Miyakogusa Predicted Gene
- Lj0g3v0286969.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0286969.1 Non Chatacterized Hit- tr|B9RLN5|B9RLN5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,44.29,0.0000009,Presenilin, signal peptide peptidase,
family,Peptidase A22, presenilin signal peptide;
Presenilin,Pe,CUFF.19163.1
(438 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g29800.2 504 e-142
Glyma19g29800.1 504 e-142
Glyma03g00870.1 325 7e-89
Glyma05g00390.1 320 2e-87
Glyma17g08640.1 315 9e-86
Glyma05g04120.1 110 2e-24
Glyma11g17180.1 55 2e-07
Glyma16g34400.1 53 5e-07
>Glyma19g29800.2
Length = 417
Score = 504 bits (1297), Expect = e-142, Method: Compositional matrix adjust.
Identities = 287/442 (64%), Positives = 317/442 (71%), Gaps = 29/442 (6%)
Query: 1 MESSVLESIGVEIIGVMSPVSICMFXXXXXXXXXXX-XXXXXXFRTAANLVYAENPSDTT 59
MESSVLE +GVEIIGVMSPVSICMF TAANLVYAENPSDT
Sbjct: 1 MESSVLEWLGVEIIGVMSPVSICMFLVVLLVYSLSSPSTTATTIATAANLVYAENPSDTA 60
Query: 60 AQKLEGALLNAVVFVVLIAIVTFLLVLLYYYNCTAFLRHYIRFSAFFVLASMGGSIFLSL 119
AQKLEGA+LNAVVF+V IA+ TFLLVLLYYYNCTAFL HY RFS FFVLA+MGGSI LSL
Sbjct: 61 AQKLEGAVLNAVVFIVFIALATFLLVLLYYYNCTAFLLHYTRFSTFFVLAAMGGSILLSL 120
Query: 120 IQRYSIPLDSPTCFLLLFNFTVVGVLSIFA-AGVPILVRQSYMVCLGIIVAAWFTQLPEW 178
++R+S+PLD+ T FLLLFNF VVGVLS+FA G+PIL+RQ Y VCLGIIVAAWFT+LPEW
Sbjct: 121 LERFSVPLDAVTSFLLLFNFAVVGVLSVFAGGGLPILLRQCYTVCLGIIVAAWFTKLPEW 180
Query: 179 TTWTXXXXXXXXXXXXXXXPGGPLKLLVELASSRNEELPALVYEARPTVT--GGGSTLGN 236
TTWT PGGPLKLLVEL SSRNEELPALVYEARPTV + +G
Sbjct: 181 TTWTVLVALALYDLVAVLAPGGPLKLLVELESSRNEELPALVYEARPTVNTRNHAAAVGF 240
Query: 237 LVTGVSESESSSIELQAVSSVVRXXXXXXXXSDSGAVVVRVEDLQXXXXXXXXXXXXXXX 296
+V GVS+SE+S IELQ VS V ++ ++ +
Sbjct: 241 IVAGVSDSETSRIELQVVSRVNSNNNNNLSSNNDNGENGINDEWE--------------- 285
Query: 297 XXXXSPLVGNSAMRFDGRQGEIVGDEEMSPLVEMTDMENGREMGRRDDDEEISERGIKLG 356
SPLVG MRF GE+V DE MSPLVEM+ + E +I ERGIK G
Sbjct: 286 ---RSPLVGG--MRF----GEVVVDEGMSPLVEMSGVGE-NEEEGEGVRRKIGERGIKFG 335
Query: 357 LGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRQALPALPISIALGVLF 416
LGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLS+CR+ALPALPISIALGVLF
Sbjct: 336 LGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSMCRKALPALPISIALGVLF 395
Query: 417 YFLTRLLMEPFIVGTATNLMMF 438
YFLTRLLMEPFIVGTATNLMMF
Sbjct: 396 YFLTRLLMEPFIVGTATNLMMF 417
>Glyma19g29800.1
Length = 417
Score = 504 bits (1297), Expect = e-142, Method: Compositional matrix adjust.
