Miyakogusa Predicted Gene
- Lj0g3v0290919.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0290919.1 tr|A9TIP4|A9TIP4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_93266
,34.3,3e-16,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
BTB,BTB/POZ; no description,BTB/POZ fold; BTB,BTB/P,CUFF.19442.1
(174 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g23960.1 276 7e-75
Glyma13g03460.1 270 4e-73
Glyma06g12140.1 264 3e-71
Glyma18g08140.1 194 3e-50
Glyma08g44780.1 193 8e-50
Glyma04g42630.1 67 7e-12
Glyma11g34460.2 50 2e-06
Glyma06g12440.1 49 3e-06
Glyma11g34460.1 49 4e-06
Glyma11g35860.1 48 5e-06
Glyma16g04080.1 47 8e-06
Glyma18g02550.1 47 9e-06
>Glyma14g23960.1
Length = 324
Score = 276 bits (706), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 139/174 (79%), Positives = 153/174 (87%), Gaps = 3/174 (1%)
Query: 1 MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
MLDE IHADLTI+TADGTLRAHKAVLSASS VF LY H DEKETSTIH+EDMSQ+
Sbjct: 154 MLDEAIHADLTIITADGTLRAHKAVLSASSTVFHSLYLHNG---DEKETSTIHIEDMSQE 210
Query: 61 SCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNE 120
SC ALLSYLYGTIK +DFWKHRLALLGAANK+EIGDLKDA EESLL+DL SGNVL RLN+
Sbjct: 211 SCMALLSYLYGTIKQQDFWKHRLALLGAANKYEIGDLKDASEESLLEDLNSGNVLDRLND 270
Query: 121 AWLYQLPKLKKGCFTFLFDFGKIYDVREEINNFFLLAERELMMEMFQEVLTVWK 174
A LYQL KLKKGCF++LFDFGKIYDVR+EI+ FF A+RELM+EMFQEVLT+ K
Sbjct: 271 ARLYQLHKLKKGCFSYLFDFGKIYDVRDEIDTFFRHADRELMLEMFQEVLTISK 324
>Glyma13g03460.1
Length = 324
Score = 270 bits (691), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/174 (77%), Positives = 151/174 (86%), Gaps = 3/174 (1%)
Query: 1 MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
MLDE IHADLTI+TADGTLRAHKAVLSASS V LY DEKETSTI+MEDMSQ+
Sbjct: 154 MLDEAIHADLTIITADGTLRAHKAVLSASSTVLHSLYLDNG---DEKETSTINMEDMSQE 210
Query: 61 SCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNE 120
SC ALLSYLYGTIK EDFWKHRLALLGAA+K+EIGDLKDACEESLL+DL SGNVL RLN+
Sbjct: 211 SCMALLSYLYGTIKQEDFWKHRLALLGAADKYEIGDLKDACEESLLEDLNSGNVLDRLND 270
Query: 121 AWLYQLPKLKKGCFTFLFDFGKIYDVREEINNFFLLAERELMMEMFQEVLTVWK 174
AWLYQL LKKGCF++LF +GKIYDVR+E++ FF A+RELM+EMFQEVLT+ K
Sbjct: 271 AWLYQLQALKKGCFSYLFYYGKIYDVRDEMDTFFRHADRELMLEMFQEVLTISK 324
>Glyma06g12140.1
Length = 327
Score = 264 bits (675), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/173 (75%), Positives = 150/173 (86%), Gaps = 4/173 (2%)
Query: 1 MLDEEIHADLTIVTADG-TLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQ 59
MLDE IHADLTI+TADG TLRAHKAVLSASSPVF+ ++HH EKE+STIH+EDMS
Sbjct: 154 MLDEAIHADLTIMTADGSTLRAHKAVLSASSPVFQSMFHHNL---KEKESSTIHIEDMSL 210
Query: 60 QSCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLN 119
+SC ALLSYLYG IK EDFWKHRLALLGAANK++IG LKD CEESLL+DL++GNVL LN
