Miyakogusa Predicted Gene

Lj0g3v0291089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291089.1 Non Chatacterized Hit- tr|E1ZJV9|E1ZJV9_CHLVA
Putative uncharacterized protein OS=Chlorella variabil,20.3,0.0005,no
description,FMN-binding split barrel; FMN-binding split
barrel,FMN-binding split barrel-related; ,CUFF.19459.1
         (309 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g52640.1                                                       377   e-105
Glyma02g10270.1                                                       176   2e-44

>Glyma18g52640.1 
          Length = 241

 Score =  377 bits (969), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/241 (76%), Positives = 208/241 (86%), Gaps = 1/241 (0%)

Query: 68  NTIIDERGSFAVTSPFPGPLGVLLKSLDKLPARIALSGDIRPLNEDKAKSLAEKLQEVIL 127
           NTIIDERGSFAVTSP+PGPLG+LLKSL KLPARIALSGD+ PL EDKAKSLAEKLQEV+L
Sbjct: 1   NTIIDERGSFAVTSPYPGPLGILLKSLKKLPARIALSGDVLPLKEDKAKSLAEKLQEVML 60

Query: 128 SEQKAIKEFTYTXXXXXXXXXXXXXXX-DNLQELLRDDEKYSVYRFKIRSCTFLDGRGGN 186
           SE+KAIKEFTYT                DNLQ+LL D+E+Y++YRFK RSCTF+DG GG 
Sbjct: 61  SEKKAIKEFTYTVSGVLSSSASSSTSRSDNLQDLLGDNERYTIYRFKTRSCTFVDGLGGT 120

Query: 187 FEVDVENLETTKADKLAPFSAKLIDGINQSEARRRALVLLCFVDMNAHAKDAYVTSIDRK 246
           F+VDVE+LET++AD LAPFSAK++DGINQSEARR AL+L CFV  +A+AKDAY+TSIDRK
Sbjct: 121 FDVDVEDLETSRADPLAPFSAKIVDGINQSEARRTALMLFCFVYKDANAKDAYITSIDRK 180

Query: 247 GFDVLAKVMSPVLKDGVGHYQWKEFRFMFKEEAKDVEMFCSQLVEMEEEVIYKISTSSGL 306
           GFDVLAKV SPVLKDG+  YQWKEFRFMFKEEA DVEMFCSQLVEMEEEVI K+STSSGL
Sbjct: 181 GFDVLAKVSSPVLKDGIDGYQWKEFRFMFKEEANDVEMFCSQLVEMEEEVINKVSTSSGL 240

Query: 307 K 307
           K
Sbjct: 241 K 241


>Glyma02g10270.1 
          Length = 111

 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 87/132 (65%), Positives = 101/132 (76%), Gaps = 21/132 (15%)

Query: 176 SCTFLDGRGGNFEVDVENLETTKADKLAPFSAKLIDGINQSEARRRALVLLCFVDMNAHA 235
           SCTF+DG GG F+VD+E+LET+KAD LA FSAK++DGI                      
Sbjct: 1   SCTFVDGLGGTFDVDIEDLETSKADPLASFSAKIVDGI---------------------C 39

Query: 236 KDAYVTSIDRKGFDVLAKVMSPVLKDGVGHYQWKEFRFMFKEEAKDVEMFCSQLVEMEEE 295
           +D Y+TSIDRKGFDVLAKV SPVLKDG+G YQWKEFRFMFKEEA +VEMFCSQ+VEME+E
Sbjct: 40  EDTYITSIDRKGFDVLAKVTSPVLKDGIGGYQWKEFRFMFKEEANNVEMFCSQVVEMEKE 99

Query: 296 VIYKISTSSGLK 307
           VI K+STSSGLK
Sbjct: 100 VINKVSTSSGLK 111