Miyakogusa Predicted Gene

Lj0g3v0287739.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0287739.3 tr|G7KPS9|G7KPS9_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_6g0,71.11,0.0000000008, ,CUFF.19230.3
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g39830.1                                                        65   2e-11

>Glyma14g39830.1 
          Length = 704

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/46 (73%), Positives = 37/46 (80%), Gaps = 1/46 (2%)

Query: 33 QQQVVDALCSGERKKASDLLLDFGYRSR-SLKADDFVGILNYCARS 77
          Q+QVV+AL SG+RKKASDLL DFG RSR SL AD FV I  YCARS
Sbjct: 2  QRQVVEALHSGDRKKASDLLSDFGSRSRHSLTADHFVHIFEYCARS 47