Identities = 287/442 (64%), Positives = 317/442 (71%), Gaps = 29/442 (6%)
Query: 1 MESSVLESIGVEIIGVMSPVSICMFXXXXXXXXXXX-XXXXXXFRTAANLVYAENPSDTT 59
MESSVLE +GVEIIGVMSPVSICMF TAANLVYAENPSDT
Sbjct: 1 MESSVLEWLGVEIIGVMSPVSICMFLVVLLVYSLSSPSTTATTIATAANLVYAENPSDTA 60
Query: 60 AQKLEGALLNAVVFVVLIAIVTFLLVLLYYYNCTAFLRHYIRFSAFFVLASMGGSIFLSL 119
AQKLEGA+LNAVVF+V IA+ TFLLVLLYYYNCTAFL HY RFS FFVLA+MGGSI LSL
Sbjct: 61 AQKLEGAVLNAVVFIVFIALATFLLVLLYYYNCTAFLLHYTRFSTFFVLAAMGGSILLSL 120
Query: 120 IQRYSIPLDSPTCFLLLFNFTVVGVLSIFA-AGVPILVRQSYMVCLGIIVAAWFTQLPEW 178
++R+S+PLD+ T FLLLFNF VVGVLS+FA G+PIL+RQ Y VCLGIIVAAWFT+LPEW
Sbjct: 121 LERFSVPLDAVTSFLLLFNFAVVGVLSVFAGGGLPILLRQCYTVCLGIIVAAWFTKLPEW 180
Query: 179 TTWTXXXXXXXXXXXXXXXPGGPLKLLVELASSRNEELPALVYEARPTVT--GGGSTLGN 236
TTWT PGGPLKLLVEL SSRNEELPALVYEARPTV + +G
Sbjct: 181 TTWTVLVALALYDLVAVLAPGGPLKLLVELESSRNEELPALVYEARPTVNTRNHAAAVGF 240
Query: 237 LVTGVSESESSSIELQAVSSVVRXXXXXXXXSDSGAVVVRVEDLQXXXXXXXXXXXXXXX 296
+V GVS+SE+S IELQ VS V ++ ++ +
Sbjct: 241 IVAGVSDSETSRIELQVVSRVNSNNNNNLSSNNDNGENGINDEWE--------------- 285
Query: 297 XXXXSPLVGNSAMRFDGRQGEIVGDEEMSPLVEMTDMENGREMGRRDDDEEISERGIKLG 356
SPLVG MRF GE+V DE MSPLVEM+ + E +I ERGIK G
Sbjct: 286 ---RSPLVGG--MRF----GEVVVDEGMSPLVEMSGVGE-NEEEGEGVRRKIGERGIKFG 335
Query: 357 LGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRQALPALPISIALGVLF 416
LGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLS+CR+ALPALPISIALGVLF
Sbjct: 336 LGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSMCRKALPALPISIALGVLF 395
Query: 417 YFLTRLLMEPFIVGTATNLMMF 438
YFLTRLLMEPFIVGTATNLMMF
Sbjct: 396 YFLTRLLMEPFIVGTATNLMMF 417
>Glyma03g00870.1
Length = 364
Score = 325 bits (833), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 169/229 (73%), Positives = 185/229 (80%), Gaps = 1/229 (0%)
Query: 1 MESSVLESIGVEIIGVMSPVSICMFXXXXXXXXXXXXXXXXXFRTAANLVYAENPSDTTA 60
MESSVLE +G+EIIGVMSPVSICMF TAANLVYAENPSDTTA
Sbjct: 1 MESSVLECLGMEIIGVMSPVSICMFLVVLLVYSLSSPSTTTTIATAANLVYAENPSDTTA 60
Query: 61 QKLEGALLNAVVFVVLIAIVTFLLVLLYYYNCTAFLRHYIRFSAFFVLASMGGSIFLSLI 120
QKLEGA+LNAVVFVVLIA+VTFLLVLLYYYNCTAFL HY RFSAFFVLA+MGGSI LSL+
Sbjct: 61 QKLEGAVLNAVVFVVLIALVTFLLVLLYYYNCTAFLLHYTRFSAFFVLAAMGGSILLSLL 120
Query: 121 QRYSIPLDSPTCFLLLFNFTVVGVLSIFAA-GVPILVRQSYMVCLGIIVAAWFTQLPEWT 179
QR+S+PLD+ T FLLLFNF+VVGVLS+FA+ G+PIL+RQ Y VCLGIIVAAWFT+LPEWT
Sbjct: 121 QRFSLPLDAVTSFLLLFNFSVVGVLSVFASGGLPILLRQCYTVCLGIIVAAWFTKLPEWT 180
Query: 180 TWTXXXXXXXXXXXXXXXPGGPLKLLVELASSRNEELPALVYEARPTVT 228
TWT PGGPLKLLVELASSR+EELPALVYEARPTV
Sbjct: 181 TWTLLVALALYDLVAVLAPGGPLKLLVELASSRDEELPALVYEARPTVN 229
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/116 (83%), Positives = 101/116 (87%), Gaps = 7/116 (6%)
Query: 323 EMSPLVEMTDMENGREMGRRDDDEEISERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACY 382
E SPLV + E G RR EI ERGIKLGLGDFVFYSVLVGRA+MYDLMTVYACY
