Miyakogusa Predicted Gene

Lj0g3v0288769.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0288769.1 Non Chatacterized Hit- tr|I1PSZ4|I1PSZ4_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,64.77,8e-19,
,CUFF.19366.1
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g31090.1                                                       202   9e-53
Glyma10g36480.1                                                       167   3e-42

>Glyma20g31090.1 
          Length = 180

 Score =  202 bits (515), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 105/156 (67%), Positives = 117/156 (75%), Gaps = 8/156 (5%)

Query: 1   MNRRANVSLFNSFFRIGHSVRQSPIPTSLIPFTSSTHIIPASNFHSISK-----FAIMHN 55
           MNRRA +SL N+FFR      QSPI     PFT  TH+   S FHS S      FAI HN
Sbjct: 28  MNRRAKLSLLNAFFRTRRPFHQSPIAA---PFTPPTHVASTSKFHSFSNTPHTHFAIRHN 84

Query: 56  LRSFCGGSSEVDQNKEVDTINLKFVEAREEIDMALESKETVYFNEEAECARAAVNEVVGM 115
            RSF GGS  +D  KEVDTINLKF EAREEI+MALESK+TVYF+EEAECARAAVNEV+ M
Sbjct: 85  PRSFSGGSGVLDHTKEVDTINLKFAEAREEIEMALESKDTVYFDEEAECARAAVNEVLSM 144

Query: 116 FERLLARLPEKDRAALQRSMGLKIEQLKAELQQLDE 151
           FE LLA+LPE++R  LQRSMGLKIEQLKAEL QL+E
Sbjct: 145 FEGLLAKLPERERGVLQRSMGLKIEQLKAELAQLNE 180


>Glyma10g36480.1 
          Length = 146

 Score =  167 bits (424), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 86/137 (62%), Positives = 99/137 (72%), Gaps = 8/137 (5%)

Query: 1   MNRRANVSLFNSFFRIGHSVRQSPIPTSLIPFTSSTHIIPASNFHSI-----SKFAIMHN 55
           MNRR  +SL N+FFR      QSPI   + PFT  TH+   S FHS      + FAI   
Sbjct: 1   MNRREKLSLLNAFFRTRRPFHQSPI---VAPFTPPTHVASTSKFHSFPTIPHTHFAIRQY 57

Query: 56  LRSFCGGSSEVDQNKEVDTINLKFVEAREEIDMALESKETVYFNEEAECARAAVNEVVGM 115
            RSF GGS  +D  KEVDTINLKF EAREEI+MALESK+TVYF+EEAECARAAVNEV+GM
Sbjct: 58  PRSFAGGSGALDHTKEVDTINLKFAEAREEIEMALESKDTVYFDEEAECARAAVNEVLGM 117

Query: 116 FERLLARLPEKDRAALQ 132
           FE LLA+LPE++R ALQ
Sbjct: 118 FEGLLAKLPERERGALQ 134