Sbjct: 211 ESCTALLSYLYGAIKQEDFWKHRLALLGAANKYDIGSLKDICEESLLEDLSTGNVLEMLN 270
Query: 120 EAWLYQLPKLKKGCFTFLFDFGKIYDVREEINNFFLLAERELMMEMFQEVLTV 172
EAWLYQL KLKKGC FLF FGKI+D+++EINNFF A+RELM+EMFQEVL++
Sbjct: 271 EAWLYQLHKLKKGCLVFLFQFGKIHDIKDEINNFFQHADRELMLEMFQEVLSI 323
>Glyma18g08140.1
Length = 328
Score = 194 bits (494), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 125/174 (71%), Gaps = 3/174 (1%)
Query: 1 MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
ML E IH D+TI +DG++ AH+AVL+A SPVF ++ H EKE STI++ DMS +
Sbjct: 156 MLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNL---QEKELSTINISDMSLE 212
Query: 61 SCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNE 120
SC+A L+YLYG IKHE+F HRLALL AA+K++I DLKD C ESLL+D+ + NVL RL
Sbjct: 213 SCQAFLNYLYGIIKHEEFLTHRLALLHAADKYDISDLKDVCHESLLEDIDTKNVLDRLQN 272
Query: 121 AWLYQLPKLKKGCFTFLFDFGKIYDVREEINNFFLLAERELMMEMFQEVLTVWK 174
A LYQL KLK C +L FGKIY++R++ N F A+R+L+ E+F EVL WK
Sbjct: 273 ASLYQLMKLKMSCIRYLVKFGKIYEIRDDFNTFLQNADRDLIAEVFHEVLDAWK 326
>Glyma08g44780.1
Length = 328
Score = 193 bits (490), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 124/174 (71%), Gaps = 3/174 (1%)
Query: 1 MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
ML E IH D+TI +DG++ AH+AVL+A SPVF ++ H EKE STI++ DMS +
Sbjct: 156 MLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNL---QEKELSTINISDMSLE 212
Query: 61 SCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNE 120
SC+A L YLYG IKHE+F HRLALL AA+K++I DL+D C ESLL+D+ + NVL RL
Sbjct: 213 SCQAFLYYLYGIIKHEEFLTHRLALLQAADKYDISDLRDVCHESLLEDIDTKNVLERLQN 272
Query: 121 AWLYQLPKLKKGCFTFLFDFGKIYDVREEINNFFLLAERELMMEMFQEVLTVWK 174
A LYQL KLK C +L FGKIY++R++ N F A+R+L+ E+F EVL WK
Sbjct: 273 ASLYQLMKLKMSCIRYLVKFGKIYEIRDDFNTFLRNADRDLISEVFHEVLDAWK 326
>Glyma04g42630.1
Length = 175
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 36/39 (92%), Gaps = 1/39 (2%)
Query: 1 MLDEEIHADLTIVTADG-TLRAHKAVLSASSPVFEGLYH 38
MLDE IHADLTI+TADG TLRAHKAVLSASSPVF+ +YH
Sbjct: 131 MLDEAIHADLTIMTADGSTLRAHKAVLSASSPVFQSMYH 169
>Glyma11g34460.2
Length = 382
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 1 MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
+L+ E+ D+ + +AHK +L+A SPVF + +V D + +ED+
Sbjct: 193 LLESEVGCDIVFKVKSESFKAHKLILAARSPVFRAQFF--GLVGDPTLEEVV-VEDIEPF 249
Query: 61 SCKALLSYLYG-----------TIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDL 109
KA+L ++Y ++ + LL AA+ + + LK CE L +++
Sbjct: 250 IFKAMLLFIYSDKLPGIYEVMDSMPLCSYTVMVQHLLAAADLYNLDRLKLLCESKLCEEI 309
Query: 110 TSGNVLSRLNEAWLYQLPKLKKGCFTFL---FDFGKIY 144
+ NV + L A + P+LK C F+ + G IY
Sbjct: 310 NTDNVATTLALAEQHHCPQLKAICLKFIANPANLGVIY 347
>Glyma06g12440.1
Length = 260
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 8 ADLTIVTADGT----LRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQSCK 63
