Miyakogusa Predicted Gene

Lj0g3v0289679.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0289679.4 Non Chatacterized Hit- tr|C5Y4B4|C5Y4B4_SORBI
Putative uncharacterized protein Sb05g021440
OS=Sorghu,41.58,0.00000000000001,Transpos_assoc,NULL,CUFF.19353.4
         (90 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g23240.1                                                        60   6e-10
Glyma12g25030.1                                                        57   3e-09
Glyma13g10400.1                                                        55   1e-08
Glyma15g21480.1                                                        55   2e-08
Glyma05g23600.1                                                        54   3e-08
Glyma06g41670.1                                                        54   3e-08
Glyma11g33080.1                                                        54   4e-08
Glyma04g13890.1                                                        54   5e-08
Glyma18g37400.1                                                        53   7e-08
Glyma15g34200.1                                                        50   4e-07
Glyma15g38170.1                                                        50   4e-07
Glyma10g27470.1                                                        50   5e-07
Glyma10g25650.1                                                        49   1e-06

>Glyma01g23240.1 
          Length = 1378

 Score = 59.7 bits (143), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 2/90 (2%)

Query: 3  DKEWTKLPRFCPEYIMGVRRFLDFVYTKGRPQGDEILCPCAKCRNHCWTKRNVILDHLVA 62
          D+ W    R   EY  GV  FL F  +  +P   +  CPC KC N      + I  HL+ 
Sbjct: 2  DRSWMNASRITEEYENGVEEFLQFAQSNAQPMWGKYFCPCVKCGNGRRQTVDDIRTHLIC 61

Query: 63 NGFLKGYDVWVHHGEQIERPM--EVDDIIA 90
           G +  Y  W+ HGE ++     + +D IA
Sbjct: 62 EGIIHSYTKWIWHGESLDTTYMSQAEDAIA 91


>Glyma12g25030.1 
          Length = 1739

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 11 RFCPEYIMGVRRFLDFVYTKGRPQGD-EILCPCAKCRNHCWTKRNVILDHLVANGFLKGY 69
          R  PEY  GV +FL F   +GRP  + +  CPC  C N      + I DHL+ +G  K Y
Sbjct: 5  RMSPEYEDGVEQFLQFASERGRPNEEGKYYCPCINCLNGRRQLLDDIRDHLLCDGIKKNY 64

Query: 70 DVWVHHGE 77
            W+ HGE
Sbjct: 65 TTWIWHGE 72


>Glyma13g10400.1 
          Length = 2049

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 11 RFCPEYIMGVRRFLDFVYTKGRPQGD-EILCPCAKCRNHCWTKRNVILDHLVANGFLKGY 69
          R  PEY  G+ +FL F   +GRP  + +  CPC  C N      + I DHL+ +G  K Y
Sbjct: 5  RMSPEYEDGIEQFLQFASERGRPNEEGKYYCPCINCLNGRRKLLDDIRDHLLCDGIKKNY 64

Query: 70 DVWVHHGE 77
            W+ HGE
Sbjct: 65 TTWIWHGE 72


>Glyma15g21480.1 
          Length = 1869

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 11 RFCPEYIMGVRRFLDFVYTKGRPQGD-EILCPCAKCRNHCWTKRNVILDHLVANGFLKGY 69
          R  PEY  GV +FL F   +G+P  D +  CPC  C N      + I +HL+ +G  + Y
Sbjct: 5  RISPEYEEGVEQFLQFASERGQPDEDGKYYCPCINCLNGRRQILDDIREHLLCDGIKRNY 64

Query: 70 DVWVHHGEQIE 80
            W+ HGE  +
Sbjct: 65 TTWIWHGEMTD 75


>Glyma05g23600.1 
          Length = 1707

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 11 RFCPEYIMGVRRFLDFVYTKGRPQGD-EILCPCAKCRNHCWTKRNVILDHLVANGFLKGY 69
          R  PEY  GV +FL F   +G+P  D +  CPC  C N      + I +HL+ +G  + Y
Sbjct: 5  RISPEYEEGVEQFLQFASERGQPDEDGKYYCPCINCLNGRRQILDDIREHLLCDGIKRNY 64

Query: 70 DVWVHHGEQIE 80
            W+ HGE  +
Sbjct: 65 TTWIWHGEMTD 75


>Glyma06g41670.1 
          Length = 618

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/77 (33%), Positives = 33/77 (42%)

Query: 3  DKEWTKLPRFCPEYIMGVRRFLDFVYTKGRPQGDEILCPCAKCRNHCWTKRNVILDHLVA 62
          D+ W   PR    Y  GV  FL F            +CPC KC N      + I  HL+ 
Sbjct: 2  DRTWITAPRISKAYQHGVEEFLSFAQINSATIDANFVCPCVKCVNSRCHSLDDIRLHLIC 61

