Miyakogusa Predicted Gene
- Lj0g3v0290509.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0290509.1 tr|E5GBE5|E5GBE5_CUCME Nucleotide binding protein
OS=Cucumis melo subsp. melo PE=4 SV=1,26,2e-18,no
description,WD40/YVTN repeat-like-containing domain; WD40
repeat-like,WD40-repeat-containing doma,CUFF.19429.1
(455 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g22050.1 756 0.0
Glyma09g33060.1 733 0.0
Glyma11g09120.1 713 0.0
Glyma11g09120.2 711 0.0
Glyma11g09120.3 711 0.0
Glyma01g36310.1 288 6e-78
Glyma02g42480.1 60 4e-09
>Glyma16g22050.1
Length = 994
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/463 (80%), Positives = 411/463 (88%), Gaps = 11/463 (2%)
Query: 1 MGASDYASSKLLQVVLLNEHTESRTIKLGLHLSESCIDMEIISPSASADQSKQKQDLFLI 60
MGASD A+S LLQVVLLNEHTE+RTIKLGLHLSE CIDMEIIS S +QSK KQD F++
Sbjct: 251 MGASDCATSNLLQVVLLNEHTEARTIKLGLHLSECCIDMEIIS--TSTEQSKNKQDSFIL 308
Query: 61 LGKSGHLHLYDDSLIERYLLQCQSKSAPSFPKEVIVKIPLADSSITTSKFITNNPNMLLN 120
LGKSGHL+LYDD LIERYLLQCQSKS PS PKEV VK+PLA+SSITT+KFI+NNPN +L
Sbjct: 309 LGKSGHLYLYDDILIERYLLQCQSKSTPSLPKEVTVKLPLAESSITTAKFISNNPN-VLT 367
Query: 121 SEDEYYMQLVKNHPLFAPVETNQKDGMS----KFTGFSKVQNLYITGHNNGAINFWDASC 176
EDEYY QL+ ++PLF PVETNQKD +S KFTGFSKVQNLYITGH+NGAINFWDASC
Sbjct: 368 FEDEYYRQLITSYPLFVPVETNQKDEISLSSAKFTGFSKVQNLYITGHSNGAINFWDASC 427
Query: 177 PFFTPILQLKQQSENDFSLSGIPLTALYFDSNSPLLVSGDQSGTVRIFRFKPEPYATNSF 236
P FTPILQLKQQSEND SLSGIPLTALYFDSNSPLLVSGDQSG V +FRFK EPYATNSF
Sbjct: 428 PIFTPILQLKQQSENDCSLSGIPLTALYFDSNSPLLVSGDQSGMVCVFRFKTEPYATNSF 487
Query: 237 MSLTGGTKKGTDHIIQSVKLVKVNSAILSMNIDHSSMHLAVGSDQGYVSVFNLDGPTLLY 296
MSLTGGTKKGTDHIIQSVK VK+N AILS+NID S MHLAVGSDQG+VSVFN+DGPTLLY
Sbjct: 488 MSLTGGTKKGTDHIIQSVKHVKINGAILSLNIDPSLMHLAVGSDQGHVSVFNIDGPTLLY 547
Query: 297 SKHIASEISSGIISLQSLTCSLNGFDKNILAVVTKDSSVLALDNETGNPLSTGTVHPKKP 356
KHIASEIS+GIISLQ LT SL+GF+KNILAV TKDSSVLALD E GN L TGT+HPKKP
Sbjct: 548 QKHIASEISAGIISLQFLTSSLHGFEKNILAVGTKDSSVLALDKEAGNTLGTGTIHPKKP 607
Query: 357 AKALFMQVLGGQAEP----IAKNGVDSSEGNHIEDATTKQLYILLCSEKALYVYSLTHAV 412
+KALFMQVL GQ P I K+G++SSE NHIEDATTKQ YILLCSEKALYVYSL HA+
Sbjct: 608 SKALFMQVLDGQGAPVNGSITKDGLESSERNHIEDATTKQQYILLCSEKALYVYSLVHAI 667
Query: 413 QGVKKVLYKKKFNSSSCCWASTFYSPSDIGLLLLFTSGKIELR 455
