Miyakogusa Predicted Gene

Lj0g3v0290549.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0290549.1 Non Chatacterized Hit- tr|Q9FIV5|Q9FIV5_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At5,34.29,0.0000000002,seg,NULL; coiled-coil,NULL,CUFF.19420.1
         (162 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g05430.1                                                        82   3e-16

>Glyma18g05430.1 
          Length = 143

 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 74/132 (56%), Gaps = 4/132 (3%)

Query: 31  QYPNQYEFLKQELRTFILELQNSKHQDSELLPQNNHCNXXXXXXXXXXXXXXXXQVKKSN 90
           QYPN +E LK ELR+FI +LQ + H DSE LP+NN+ +                  K+S+
Sbjct: 16  QYPNHHEHLKNELRSFIFQLQ-TNHHDSEQLPENNNFSTHLAFFDTEESTSLEELRKRSD 74

Query: 91  CGGTELALEADRDVMQGKVDESSELESLKAVVKEQNXXXXXXXXXXXXXXXERAQNCLKK 150
               EL L ADR V++ K+D SS+LE+ K+VV +                 ERAQ CLKK
Sbjct: 75  Y-DLELGL-ADRVVIE-KIDGSSKLETPKSVVVKHFSSRKNKRKDRVDLVLERAQVCLKK 131

Query: 151 LQHLKTSLLSPS 162
           ++HLKT LL PS
Sbjct: 132 IKHLKTFLLPPS 143