Miyakogusa Predicted Gene

Lj0g3v0290909.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0290909.1 Non Chatacterized Hit- tr|I3S268|I3S268_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,V_ATP_synt_C: V-type ATPase, C subunit,ATPase, V0 complex,
proteolipid subunit C, eukaryotic; no des,CUFF.19441.1
         (164 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g23990.1                                                       221   2e-58
Glyma13g03470.1                                                       221   2e-58
Glyma01g37320.1                                                       221   2e-58
Glyma16g24220.1                                                       219   8e-58
Glyma06g00980.1                                                       219   8e-58
Glyma04g00950.1                                                       219   8e-58
Glyma02g05630.1                                                       219   8e-58
Glyma11g07980.1                                                       219   1e-57
Glyma12g04090.1                                                       218   2e-57
Glyma11g11760.1                                                       218   2e-57
Glyma04g00950.2                                                       197   3e-51
Glyma12g04090.2                                                       197   4e-51
Glyma11g11760.2                                                       165   2e-41
Glyma02g05630.2                                                       165   2e-41
Glyma20g02300.1                                                        80   9e-16
Glyma17g31060.1                                                        53   2e-07

>Glyma14g23990.1 
          Length = 164

 Score =  221 bits (564), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/164 (73%), Positives = 122/164 (74%)

Query: 1   MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
           MAGFSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1   MAGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60

Query: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGV
Sbjct: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120

Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
           RANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164


>Glyma13g03470.1 
          Length = 164

 Score =  221 bits (564), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/164 (73%), Positives = 122/164 (74%)

Query: 1   MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
           MAGFSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1   MAGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60

Query: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGV
Sbjct: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120

Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
           RANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164


>Glyma01g37320.1 
          Length = 164

 Score =  221 bits (564), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/164 (73%), Positives = 122/164 (74%)

Query: 1   MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
           MAGFSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1   MAGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60

Query: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGV
Sbjct: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLSCGLAGLSAGMAIGIVGDAGV 120

Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
           RANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164


>Glyma16g24220.1 
          Length = 164

 Score =  219 bits (559), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 120/164 (73%), Positives = 121/164 (73%)

Query: 1   MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
           MA FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1   MAAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60

Query: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGV
Sbjct: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120

Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
           RANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164


>Glyma06g00980.1 
          Length = 164

 Score =  219 bits (559), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 120/164 (73%), Positives = 121/164 (73%)

Query: 1   MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
           MA FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1   MAAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60

Query: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGV
Sbjct: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120

Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
           RANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164


>Glyma04g00950.1 
          Length = 164

 Score =  219 bits (559), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 120/164 (73%), Positives = 121/164 (73%)

Query: 1   MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
           MA FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1   MAAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60

Query: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGV
Sbjct: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120

Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
           RANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164


>Glyma02g05630.1 
          Length = 164

 Score =  219 bits (559), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 120/164 (73%), Positives = 121/164 (73%)

Query: 1   MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
           MA FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1   MAAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60

Query: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGV
Sbjct: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120

Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
           RANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164


>Glyma11g07980.1 
          Length = 164

 Score =  219 bits (558), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/164 (73%), Positives = 121/164 (73%)

Query: 1   MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
           M GFSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1   MPGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60

Query: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGV
Sbjct: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120

Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
           RANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164


>Glyma12g04090.1 
          Length = 164

 Score =  218 bits (555), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 120/164 (73%), Positives = 121/164 (73%)

Query: 1   MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
           MA FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1   MAPFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60

Query: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGV
Sbjct: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120

Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
           RANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164


>Glyma11g11760.1 
          Length = 164

 Score =  218 bits (555), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 120/164 (73%), Positives = 121/164 (73%)

Query: 1   MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
           MA FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1   MAPFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60

Query: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGV
Sbjct: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120

Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
           RANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164


>Glyma04g00950.2 
          Length = 138

 Score =  197 bits (502), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 108/138 (78%), Positives = 109/138 (78%)

Query: 27  MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSY 86
           MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSY
Sbjct: 1   MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSY 60

Query: 87  YLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXY 146
           YLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            Y
Sbjct: 61  YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALY 120

Query: 147 GLIVGIILSSRAGQSRAE 164
           GLIVGIILSSRAGQSRA+
Sbjct: 121 GLIVGIILSSRAGQSRAD 138


>Glyma12g04090.2 
          Length = 142

 Score =  197 bits (501), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 108/138 (78%), Positives = 109/138 (78%)

Query: 27  MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSY 86
           MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSY
Sbjct: 5   MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSY 64

Query: 87  YLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXY 146
           YLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            Y
Sbjct: 65  YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALY 124

Query: 147 GLIVGIILSSRAGQSRAE 164
           GLIVGIILSSRAGQSRA+
Sbjct: 125 GLIVGIILSSRAGQSRAD 142


>Glyma11g11760.2 
          Length = 141

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 92/125 (73%)

Query: 1   MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
           MA FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1   MAPFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60

Query: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGV
Sbjct: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120

Query: 121 RANAQ 125
           R N+ 
Sbjct: 121 RYNSS 125


>Glyma02g05630.2 
          Length = 145

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/121 (74%), Positives = 90/121 (74%)

Query: 1   MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
           MA FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1   MAAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60

Query: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGV
Sbjct: 61  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120

Query: 121 R 121
           R
Sbjct: 121 R 121


>Glyma20g02300.1 
          Length = 105

 Score = 80.1 bits (196), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 57/95 (60%), Gaps = 20/95 (21%)

Query: 27  MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSY 86
           MGA YGT KSGVGVAS+GVMR ELVMKSIVPVVM GVLGIYGLII   +S+G+       
Sbjct: 13  MGATYGTTKSGVGVASIGVMRSELVMKSIVPVVMVGVLGIYGLIIVAQLSSGL------- 65

Query: 87  YLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 121
                                  MAIGIVG+AGV 
Sbjct: 66  -------------ACGLVGLSAGMAIGIVGNAGVS 87


>Glyma17g31060.1 
          Length = 176

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 5/139 (3%)

Query: 25  SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGIN--PK 82
           S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A+I+ T +   P 
Sbjct: 32  SVLGAAWGIYITGSSLIGAAIRAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPA 91

Query: 83  AKSY---YLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXX 139
           +  Y    L  GY                 + +GI+G +   ++AQ   LFV +      
Sbjct: 92  SNIYAPESLRAGYAIFASGLIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIF 151

Query: 140 XXXXXXYGLIVGIILSSRA 158
                 +G+IVGII+S++A
Sbjct: 152 GSALGLFGVIVGIIMSAQA 170