Miyakogusa Predicted Gene

Lj0g3v0290499.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0290499.1 Non Chatacterized Hit- tr|A5BTB8|A5BTB8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,56.07,2e-19,seg,NULL; CHD5,CHD5-like protein;
coiled-coil,NULL,CUFF.19418.1
         (174 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g33080.4                                                       274   4e-74
Glyma09g33080.3                                                       274   4e-74
Glyma09g33080.1                                                       274   4e-74
Glyma01g36330.1                                                       201   3e-52
Glyma09g33080.2                                                       145   3e-35

>Glyma09g33080.4 
          Length = 175

 Score =  274 bits (700), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 135/175 (77%), Positives = 145/175 (82%), Gaps = 1/175 (0%)

Query: 1   MGDGASEGHQRSLAAPLIFFVVIAFQFASHWIDQFKKSG-DNGKEIQLRGEIKQLLKEAN 59
           MGD ASE HQRSLAAP IFFVV+AFQFASHWID FKKSG D  KE +LRGEIK+LLKEA+
Sbjct: 1   MGDEASEEHQRSLAAPFIFFVVLAFQFASHWIDHFKKSGSDKEKETKLRGEIKELLKEAS 60

Query: 60  SLSQPSTYXXXXXXXXXXXXXXXXLAKCHNLHDKDTALYSNVLLVSKVLTYLILLIWFWS 119
           SLSQPST+                LAKC NLH KD ALYS VLL+SKVLTYLILLIWFWS
Sbjct: 61  SLSQPSTFAQAAKLKRLAAAKERELAKCQNLHHKDDALYSKVLLISKVLTYLILLIWFWS 120

Query: 120 APVASISQQLVQPFGRLLSWRTGGVQNNNIMVGIIPWLVVCSRVSRFICRLTYGK 174
            PV+SISQQLVQPFGRLLSWRTGGVQN+NIMVGIIPWL+V +RVSRFICRLTYGK
Sbjct: 121 VPVSSISQQLVQPFGRLLSWRTGGVQNSNIMVGIIPWLIVSTRVSRFICRLTYGK 175


>Glyma09g33080.3 
          Length = 175

 Score =  274 bits (700), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 135/175 (77%), Positives = 145/175 (82%), Gaps = 1/175 (0%)

Query: 1   MGDGASEGHQRSLAAPLIFFVVIAFQFASHWIDQFKKSG-DNGKEIQLRGEIKQLLKEAN 59
           MGD ASE HQRSLAAP IFFVV+AFQFASHWID FKKSG D  KE +LRGEIK+LLKEA+
Sbjct: 1   MGDEASEEHQRSLAAPFIFFVVLAFQFASHWIDHFKKSGSDKEKETKLRGEIKELLKEAS 60

Query: 60  SLSQPSTYXXXXXXXXXXXXXXXXLAKCHNLHDKDTALYSNVLLVSKVLTYLILLIWFWS 119
           SLSQPST+                LAKC NLH KD ALYS VLL+SKVLTYLILLIWFWS
Sbjct: 61  SLSQPSTFAQAAKLKRLAAAKERELAKCQNLHHKDDALYSKVLLISKVLTYLILLIWFWS 120

Query: 120 APVASISQQLVQPFGRLLSWRTGGVQNNNIMVGIIPWLVVCSRVSRFICRLTYGK 174
            PV+SISQQLVQPFGRLLSWRTGGVQN+NIMVGIIPWL+V +RVSRFICRLTYGK
Sbjct: 121 VPVSSISQQLVQPFGRLLSWRTGGVQNSNIMVGIIPWLIVSTRVSRFICRLTYGK 175


>Glyma09g33080.1 
          Length = 175

 Score =  274 bits (700), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 135/175 (77%), Positives = 145/175 (82%), Gaps = 1/175 (0%)

Query: 1   MGDGASEGHQRSLAAPLIFFVVIAFQFASHWIDQFKKSG-DNGKEIQLRGEIKQLLKEAN 59
           MGD ASE HQRSLAAP IFFVV+AFQFASHWID FKKSG D  KE +LRGEIK+LLKEA+
Sbjct: 1   MGDEASEEHQRSLAAPFIFFVVLAFQFASHWIDHFKKSGSDKEKETKLRGEIKELLKEAS 60

Query: 60  SLSQPSTYXXXXXXXXXXXXXXXXLAKCHNLHDKDTALYSNVLLVSKVLTYLILLIWFWS 119
           SLSQPST+                LAKC NLH KD ALYS VLL+SKVLTYLILLIWFWS
Sbjct: 61  SLSQPSTFAQAAKLKRLAAAKERELAKCQNLHHKDDALYSKVLLISKVLTYLILLIWFWS 120

Query: 120 APVASISQQLVQPFGRLLSWRTGGVQNNNIMVGIIPWLVVCSRVSRFICRLTYGK 174
            PV+SISQQLVQPFGRLLSWRTGGVQN+NIMVGIIPWL+V +RVSRFICRLTYGK
Sbjct: 121 VPVSSISQQLVQPFGRLLSWRTGGVQNSNIMVGIIPWLIVSTRVSRFICRLTYGK 175


>Glyma01g36330.1 
          Length = 174

 Score =  201 bits (512), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 104/175 (59%), Positives = 123/175 (70%), Gaps = 2/175 (1%)

Query: 1   MGDGASEGHQRSLAAPLIFFVVIAFQFASHWIDQFKKSG-DNGKEIQLRGEIKQLLKEAN 59
           MGD AS+  +RSLAAPLIF +V AFQFA + +D  KKSG D+ KEIQLR EIKQLLKEAN
Sbjct: 1   MGDEASQERERSLAAPLIFLIVAAFQFAYYCLDHVKKSGSDSEKEIQLRAEIKQLLKEAN 60

Query: 60  SLSQPSTYXXXXXXXXXXXXXXXXLAKCHNLHDKDTALYSNVLLVSKVLTYLILLIWFWS 119
           S+SQPST+                L+K  N   KD A Y+ VLL+ K LTY +LLIWFW 
Sbjct: 61  SMSQPSTFAQAAKLKRLAVAKERELSKYQNSCHKDDASYAKVLLILKYLTYGVLLIWFWR 120

Query: 120 APVASISQQLVQPFGRLLSWRTGGVQNNNIMVGIIPWLVVCSRVSRFICRLTYGK 174
            PVASIS QLVQPFG LLSW+T GVQNN++ +GII WL+V +RV RF+ R  Y K
Sbjct: 121 VPVASISLQLVQPFGSLLSWKTRGVQNNSVTIGIISWLIVSARVCRFV-RRAYSK 174


>Glyma09g33080.2 
          Length = 153

 Score =  145 bits (365), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 74/109 (67%), Positives = 80/109 (73%), Gaps = 1/109 (0%)

Query: 1   MGDGASEGHQRSLAAPLIFFVVIAFQFASHWIDQFKKSG-DNGKEIQLRGEIKQLLKEAN 59
           MGD ASE HQRSLAAP IFFVV+AFQFASHWID FKKSG D  KE +LRGEIK+LLKEA+
Sbjct: 1   MGDEASEEHQRSLAAPFIFFVVLAFQFASHWIDHFKKSGSDKEKETKLRGEIKELLKEAS 60

Query: 60  SLSQPSTYXXXXXXXXXXXXXXXXLAKCHNLHDKDTALYSNVLLVSKVL 108
           SLSQPST+                LAKC NLH KD ALYS VLL+SK L
Sbjct: 61  SLSQPSTFAQAAKLKRLAAAKERELAKCQNLHHKDDALYSKVLLISKRL 109