QGVKKVLYKK+F+SS+CCWASTFYSPSD+GL+L+FTSGK+ELR
Sbjct: 668 QGVKKVLYKKRFHSSTCCWASTFYSPSDVGLILIFTSGKVELR 710
>Glyma09g33060.1
Length = 1042
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/470 (78%), Positives = 405/470 (86%), Gaps = 26/470 (5%)
Query: 1 MGASDYASSKLLQVVLLNEHTESRTIKLGLHLSESCIDMEIISPSASADQSKQKQDLFLI 60
MGASD+A+S LLQVVLLNE TE+RTIKLGLHLSE CIDMEIIS S +QSK KQD F++
Sbjct: 289 MGASDFATSNLLQVVLLNEQTEARTIKLGLHLSECCIDMEIIS--TSTEQSKNKQDSFIL 346
Query: 61 LGKSGHLHLYDDSLIERYLLQCQSKSAPSFPKEVIVKIPLADSSITTSKFITNNPNMLLN 120
LGKSGHL+LYDDSLIERYL+QCQSKS PS PKEVIVK+PLA+SSITT+KFI+NNPNML
Sbjct: 347 LGKSGHLYLYDDSLIERYLIQCQSKSTPSLPKEVIVKLPLAESSITTAKFISNNPNML-T 405
Query: 121 SEDEYYMQLVKNHPLFAPVETNQKDGMS----KFTGFSKVQNLYITGHNNGAINFWDASC 176
SEDEYY QL+KN PLF PVETNQKDG+S KFTGFS VQNLYITGH+NG I FWDASC
Sbjct: 406 SEDEYYRQLIKNCPLFVPVETNQKDGISLSSAKFTGFSNVQNLYITGHSNGTITFWDASC 465
Query: 177 PFFTPILQLKQQSENDFSLSGIPLTALYFDSNSPLLVSGDQSGTVRIFRFKPEPYATNSF 236
P FTPILQLKQQSEND SLSGIPLTALYF+SNS LLVSGDQ G V IFRFKPEPYATNSF
Sbjct: 466 PIFTPILQLKQQSENDCSLSGIPLTALYFNSNSLLLVSGDQCGMVCIFRFKPEPYATNSF 525
Query: 237 MSLT-----------GGTKKGTDHIIQSVKLVKVNSAILSMNIDHSSMHLAVGSDQGYVS 285
+SLT GGTKKGTDHIIQSVK VK N AILS+NID SSMHLAVGSDQG+VS
Sbjct: 526 LSLTVNTSLFHSFFTGGTKKGTDHIIQSVKRVKSNGAILSLNIDPSSMHLAVGSDQGHVS 585
Query: 286 VFNLDGPTLLYSKHIASEISSGIISLQSLTCSLNGFDKNILAVVTKDSSVLALDNETGNP 345
VFN+DGPTLLY KHIASEIS+GIISLQ LT SL+GF NILAV TKDSSVLALD ETGN
Sbjct: 586 VFNIDGPTLLYQKHIASEISAGIISLQFLTSSLHGFGTNILAVGTKDSSVLALDKETGNT 645
Query: 346 LSTGTVHPKKPAKALFMQVLGGQAEPIAKNGVDSSEGNHIEDATTKQLYILLCSEKALYV 405
L TGT+HPKKP+KALFMQVL ++G++ SE NHIEDATTKQLYILLCSEKALYV
Sbjct: 646 LGTGTIHPKKPSKALFMQVL--------EDGLELSERNHIEDATTKQLYILLCSEKALYV 697
Query: 406 YSLTHAVQGVKKVLYKKKFNSSSCCWASTFYSPSDIGLLLLFTSGKIELR 455
YSL HA+QGVKKVLYKKKF+SS+CCWASTF SPSD+GL+L+FTSGK+ELR
Sbjct: 698 YSLVHAIQGVKKVLYKKKFHSSTCCWASTFCSPSDVGLILIFTSGKVELR 747
>Glyma11g09120.1
Length = 1052
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/463 (75%), Positives = 395/463 (85%), Gaps = 14/463 (3%)
Query: 1 MGASDYASSKLLQVVLLNEHTESRTIKLGLHLSESCIDMEIISPSASADQSKQKQDLFLI 60
MG SDYA S LLQVVLLNEHTESRTIK+GLHL E CIDMEIIS S SK +Q+ F++
Sbjct: 313 MGGSDYAPSNLLQVVLLNEHTESRTIKMGLHLPEGCIDMEIISTS-----SKHRQNYFIL 367
