Miyakogusa Predicted Gene

Lj0g3v0291009.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291009.1 Non Chatacterized Hit- tr|I1KAS9|I1KAS9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,91.36,0,ATPases
associated with a variety of cellula,AAA+ ATPase domain; ATP-DEPENDENT
CLP PROTEASE ATP-BIND,CUFF.19456.1
         (317 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g13450.1                                                       553   e-158
Glyma04g41400.1                                                       553   e-158
Glyma09g28260.1                                                       513   e-146
Glyma20g35600.1                                                       483   e-136
Glyma16g33080.1                                                       474   e-134
Glyma10g32040.1                                                       239   3e-63
Glyma08g19920.1                                                        51   2e-06
Glyma11g02270.1                                                        49   6e-06

>Glyma06g13450.1 
          Length = 524

 Score =  553 bits (1426), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 275/301 (91%), Positives = 287/301 (95%), Gaps = 3/301 (0%)

Query: 2   EGCWGGSNLGGNFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRVFHETSLKSKWPA 61
           EGCWGGSNLG +FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKR+F+ETSL  KWPA
Sbjct: 93  EGCWGGSNLGNSFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIFNETSL-PKWPA 151

Query: 62  GDSSDNGNRAEAIDDDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLT 121
           GDS DN  + +A DDD RVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADAT+LT
Sbjct: 152 GDS-DNSVKVDAADDD-RVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATSLT 209

Query: 122 QAGYVGEDVESILYKLLLAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQH 181
           QAGYVGEDVESILYKLL+ ADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQ 
Sbjct: 210 QAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQ 269

Query: 182 ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTISDRRQDSSIGF 241
           ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTIS+RR DSSIGF
Sbjct: 270 ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGF 329

Query: 242 GAPVRAKMRTGGVTDSAIASSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQ 301
           GAP+RA MRTG VT++A+ASSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQ
Sbjct: 330 GAPIRANMRTGKVTEAAVASSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQ 389

Query: 302 V 302
           V
Sbjct: 390 V 390


>Glyma04g41400.1 
          Length = 524

 Score =  553 bits (1425), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 271/301 (90%), Positives = 287/301 (95%), Gaps = 2/301 (0%)

Query: 2   EGCWGGSNLGGNFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRVFHETSLKSKWPA 61
           EGCWGGSNLG +FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKR+F+ETS  SKWPA
Sbjct: 92  EGCWGGSNLGNSFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIFNETS-SSKWPA 150

Query: 62  GDSSDNGNRAEAIDDDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLT 121
           GDS +N  + +A+DDD RVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADAT+LT
Sbjct: 151 GDSDNNNVKTDAVDDD-RVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATSLT 209

Query: 122 QAGYVGEDVESILYKLLLAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQH 181
           QAGYVGEDVESILYKLL+ ADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQ 
Sbjct: 210 QAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQ 269

Query: 182 ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTISDRRQDSSIGF 241
           ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTIS+ R DSSIGF
Sbjct: 270 ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTISESRHDSSIGF 329

Query: 242 GAPVRAKMRTGGVTDSAIASSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQ 301
           GAP+RA MRTG VT++A+ASSLL+TVESSDL+AYGLIPEFVGRFPILVSLSALTENQLIQ
Sbjct: 330 GAPIRANMRTGKVTEAAVASSLLQTVESSDLVAYGLIPEFVGRFPILVSLSALTENQLIQ 389

Query: 302 V 302
           V
Sbjct: 390 V 390


>Glyma09g28260.1 
          Length = 659

 Score =  513 bits (1322), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 252/299 (84%), Positives = 277/299 (92%), Gaps = 6/299 (2%)

Query: 4   CWGGSNLGGNFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRVFHETSLKSKWPAGD 63
            WGGSNLG +FP+PKEICKGLDKFVIGQ+RAKKVLSVAVYNHYKR++H T  K     G 
Sbjct: 231 AWGGSNLGKDFPSPKEICKGLDKFVIGQQRAKKVLSVAVYNHYKRIYHATLQK-----GS 285

Query: 64  SSDNGNRAEAIDDDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 123
           ++D+G  +E +DDDD VELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA
Sbjct: 286 AADSG-ASEVLDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 344

Query: 124 GYVGEDVESILYKLLLAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQHAL 183
           GYVGEDVESILYKLL+AAD+NVAAAQQGI+YIDEVDKITKKAESLNISRDVSGEGVQ AL
Sbjct: 345 GYVGEDVESILYKLLVAADFNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQAL 404

Query: 184 LKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTISDRRQDSSIGFGA 243
           LKMLEGT+VNVPEKGARK+PRGDNIQ+DTKNILFICGGAF+DLEKTIS+RRQDSSIGFGA
Sbjct: 405 LKMLEGTIVNVPEKGARKNPRGDNIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGA 464

Query: 244 PVRAKMRTGGVTDSAIASSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQV 302
           PVRA MR  G+TDSA+ SSLLE+VES+DLIAYGLIPEF+GRFPILVSLSALTE+QL  V
Sbjct: 465 PVRANMRAVGITDSAVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLTMV 523


>Glyma20g35600.1 
          Length = 506

 Score =  483 bits (1242), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/323 (75%), Positives = 275/323 (85%), Gaps = 23/323 (7%)

Query: 2   EGCWGGSNLGGNFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRVFHET-----SLK 56
           +G  GGSNLG +FPTPKEICKGLDKFVIGQ RAKKVLSVAVYNHY+R++  +        
Sbjct: 49  DGWVGGSNLGRDFPTPKEICKGLDKFVIGQHRAKKVLSVAVYNHYQRIYQGSLSFFFRYH 108

Query: 57  SKWPAGDSSDNGNRAEAIDDDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIAD 116
           + +     +D G  ++ +DD D VELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFVIAD
Sbjct: 109 TFFIHFVIADEG-LSQGLDDGDDVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIAD 167

Query: 117 ATTLTQA-----------------GYVGEDVESILYKLLLAADYNVAAAQQGIVYIDEVD 159
           ATTLTQA                 GYVGEDVESILYKLL AA++NV AAQQGIVYIDEVD
Sbjct: 168 ATTLTQAILAISDLVPWFTQGFIAGYVGEDVESILYKLLAAAEFNVQAAQQGIVYIDEVD 227

Query: 160 KITKKAESLNISRDVSGEGVQHALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFIC 219
           KITKKAESLNISRDVSGEGVQ ALLKMLEGT+VNVPE+GARKHPRGDNIQIDTKNILFIC
Sbjct: 228 KITKKAESLNISRDVSGEGVQQALLKMLEGTMVNVPERGARKHPRGDNIQIDTKNILFIC 287

Query: 220 GGAFVDLEKTISDRRQDSSIGFGAPVRAKMRTGGVTDSAIASSLLETVESSDLIAYGLIP 279
           GGAF+DLEKTIS+RRQDSSIGFG+PVR+ MRTGGVT++A+ SSLLE+VES+DLIAYGLIP
Sbjct: 288 GGAFIDLEKTISERRQDSSIGFGSPVRSNMRTGGVTNAAVTSSLLESVESADLIAYGLIP 347

Query: 280 EFVGRFPILVSLSALTENQLIQV 302
           EF+GRFPIL+SLSALTE+QL+QV
Sbjct: 348 EFIGRFPILISLSALTEDQLMQV 370


>Glyma16g33080.1 
          Length = 689

 Score =  474 bits (1220), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 239/311 (76%), Positives = 270/311 (86%), Gaps = 19/311 (6%)

Query: 5   WGGSNLGGNFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRVFHETSLKSKWPAGDS 64
           WGGSNLG +FP+PKEICKGLDKFVIGQ+RAKKVLSVAVYNHYKR++H T  K     G +
Sbjct: 249 WGGSNLGKDFPSPKEICKGLDKFVIGQQRAKKVLSVAVYNHYKRIYHATLQK-----GSA 303

Query: 65  SDNGNRAEAIDDDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA- 123
           +D+G  +E +DDDD VELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFV+ DATTLTQA 
Sbjct: 304 ADSG-VSEVLDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVVTDATTLTQAI 362

