRLYRKYCSSGDGTFPPTVNMIAQAVSLALA 120

Query: 120 RSYLLVPGIFAFTCG 134
           RSYLLVPGI AFTCG
Sbjct: 121 RSYLLVPGILAFTCG 135


>Glyma15g07220.1 
          Length = 625

 Score =  202 bits (515), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 99/135 (73%), Positives = 110/135 (81%), Gaps = 1/135 (0%)

Query: 1   MLRDIKRAAQSVCKLSRG-IGLQRNGPIGSVGSNIHQRRVYMQYKFPSEARSSLLWHATR 59
           MLR+I+RAAQSVC+++R  + +  NG +  VG NIH  R+YMQYKFPSEA SS LWH TR
Sbjct: 1   MLRNIRRAAQSVCRINRRYLEVSENGAVALVGPNIHHCRLYMQYKFPSEACSSFLWHGTR 60

Query: 60  ENFNKCCSFRSFSVTSASNGVTRHSQIAWKRLYRKYCSSDDGAFPPTIYMIAQAVSLALA 119
           E F KC SFR+FSVTSASN VT HSQIAWKRLYRKYCSS DG FPPT+ MIAQAVSLALA
Sbjct: 61  EGFRKCGSFRNFSVTSASNAVTHHSQIAWKRLYRKYCSSGDGTFPPTVNMIAQAVSLALA 120

Query: 120 RSYLLVPGIFAFTCG 134
           RSY LVPGI AFT G
Sbjct: 121 RSYFLVPGILAFTWG 135


>Glyma07g30850.1 
          Length = 622

 Score =  142 bits (359), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 77/136 (56%), Positives = 92/136 (67%), Gaps = 3/136 (2%)

Query: 1   MLRDIKRAAQSVCKLS--RGIGLQRNGPIGSVGSNIHQRRVYMQYKFPSEARSSLLWHAT 58
           ML ++ + AQS+ +    R +   RN    SVG NI   ++YMQYKFPSE RSS LWH T
Sbjct: 1   MLGNVGKVAQSILRTHGRRYLEASRNEAFNSVGPNIKHCKMYMQYKFPSEGRSSFLWHWT 60

Query: 59  RENFNKCCSFRSFSVTSASNGVTRHSQIAWKRLYRKYCSSDDGAFPPTIYMIAQAVSLAL 118
           RENF+K CSFR+FSV SASN    + +IAWK LY+KY S+    F  +I MIAQAVSLAL
Sbjct: 61  RENFHKGCSFRNFSVISASNVAAYNCRIAWKFLYKKYSSNGYNGF-TSINMIAQAVSLAL 119

Query: 119 ARSYLLVPGIFAFTCG 134
            RSYLLVPG  AF  G
Sbjct: 120 TRSYLLVPGFLAFASG 135


>Glyma08g06450.1 
          Length = 622

 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/136 (57%), Positives = 93/136 (68%), Gaps = 3/136 (2%)

Query: 1   MLRDIKRAAQSVCKLSRGIGLQ--RNGPIGSVGSNIHQRRVYMQYKFPSEARSSLLWHAT 58
           ML ++ + AQS+ +  R   L+  RN    SVG NI Q R+YMQYKFP E  +S LWH T
Sbjct: 1   MLGNVGKVAQSILRTHRRRYLEASRNEAFTSVGPNIKQCRMYMQYKFPIEGCNSFLWHWT 60

Query: 59  RENFNKCCSFRSFSVTSASNGVTRHSQIAWKRLYRKYCSSDDGAFPPTIYMIAQAVSLAL 118
           RENF+K CSFR+FSVTSA N    +S+IAWK LY+KY S+    F  +I MIAQAVSLAL
Sbjct: 61  RENFHKGCSFRNFSVTSARNVAAYNSRIAWKLLYKKYSSNGYNGF-TSINMIAQAVSLAL 119

Query: 119 ARSYLLVPGIFAFTCG 134
            RSYLLVPG  AF  G
Sbjct: 120 TRSYLLVPGFLAFASG 135