Miyakogusa Predicted Gene

Lj0g3v0290399.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0290399.1 tr|C1JXM3|C1JXM3_LIZAU RAD1-like protein OS=Liza
aurata GN=rad1 PE=2 SV=1,26.97,3e-18,no description,NULL; CELL CYCLE
CHECKPOINT PROTEIN RAD1,Rad1/Rec1/Rad17; Rad1,Rad1/Rec1/Rad17; DNA
c,CUFF.19397.1
         (301 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g22790.1                                                       539   e-153
Glyma20g22790.4                                                       524   e-149
Glyma20g22790.3                                                       280   1e-75
Glyma20g22790.2                                                       201   8e-52
Glyma10g28650.1                                                       199   3e-51

>Glyma20g22790.1 
          Length = 299

 Score =  539 bits (1389), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 260/298 (87%), Positives = 276/298 (92%), Gaps = 4/298 (1%)

Query: 8   EEDEAPDVLCHLENVQGLVDALTAVRWKRHQDAVLELSEHGIVLIVEESGCLQAKVYLKR 67
           EE+EAPDV+C LENVQGLVDALTAVRWKR QDAVLELSEHGIVLIVEESGCLQAKVYLKR
Sbjct: 2   EEEEAPDVICELENVQGLVDALTAVRWKRQQDAVLELSEHGIVLIVEESGCLQAKVYLKR 61

Query: 68  ELFIRYDYNAQA-RPRFGVSLGLFVDCLNAFSV---HGHSSVIQIQYPGPDMQVLLKSVD 123
           ELFIRYDYNA+  RPRFGVSLG FVDCLNAFSV      SS++QIQYPGPDMQ+LLKSVD
Sbjct: 62  ELFIRYDYNARGGRPRFGVSLGHFVDCLNAFSVPAGQSISSLVQIQYPGPDMQLLLKSVD 121

Query: 124 SPDASICAEIRTRIPDTVAWDYNFEPAGTNPLTFTVKSAALKEAIEDLEWPGSSIQIILE 183
           S DASICAEIRTRIPDT+AWDYNFEPAG NPLTFTVKSAALKEAIEDLEWPGSSI+I LE
Sbjct: 122 SLDASICAEIRTRIPDTIAWDYNFEPAGANPLTFTVKSAALKEAIEDLEWPGSSIKITLE 181

Query: 184 PDPPSVTMRAEGHGDLQIDFMYYVNSDLLAAFQCDNHTSFKYKYKFLRATTSNIPNSVIK 243
           PDPPSV++RAEGHGDLQIDFMYYVNS+LL AFQCD+  SFKYKYKFLRATTSN+P+SVIK
Sbjct: 182 PDPPSVSLRAEGHGDLQIDFMYYVNSELLVAFQCDHQASFKYKYKFLRATTSNMPSSVIK 241

Query: 244 ENRGSKLSIGRGGMLKVQHLVSIAKPSASHTHVDSAGYQQPGRIAHIEFFLKPEESED 301
           ENRGSKLSIGRGGMLKVQHLVSIAKPS SH + DS GYQQP RIAHIEFF+KPEESED
Sbjct: 242 ENRGSKLSIGRGGMLKVQHLVSIAKPSVSHPYADSVGYQQPSRIAHIEFFVKPEESED 299


>Glyma20g22790.4 
          Length = 294

 Score =  524 bits (1349), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 255/298 (85%), Positives = 271/298 (90%), Gaps = 9/298 (3%)

Query: 8   EEDEAPDVLCHLENVQGLVDALTAVRWKRHQDAVLELSEHGIVLIVEESGCLQAKVYLKR 67
           EE+EAPDV+C LENVQGLVDALTAVRWKR Q     LSEHGIVLIVEESGCLQAKVYLKR
Sbjct: 2   EEEEAPDVICELENVQGLVDALTAVRWKRQQ-----LSEHGIVLIVEESGCLQAKVYLKR 56

Query: 68  ELFIRYDYNAQA-RPRFGVSLGLFVDCLNAFSV---HGHSSVIQIQYPGPDMQVLLKSVD 123
           ELFIRYDYNA+  RPRFGVSLG FVDCLNAFSV      SS++QIQYPGPDMQ+LLKSVD
Sbjct: 57  ELFIRYDYNARGGRPRFGVSLGHFVDCLNAFSVPAGQSISSLVQIQYPGPDMQLLLKSVD 116

Query: 124 SPDASICAEIRTRIPDTVAWDYNFEPAGTNPLTFTVKSAALKEAIEDLEWPGSSIQIILE 183
           S DASICAEIRTRIPDT+AWDYNFEPAG NPLTFTVKSAALKEAIEDLEWPGSSI+I LE
Sbjct: 117 SLDASICAEIRTRIPDTIAWDYNFEPAGANPLTFTVKSAALKEAIEDLEWPGSSIKITLE 176

