Miyakogusa Predicted Gene

Lj0g3v0288809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0288809.1 tr|A9TF63|A9TF63_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_169729,44.76,7e-18,COX16,Cytochrome c oxidase assembly
protein COX16; Q4P1Z3_USTMA_Q4P1Z3;,Cytochrome c oxidase
assembl,NODE_57619_length_747_cov_41.847389.path2.1
         (116 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g32090.1                                                       185   1e-47
Glyma10g35430.1                                                       184   1e-47

>Glyma20g32090.1 
          Length = 111

 Score =  185 bits (469), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 86/103 (83%), Positives = 96/103 (93%)

Query: 14  SFKRWGRKSPFVRYGLPMISLTVLGSLGLAHLLQGSKDIAKVKDDQEWEIIEARKALSRT 73
           +FKRWGR++PFVRYGLPMISLTVLGS+GL+ LLQGSKDIAKVKDD+EWEIIE RKALSRT
Sbjct: 9   AFKRWGRRNPFVRYGLPMISLTVLGSIGLSQLLQGSKDIAKVKDDREWEIIETRKALSRT 68

Query: 74  GPVDAYQPKKISLEDELKVLQQKVDINDYEYKKIPKPNESHRN 116
           GPV+AY PKKISLEDEL  LQQKVDIN+YEYKKIPKP E +R+
Sbjct: 69  GPVNAYNPKKISLEDELMALQQKVDINNYEYKKIPKPKEGNRD 111


>Glyma10g35430.1 
          Length = 121

 Score =  184 bits (468), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 89/118 (75%), Positives = 101/118 (85%), Gaps = 7/118 (5%)

Query: 4   TVHQSQNPAT-------SFKRWGRKSPFVRYGLPMISLTVLGSLGLAHLLQGSKDIAKVK 56
           T+ QS+  A        +FKRWGR++PF+RYGLPMISLTVLGS+GLA LLQGSKDIAKVK
Sbjct: 2   TIVQSEGAAKGTTTTEKAFKRWGRRTPFLRYGLPMISLTVLGSIGLAQLLQGSKDIAKVK 61

Query: 57  DDQEWEIIEARKALSRTGPVDAYQPKKISLEDELKVLQQKVDINDYEYKKIPKPNESH 114
           DDQEWEIIE +KALS+TGPV+AY PKKISLEDELK LQQKVDIN YEYKKIPKPN+ +
Sbjct: 62  DDQEWEIIETKKALSKTGPVNAYNPKKISLEDELKALQQKVDINSYEYKKIPKPNKGN 119