Query: 63 NGFLKGYDVWVHHGEQI 79
          +GF   Y  W+ HGE +
Sbjct: 62 DGFSPTYTKWIWHGELV 78


>Glyma11g33080.1 
          Length = 1508

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 38/85 (44%)

Query: 3  DKEWTKLPRFCPEYIMGVRRFLDFVYTKGRPQGDEILCPCAKCRNHCWTKRNVILDHLVA 62
          ++ W + PR   EY  GV  FL F        G +   PC  C N       VI  HL+ 
Sbjct: 2  NRSWIQAPRISDEYEKGVEDFLKFAKQHAPAVGGKYFFPCVNCVNGMRQALFVIRLHLIC 61

Query: 63 NGFLKGYDVWVHHGEQIERPMEVDD 87
          + F++ Y  W+ HGE  E    +D+
Sbjct: 62 DDFIRSYTNWIWHGELPEVSTPIDN 86


>Glyma04g13890.1 
          Length = 1235

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 3  DKEWTKLPRFCPEYIMGVRRFLDFVYTKGRP-QGDEILCPCAKCRNHCWTKRNVILDHLV 61
          D+ W    R    Y  GV +FL     + RP +  +  CPC  C N    K N I DHL+
Sbjct: 2  DQSWMNESRLSLVYEEGVEQFLQLASERSRPDENGKFFCPCINCLNGRRQKVNDIRDHLL 61

Query: 62 ANGFLKGYDVWVHHGE 77
           +   + Y  W+ HGE
Sbjct: 62 CDEIKRNYTTWIWHGE 77


>Glyma18g37400.1 
          Length = 965

 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 12 FCPEYIMGVRRFLDFVYTKGRPQGD-EILCPCAKCRNHCWTKRNVILDHLVANGFLKGYD 70
            PEY  GV +FL F   +GRP  + +  CPC  C N      + I DHL+ +G  K Y 
Sbjct: 1  MSPEYEDGVAQFLQFALERGRPNEEGKYYCPCINCLNGRRQLLDDIRDHLLCDGMKKNYT 60

Query: 71 VWVHHGE 77
           W+ HGE
Sbjct: 61 TWIWHGE 67


>Glyma15g34200.1 
          Length = 1627

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 15 EYIMGVRRFLDFVYTKGRPQGD-EILCPCAKCRNHCWTKRNVILDHLVANGFLKGYDVWV 73
          EY  GV +FL F   +GRP  + +  CPC  C N      + I DHL+ +G  K Y  W+
Sbjct: 9  EYEDGVEQFLQFASERGRPNEEGKYYCPCINCLNGRRQLLDDIRDHLLYDGIKKNYTAWI 68

Query: 74 HHGE 77
           HGE
Sbjct: 69 WHGE 72


>Glyma15g38170.1 
          Length = 886

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 11 RFCPEYIMGVRRFLDFVYTKGRPQGD-EILCPCAKCRNHCWTKRNVILDHLVANGFLKGY 69
          R   EY  GV +FL F   +G+P  D +  CPC  C N      + I +HL+ +G  + Y
Sbjct: 5  RISLEYEEGVEQFLQFASQRGQPDEDGKYYCPCINCLNGRRQILDDIREHLLCDGIKRNY 64

Query: 70 DVWVHHGEQIE 80
            W+ HGE  +
Sbjct: 65 TTWIWHGEMTD 75


>Glyma10g27470.1 
          Length = 1574

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 11 RFCPEYIMGVRRFLDFVYTKGRPQGD-EILCPCAKCRNHCWTKRNVILDHLVANGFLKGY 69
          R  P+Y  GV +FL F   +GRP  + +  CPC    N      + I DHL+ +G  K Y
Sbjct: 5  RMSPDYEDGVEQFLQFSSERGRPNEEGKYYCPCINYLNGRRQLLDDIRDHLLCDGIKKNY 64

Query: 70 DVWVHHGE 77
            W+ HGE
Sbjct: 65 TTWIWHGE 72


>Glyma10g25650.1 
          Length = 288

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 23  FLDFVYTKGRPQGD-EILCPCAKCRNHCWTKRNVILDHLVANGFLKGYDVWVHHGE 77
           FL F   +GRP  + +  CPC  C N      N I DHL+ +G  K Y  W+ HGE
Sbjct: 193 FLQFASERGRPNEEGKYYCPCINCLNGRRQLLNDIRDHLLCDGIKKNYTTWIWHGE 248