Query: 61 LGKSGHLHLYDDSLIERYLLQCQSKSAPSFPKEVIVKIPLADSSITTSKFITNNPNMLLN 120
LGKSGH++LYDD+LIERYLLQ QSKS+PS PKEV+VK+PLADS+ITT+KFI+NN N +
Sbjct: 368 LGKSGHVYLYDDNLIERYLLQSQSKSSPSLPKEVVVKLPLADSNITTAKFISNNSN-FFS 426
Query: 121 SEDEYYMQLVKNHPLFAPVETNQKDGM----SKFTGFSKVQNLYITGHNNGAINFWDASC 176
SEDEYY QLVKN+P P+ETN KDG+ S FTGFS ++N+YITGH+NGAINFWDA+C
Sbjct: 427 SEDEYYNQLVKNYPPLVPIETNLKDGINFSSSNFTGFSNIRNMYITGHSNGAINFWDATC 486
Query: 177 PFFTPILQLKQQSENDFSLSGIPLTALYFDSNSPLLVSGDQSGTVRIFRFKPEPYATNSF 236
PFFTPILQLKQQSENDFSLSGIPLT LYFDSNSPLL SGDQSG VRI+RFKPEPYA+NSF
Sbjct: 487 PFFTPILQLKQQSENDFSLSGIPLTELYFDSNSPLLFSGDQSGMVRIYRFKPEPYASNSF 546
Query: 237 MSLTGGTKKGTDHIIQSVKLVKVNSAILSMNIDHSSMHLAVGSDQGYVSVFNLDGPTLLY 296
MSLTGGTKKGTDH+I S+KL+K + ++ MNIDHSS HLAVGSDQG VSV N+DGP+LLY
Sbjct: 547 MSLTGGTKKGTDHVIHSMKLIKTSGTVICMNIDHSSRHLAVGSDQGNVSVINIDGPSLLY 606
Query: 297 SKHIASEISSGIISLQSLTCSLNGFDKNILAVVTKDSSVLALDNETGNPLSTGTVHPKKP 356
KHIASEIS+GIISLQ TCSL+GF+KNILAV TKDSSVL LD ETGN LS GT+HPKKP
Sbjct: 607 RKHIASEISTGIISLQFKTCSLHGFEKNILAVGTKDSSVLTLDGETGNTLSIGTIHPKKP 666
Query: 357 AKALFMQVLGGQAEPIA----KNGVDSSEGNHIEDATTKQLYILLCSEKALYVYSLTHAV 412
+KA+FMQVL GQ E A K+G++ EG HIEDAT KQLYILLCSEKALYVYS HAV
Sbjct: 667 SKAIFMQVLDGQGEQTAGSVTKDGLELKEGIHIEDATAKQLYILLCSEKALYVYSFAHAV 726
Query: 413 QGVKKVLYKKKFNSSSCCWASTFYSPSDIGLLLLFTSGKIELR 455
QGVKKVLYKKKF+SSSCCWAST S SDI L+LLF SGK+ELR
Sbjct: 727 QGVKKVLYKKKFHSSSCCWASTINSLSDIRLILLFASGKVELR 769
>Glyma11g09120.2
Length = 1000
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/463 (75%), Positives = 395/463 (85%), Gaps = 14/463 (3%)
Query: 1 MGASDYASSKLLQVVLLNEHTESRTIKLGLHLSESCIDMEIISPSASADQSKQKQDLFLI 60
MG SDYA S LLQVVLLNEHTESRTIK+GLHL E CIDMEIIS S SK +Q+ F++
Sbjct: 313 MGGSDYAPSNLLQVVLLNEHTESRTIKMGLHLPEGCIDMEIISTS-----SKHRQNYFIL 367
Query: 61 LGKSGHLHLYDDSLIERYLLQCQSKSAPSFPKEVIVKIPLADSSITTSKFITNNPNMLLN 120
LGKSGH++LYDD+LIERYLLQ QSKS+PS PKEV+VK+PLADS+ITT+KFI+NN N +
Sbjct: 368 LGKSGHVYLYDDNLIERYLLQSQSKSSPSLPKEVVVKLPLADSNITTAKFISNNSN-FFS 426
Query: 121 SEDEYYMQLVKNHPLFAPVETNQKDGM----SKFTGFSKVQNLYITGHNNGAINFWDASC 176
SEDEYY QLVKN+P P+ETN KDG+ S FTGFS ++N+YITGH+NGAINFWDA+C
Sbjct: 427 SEDEYYNQLVKNYPPLVPIETNLKDGINFSSSNFTGFSNIRNMYITGHSNGAINFWDATC 486