Query: 124 -----GYVGEDVESILYK-------LLLAADYNVAAAQQGIVYIDEVDKITKKAESLNIS 171
                 + G  V S++ +       L  AAD+NVAAAQQGI+YIDEVDKITKK++SLNIS
Sbjct: 363 VVSNCFWFGFIVGSLVLRQSFVVIDLNKAADFNVAAAQQGIIYIDEVDKITKKSKSLNIS 422

Query: 172 RDVSGEGVQHALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTIS 231
           RDVSGEGVQ ALLKMLEGT+VNVPEKGARKHPRGDNIQ+DTKNILFICGGAF+DLEKTIS
Sbjct: 423 RDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQMDTKNILFICGGAFIDLEKTIS 482

Query: 232 DRRQDSSIGFGAPVRAKMRTGGVTDSAIASSLLETVESSDLIAYGLIPEFVGRFPILVSL 291
           +RRQDSSIGFGAPVRA MR GG+TDSA+ SSLLE+VES+DLIAYGLIPEF+GRFPILVSL
Sbjct: 483 ERRQDSSIGFGAPVRANMRAGGITDSAVTSSLLESVESADLIAYGLIPEFIGRFPILVSL 542

Query: 292 SALTENQLIQV 302
           SALTE+QL+ V
Sbjct: 543 SALTEDQLMMV 553


>Glyma10g32040.1 
          Length = 413

 Score =  239 bits (610), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 125/186 (67%), Positives = 144/186 (77%), Gaps = 31/186 (16%)

Query: 138 LLAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQHALLKMLEGTVVNVPEK 197
           +  A++NV AAQQGI+YIDEVDKITKKAESLNISRDVSGEGVQ ALLKMLEGT+VNVPEK
Sbjct: 102 IFFAEFNVQAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 161

Query: 198 GARKHPRG---------------DNI------QIDTKNILFICGGAFVDLEKTISDRRQD 236
           GA KHPR                D +       IDTKNILFICGGAF++LEKTIS+RRQD
Sbjct: 162 GAWKHPRAFHPLSKYLSMSVTFNDQLITYSPSAIDTKNILFICGGAFINLEKTISERRQD 221

Query: 237 SSIGFGAPVRAKMRTGGVTDSAIASSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTE 296
           SSIGFGAPVR+ MR GG+T++A+ SSLLE+VES+DLIAYGLIP+          LSALTE
Sbjct: 222 SSIGFGAPVRSNMRAGGITNAAVTSSLLESVESADLIAYGLIPD----------LSALTE 271

Query: 297 NQLIQV 302
           +QL+QV
Sbjct: 272 DQLMQV 277



 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/49 (79%), Positives = 43/49 (87%)

Query: 3  GCWGGSNLGGNFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRVFH 51
          G  GGSNLG +FPTPKEI KGLDKFVIGQ  AKKVLSVAVYNHY+R++H
Sbjct: 14 GWVGGSNLGRDFPTPKEIFKGLDKFVIGQHMAKKVLSVAVYNHYQRIYH 62


>Glyma08g19920.1 
          Length = 791

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 6/83 (7%)

Query: 87  ILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLLAADYNVA 146
           ILL GP G GKT LA  +A    +PF    AT +  +G  G   E+I  + L A  Y  A
Sbjct: 250 ILLHGPPGCGKTKLAHAIAHETGLPFYQISATEVV-SGVSGASEENI--RELFAKAYRSA 306

Query: 147 AAQQGIVYIDEVDKITKKAESLN 169
            A   IV+IDE+D I  K E+L 
Sbjct: 307 PA---IVFIDEIDAIASKRENLQ 326


>Glyma11g02270.1 
          Length = 717

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 6/75 (8%)

Query: 87  ILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLLAADYNVA 146
           ILL GP G+GKT+LAK +AR     F+    +T+T + + GED +++     LA     A
Sbjct: 439 ILLFGPPGTGKTMLAKAIAREAGASFINVSMSTIT-SKWFGEDEKNVRALFTLA-----A 492

Query: 147 AAQQGIVYIDEVDKI 161
                I+++DEVD +
Sbjct: 493 KVSPTIIFVDEVDSM 507