AD+ +V D + + AHK +L + SPVF+ + + E+ + TI + D+S +
Sbjct: 89 ADIILVPVDDSDAVPIPAHKHLLVSRSPVFKAMLENDMA---ERRSGTIKISDISYDTLS 145
Query: 64 ALLSYLYGTIKHEDFWKHRLA--LLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNEA 121
A ++YLY E + LA LL K+++ LK CE+ L+ + +S A
Sbjct: 146 AFVNYLYTA---EASLDNELACNLLVLGEKYQVKHLKTYCEKYLIAKMNWNKAISNYAFA 202
Query: 122 WLYQLPKLKKGCFTFLFD 139
+ Y +L+ + D
Sbjct: 203 YQYNCKQLRSASLAVILD 220
>Glyma11g34460.1
Length = 415
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 1 MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
+L+ E+ D+ + +AHK +L+A SPVF + +V D + +ED+
Sbjct: 193 LLESEVGCDIVFKVKSESFKAHKLILAARSPVFRAQFF--GLVGDPTLEEVV-VEDIEPF 249
Query: 61 SCKALLSYLYG-----------TIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDL 109
KA+L ++Y ++ + LL AA+ + + LK CE L +++
Sbjct: 250 IFKAMLLFIYSDKLPGIYEVMDSMPLCSYTVMVQHLLAAADLYNLDRLKLLCESKLCEEI 309
Query: 110 TSGNVLSRLNEAWLYQLPKLKKGCFTFL 137
+ NV + L A + P+LK C F+
Sbjct: 310 NTDNVATTLALAEQHHCPQLKAICLKFI 337
>Glyma11g35860.1
Length = 284
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 5 EIHADLTIVTADG--TLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQSC 62
+IH D+ + + AHK+VL+A S +F+ + + ++ I + D++ +
Sbjct: 114 QIHTDILVSPGRNGPPIPAHKSVLAARSEIFKNMLECDEC--KAAPSNAITIPDLNHEEL 171
Query: 63 KALLSYLY-GTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNEA 121
++LL +LY GT+ E KH AL AA+K+ I L CE LL L++ N L L A
Sbjct: 172 ESLLEFLYSGTLNVEKLEKHVYALSQAADKYVIPHLLKHCERYLLSSLSTSNALETLEIA 231
Query: 122 WLYQLPKLKKGCFTFL 137
LK+ FL
Sbjct: 232 DTCSNHNLKETTLNFL 247
>Glyma16g04080.1
Length = 374
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 17/150 (11%)
Query: 1 MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
+L+ E +D+T + A+K VL A S VF+ + DD + I + DM +
Sbjct: 166 LLENEQFSDVTFTVSGERFHANKLVLVARSTVFQTEFFKGMEKDDRGD---IVVNDMEPK 222
Query: 61 SCKALLSYLYGTIKHED--------------FWKHRLALLGAANKFEIGDLKDACEESLL 106
KALL Y+Y ED LL AA K+E+ LK CE L
Sbjct: 223 VFKALLHYIYRDTLIEDEELFMLHSSLLPSLSESFPAKLLAAAEKYELPRLKLMCESVLC 282
Query: 107 DDLTSGNVLSRLNEAWLYQLPKLKKGCFTF 136
D++ +V L A Y+ +LK C F
Sbjct: 283 KDISIDSVAYILPLADRYRATELKSICLKF 312
>Glyma18g02550.1
Length = 282
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 5 EIHADLTIVTA--DGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQSC 62
+IH D+ + + AHK+VL A S +F+ + + +++I + D++ +
Sbjct: 112 QIHTDILVSPGRHGPPIPAHKSVLGARSEIFKNMLECDEC--KAAPSNSITIPDLNHEEL 169
Query: 63 KALLSYLY-GTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNEA 121
++LL +LY GT+ E KH AL AA+K+ I L CE LL L++ N L L A
Sbjct: 170 ESLLEFLYSGTLGVEKLEKHVYALSQAADKYVIPHLLKHCERYLLSSLSTSNALETLEIA 229
Query: 122 WLYQLPKLKKGCFTFL 137
LK+ FL
Sbjct: 230 DTCSNHNLKETTLNFL 245