Query: 177 PFFTPILQLKQQSENDFSLSGIPLTALYFDSNSPLLVSGDQSGTVRIFRFKPEPYATNSF 236
PFFTPILQLKQQSENDFSLSGIPLT LYFDSNSPLL SGDQSG VRI+RFKPEPYA+NSF
Sbjct: 487 PFFTPILQLKQQSENDFSLSGIPLTELYFDSNSPLLFSGDQSGMVRIYRFKPEPYASNSF 546
Query: 237 MSLTGGTKKGTDHIIQSVKLVKVNSAILSMNIDHSSMHLAVGSDQGYVSVFNLDGPTLLY 296
MSLTGGTKKGTDH+I S+KL+K + ++ MNIDHSS HLAVGSDQG VSV N+DGP+LLY
Sbjct: 547 MSLTGGTKKGTDHVIHSMKLIKTSGTVICMNIDHSSRHLAVGSDQGNVSVINIDGPSLLY 606
Query: 297 SKHIASEISSGIISLQSLTCSLNGFDKNILAVVTKDSSVLALDNETGNPLSTGTVHPKKP 356
KHIASEIS+GIISLQ TCSL+GF+KNILAV TKDSSVL LD ETGN LS GT+HPKKP
Sbjct: 607 RKHIASEISTGIISLQFKTCSLHGFEKNILAVGTKDSSVLTLDGETGNTLSIGTIHPKKP 666
Query: 357 AKALFMQVLGGQAEPIA----KNGVDSSEGNHIEDATTKQLYILLCSEKALYVYSLTHAV 412
+KA+FMQVL GQ E A K+G++ EG HIEDAT KQLYILLCSEKALYVYS HAV
Sbjct: 667 SKAIFMQVLDGQGEQTAGSVTKDGLELKEGIHIEDATAKQLYILLCSEKALYVYSFAHAV 726
Query: 413 QGVKKVLYKKKFNSSSCCWASTFYSPSDIGLLLLFTSGKIELR 455
QGVKKVLYKKKF+SSSCCWAST S SDI L+LLF SGK+ELR
Sbjct: 727 QGVKKVLYKKKFHSSSCCWASTINSLSDIRLILLFASGKVELR 769
>Glyma11g09120.3
Length = 961
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/463 (75%), Positives = 395/463 (85%), Gaps = 14/463 (3%)
Query: 1 MGASDYASSKLLQVVLLNEHTESRTIKLGLHLSESCIDMEIISPSASADQSKQKQDLFLI 60
MG SDYA S LLQVVLLNEHTESRTIK+GLHL E CIDMEIIS S SK +Q+ F++
Sbjct: 313 MGGSDYAPSNLLQVVLLNEHTESRTIKMGLHLPEGCIDMEIISTS-----SKHRQNYFIL 367
Query: 61 LGKSGHLHLYDDSLIERYLLQCQSKSAPSFPKEVIVKIPLADSSITTSKFITNNPNMLLN 120
LGKSGH++LYDD+LIERYLLQ QSKS+PS PKEV+VK+PLADS+ITT+KFI+NN N +
Sbjct: 368 LGKSGHVYLYDDNLIERYLLQSQSKSSPSLPKEVVVKLPLADSNITTAKFISNNSN-FFS 426
Query: 121 SEDEYYMQLVKNHPLFAPVETNQKDGM----SKFTGFSKVQNLYITGHNNGAINFWDASC 176
SEDEYY QLVKN+P P+ETN KDG+ S FTGFS ++N+YITGH+NGAINFWDA+C
Sbjct: 427 SEDEYYNQLVKNYPPLVPIETNLKDGINFSSSNFTGFSNIRNMYITGHSNGAINFWDATC 486
Query: 177 PFFTPILQLKQQSENDFSLSGIPLTALYFDSNSPLLVSGDQSGTVRIFRFKPEPYATNSF 236
PFFTPILQLKQQSENDFSLSGIPLT LYFDSNSPLL SGDQSG VRI+RFKPEPYA+NSF
Sbjct: 487 PFFTPILQLKQQSENDFSLSGIPLTELYFDSNSPLLFSGDQSGMVRIYRFKPEPYASNSF 546
Query: 237 MSLTGGTKKGTDHIIQSVKLVKVNSAILSMNIDHSSMHLAVGSDQGYVSVFNLDGPTLLY 296
MSLTGGTKKGTDH+I S+KL+K + ++ MNIDHSS HLAVGSDQG VSV N+DGP+LLY
Sbjct: 547 MSLTGGTKKGTDHVIHSMKLIKTSGTVICMNIDHSSRHLAVGSDQGNVSVINIDGPSLLY 606
Query: 297 SKHIASEISSGIISLQSLTCSLNGFDKNILAVVTKDSSVLALDNETGNPLSTGTVHPKKP 356