Query: 184 PDPPSVTMRAEGHGDLQIDFMYYVNSDLLAAFQCDNHTSFKYKYKFLRATTSNIPNSVIK 243
           PDPPSV++RAEGHGDLQIDFMYYVNS+LL AFQCD+  SFKYKYKFLRATTSN+P+SVIK
Sbjct: 177 PDPPSVSLRAEGHGDLQIDFMYYVNSELLVAFQCDHQASFKYKYKFLRATTSNMPSSVIK 236

Query: 244 ENRGSKLSIGRGGMLKVQHLVSIAKPSASHTHVDSAGYQQPGRIAHIEFFLKPEESED 301
           ENRGSKLSIGRGGMLKVQHLVSIAKPS SH + DS GYQQP RIAHIEFF+KPEESED
Sbjct: 237 ENRGSKLSIGRGGMLKVQHLVSIAKPSVSHPYADSVGYQQPSRIAHIEFFVKPEESED 294


>Glyma20g22790.3 
          Length = 159

 Score =  280 bits (717), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 137/157 (87%), Positives = 144/157 (91%), Gaps = 4/157 (2%)

Query: 8   EEDEAPDVLCHLENVQGLVDALTAVRWKRHQDAVLELSEHGIVLIVEESGCLQAKVYLKR 67
           EE+EAPDV+C LENVQGLVDALTAVRWKR QDAVLELSEHGIVLIVEESGCLQAKVYLKR
Sbjct: 2   EEEEAPDVICELENVQGLVDALTAVRWKRQQDAVLELSEHGIVLIVEESGCLQAKVYLKR 61

Query: 68  ELFIRYDYNAQ-ARPRFGVSLGLFVDCLNAFSV---HGHSSVIQIQYPGPDMQVLLKSVD 123
           ELFIRYDYNA+  RPRFGVSLG FVDCLNAFSV      SS++QIQYPGPDMQ+LLKSVD
Sbjct: 62  ELFIRYDYNARGGRPRFGVSLGHFVDCLNAFSVPAGQSISSLVQIQYPGPDMQLLLKSVD 121

Query: 124 SPDASICAEIRTRIPDTVAWDYNFEPAGTNPLTFTVK 160
           S DASICAEIRTRIPDT+AWDYNFEPAG NPLTFTVK
Sbjct: 122 SLDASICAEIRTRIPDTIAWDYNFEPAGANPLTFTVK 158


>Glyma20g22790.2 
          Length = 121

 Score =  201 bits (511), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 101/119 (84%), Positives = 107/119 (89%), Gaps = 4/119 (3%)

Query: 8   EEDEAPDVLCHLENVQGLVDALTAVRWKRHQDAVLELSEHGIVLIVEESGCLQAKVYLKR 67
           EE+EAPDV+C LENVQGLVDALTAVRWKR QDAVLELSEHGIVLIVEESGCLQAKVYLKR
Sbjct: 2   EEEEAPDVICELENVQGLVDALTAVRWKRQQDAVLELSEHGIVLIVEESGCLQAKVYLKR 61

Query: 68  ELFIRYDYNAQ-ARPRFGVSLGLFVDCLNAFSV---HGHSSVIQIQYPGPDMQVLLKSV 122
           ELFIRYDYNA+  RPRFGVSLG FVDCLNAFSV      SS++QIQYPGPDMQ+LLK V
Sbjct: 62  ELFIRYDYNARGGRPRFGVSLGHFVDCLNAFSVPAGQSISSLVQIQYPGPDMQLLLKYV 120


>Glyma10g28650.1 
          Length = 151

 Score =  199 bits (506), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 110/185 (59%), Positives = 120/185 (64%), Gaps = 38/185 (20%)

Query: 117 VLLKSVDSPDASICAEIRTRIPDTVAWDYNFEPAGTNPLTFTVKSAALKEAIEDLEWPGS 176
           +L +SVDS DASICAEIRT+IPDT+AWDYNFEPAG NPLTFTVKSAALKEAIEDLEWPGS
Sbjct: 1   LLFRSVDSLDASICAEIRTKIPDTIAWDYNFEPAGANPLTFTVKSAALKEAIEDLEWPGS 60

Query: 177 SIQIILEPDPPSVTMRAEGHGDLQIDFMYYVNSDLLAAFQCDNHTSFKYKYKFLRATTSN 236
           SIQIILEP+ PS            IDFMYYVNS+LL AFQC N +S              
Sbjct: 61  SIQIILEPELPS------------IDFMYYVNSELLVAFQCTNISS-------------- 94

Query: 237 IPNSVIKENRGSKLSIGRGGMLKVQHLVSI---AKPSASHTHVDSAGYQQPGRIAHIEFF 293
                       +L I    +LK     SI         HTHVDS GYQQPGRIAHIEFF
Sbjct: 95  ---------SEQQLLICLAVLLKKIEEFSIWFQLPNHLCHTHVDSVGYQQPGRIAHIEFF 145

Query: 294 LKPEE 298
           +KPEE
Sbjct: 146 VKPEE 150