Miyakogusa Predicted Gene

Lj0g3v0288779.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0288779.1 tr|G7L8K6|G7L8K6_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_8g046310 PE=4 SV=1,45.19,2e-19,F_box_assoc_1: F-box
protein interaction domain,F-box associated interaction domain;
FBA_1,F-box ass,CUFF.19313.1
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g35240.1                                                       101   2e-22

>Glyma03g35240.1 
          Length = 231

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 83/133 (62%), Gaps = 23/133 (17%)

Query: 1   MNGVCHWFGYS--QSDSCALEDTHLVSFNFSNEIFYTTPLPLDDRRVQNDLAVLNESIAV 58
           ++G+CHW G+     + C      LVSF+ SN++         DR     L VLN SIA+
Sbjct: 119 VDGMCHWRGHEGIPQEEC------LVSFDLSNQVL--------DRY----LVVLNGSIAL 160

Query: 59  ISNHDETATLHISILGEIGMKESWTKLFTVGLGPLHGFEFIIGVGKMGDIFFRNENGELV 118
           IS + ET   HISILGE+G+KESWTKLF V  GPL      IGVGK GDIFFR ++ ELV
Sbjct: 161 ISYYVETTIFHISILGEVGVKESWTKLFIV--GPLPCVYCPIGVGKNGDIFFRRKDYELV 218

Query: 119 ALFDLSTQMLKEI 131
             F+LST M++E+
Sbjct: 219 -WFNLSTNMIEEL 230