KHIASEIS+GIISLQ TCSL+GF+KNILAV TKDSSVL LD ETGN LS GT+HPKKP
Sbjct: 607 RKHIASEISTGIISLQFKTCSLHGFEKNILAVGTKDSSVLTLDGETGNTLSIGTIHPKKP 666
Query: 357 AKALFMQVLGGQAEPIA----KNGVDSSEGNHIEDATTKQLYILLCSEKALYVYSLTHAV 412
+KA+FMQVL GQ E A K+G++ EG HIEDAT KQLYILLCSEKALYVYS HAV
Sbjct: 667 SKAIFMQVLDGQGEQTAGSVTKDGLELKEGIHIEDATAKQLYILLCSEKALYVYSFAHAV 726
Query: 413 QGVKKVLYKKKFNSSSCCWASTFYSPSDIGLLLLFTSGKIELR 455
QGVKKVLYKKKF+SSSCCWAST S SDI L+LLF SGK+ELR
Sbjct: 727 QGVKKVLYKKKFHSSSCCWASTINSLSDIRLILLFASGKVELR 769
>Glyma01g36310.1
Length = 252
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 164/294 (55%), Positives = 197/294 (67%), Gaps = 48/294 (16%)
Query: 31 HLSESCIDMEIISPSASADQSKQKQDLFLILGKSGHLHLYDDSLIERYLLQCQSKSAPSF 90
HLSE CIDMEIIS S SK +Q+ F++LGKSGH++ YDD+LIERY LQ QSKS PS
Sbjct: 4 HLSEGCIDMEIISTS-----SKHRQNYFILLGKSGHVYQYDDNLIERYPLQNQSKSTPSL 58
Query: 91 PKEVIVKIPLADSSITTSKFITNNPNMLLNSEDEYYMQLVKNHPLFAPVETNQKDGMSKF 150
PKEV+VK+PLADSSITT+KFI+NNPN L SEDE S F
Sbjct: 59 PKEVVVKLPLADSSITTAKFISNNPN-LFTSEDEVLCS-------------------SNF 98
Query: 151 TGFSKVQNLYITGHNNGAINFWDASCPFFTPILQLKQQSENDFSLSGIPLTALYFDSNSP 210
FS ++ LYITGH+NGAINFWDASCPFFTP+LQLKQQ L L + FDSN+P
Sbjct: 99 AVFSNIKKLYITGHSNGAINFWDASCPFFTPVLQLKQQQM--IFLKWYTLDRIIFDSNTP 156
Query: 211 LLVSGDQSGTVRIFRFKPEPYATNSFMSLTGGTKKGTDHI-IQSVKLVKVNSAILSMNID 269
LLVSGDQSGTVRI+RFKPEPYA+NSFM +T D I ++S+ +I+
Sbjct: 157 LLVSGDQSGTVRIYRFKPEPYASNSFMPITYCV--ACDFITLRSI-------GDYQGSIE 207
Query: 270 HSSMHLAVGSDQGYVSVFNLDGPTLLYSKHIASEISSGIISLQSLTCSLNGFDK 323
H S +SV N+DGP+LLY K+IA EIS+GI+SLQ TCSL+GF+K
Sbjct: 208 HIS-----------ISVINIDGPSLLYRKNIAIEISTGIVSLQFKTCSLHGFEK 250
>Glyma02g42480.1
Length = 477
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 325 ILAVVTKDSSVLALDNETGNPLSTGTVHPKKPAKALFMQVLGGQAEPIAKNGVDS----- 379
++ V+T+D +A+D TGN + T+ P + + M ++ G ++ + S
Sbjct: 53 LVYVMTRDEHFVAIDTMTGNMACSRTMSPSVKSNVISMHIIDGSTSDLSAEKLTSTSPQK 112
Query: 380 ----------SEGNHIED---ATTKQLY---------ILLCSEKALYVYSLTHAVQGVKK 417
SE +ED T + Y ILLC E L ++SL ++G K
Sbjct: 113 SDSGMQANIQSENAQVEDESAVTVENSYFGQIISNSLILLCYENELSLHSLNFVIEGSSK 172
Query: 418 VLYKKKFN-SSSCCWASTFY-SPSDIGLLLLFTSGKIELR 455
Y +K N CCW +TF + L+LL+ SG IELR
Sbjct: 173 --YIRKVNLVQRCCWTTTFKKDEKECVLVLLYQSGDIELR 210