Sbjct: 256 ERSPLVGRNEEEEGV---RR----EIGERGIKLGLGDFVFYSVLVGRASMYDLMTVYACY 308
Query: 383 LAIISGLGCTLILLSVCRQALPALPISIALGVLFYFLTRLLMEPFIVGTATNLMMF 438
LAIISGLGCTLILLSVCR+ALPALPISIALGVLFYFLTRLLMEPFIVGTATNL+MF
Sbjct: 309 LAIISGLGCTLILLSVCRKALPALPISIALGVLFYFLTRLLMEPFIVGTATNLIMF 364
>Glyma05g00390.1
Length = 483
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 199/452 (44%), Positives = 261/452 (57%), Gaps = 22/452 (4%)
Query: 3 SSVLESIGVEIIGVMSPVSICMFXXXXXXXXXXXXXXXXXFRTAANLV---YAENPSDTT 59
SSVL+S+G EI+ +++PVSICMF F + ++V Y E SD+T
Sbjct: 38 SSVLDSLGEEIVRIIAPVSICMFLVVILVSTLNTDSSL--FDASMSMVTIAYNETTSDST 95
Query: 60 AQKLEGALLNAVVFVVLIAIVTFLLVLLYYYNCTAFLRHYIRFSAFFVLASMGGSIFLSL 119
K GALLN++ FV+L+ TF+LVLL+Y+ CT FL+ Y+ FS F VL +GG + + L
Sbjct: 96 WDKFLGALLNSLAFVILVTFATFVLVLLFYFRCTRFLKLYMAFSTFIVLLFLGGEVSIFL 155
Query: 120 IQRYSIPLDSPTCFLLLFNFTVVGVLSIFAAGVPILVRQSYMVCLGIIVAAWFTQLPEWT 179
IQ++S P+D T FL+L NF VVGVL++F + + ILV Q Y+V +GI+VA FT LPEWT
Sbjct: 156 IQKFSTPIDCITFFLVLCNFAVVGVLTVFISKMAILVTQGYLVVVGILVAYSFTMLPEWT 215
Query: 180 TWTXXXXXXXXXXXXXXXPGGPLKLLVELASSRNEELPALVYEARPTVTGGGSTLGNLVT 239
TW P GPL+LLVELA SR+EE+PALVYEARP V G +
Sbjct: 216 TWALLVAMALYDLAAVLLPIGPLRLLVELAISRDEEIPALVYEARP-VNHGSLDPMEVTQ 274
Query: 240 GVSESESSSIELQAVSSVVRXXXXXXXXSDSGAVVVRVED-LQXXXXXXXXXXXXXXXXX 298
E L A S + +DSGA D
Sbjct: 275 RRLWRERRVQNLNANSVLAHGPDNVESHADSGASAGYNRDGADLVRENASLNSILNADSS 334
Query: 299 XXSPLVGNSAMRFDGR-QGEIVGDEEMSPLVEMTDMENGREMGRRDDDEEI--------- 348
S GN +GR + + G + +PL+ D ++GR +D I
Sbjct: 335 GGSNGYGNLVSVEEGRVRVQETGSDLSAPLI---DRGMNVQLGRGEDAASIENLMLEGIG 391
Query: 349 --SERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRQALPAL 406
S IKLGLGDF+FYSVLVGRAAMYD MTVYACYLAII+GLG TL+LL+ ++ALPAL
Sbjct: 392 LGSSGSIKLGLGDFIFYSVLVGRAAMYDYMTVYACYLAIIAGLGITLMLLAFYQKALPAL 451
Query: 407 PISIALGVLFYFLTRLLMEPFIVGTATNLMMF 438
P+S+A+GVLFYFLTRLL+E F+V + NL++F
Sbjct: 452 PVSVAMGVLFYFLTRLLLEVFVVQCSLNLLLF 483
>Glyma17g08640.1
Length = 473
Score = 315 bits (806), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 202/458 (44%), Positives = 262/458 (57%), Gaps = 33/458 (7%)
Query: 3 SSVLESIGVEIIGVMSPVSICMFXXXXXXXXXXXXXXXXXFRTA-ANLVYAENPSDTTAQ 61
SSVL+S+G EI+ +++PVSICMF + + Y E SD+T
Sbjct: 27 SSVLDSLGEEIVRIVAPVSICMFLVVILVSILNTDSSLFVASMSMVTIAYNETTSDSTWD 86
Query: 62 KLEGALLNAVVFVVLIAIVTFLLVLLYYYNCTAFLRHYIRFSAFFVLASMGGSIFLSLIQ 121
K GALLN++ FVVL+ TF+LVLL+Y+ CT FL+ Y+ FS F VL +GG + + LIQ
Sbjct: 87 KFLGALLNSLAFVVLVTFATFVLVLLFYFRCTRFLKLYMAFSTFIVLLFLGGEVSIFLIQ 146
Query: 122 RYSIPLDSPTCFLLLFNFTVVGVLSIFAAGVPILVRQSYMVCLGIIVAAWFTQLPEWTTW 181
++S P+D T FL+L NF VVGVL++F + + ILV Q Y+V +GI+VA FT LPEWTTW
Sbjct: 147 KFSTPIDCITFFLVLCNFAVVGVLTVFISKMAILVTQGYLVVVGILVAYSFTMLPEWTTW 206
Query: 182 TXXXXXXXXXXXXXXXPGGPLKLLVELASSRNEELPALVYEARPTVTGGGSTLGNLVTGV 241
P GPL++LVELA SR+EE+PALVYEARP V G +
Sbjct: 207 ALLVAMALYDLAAVLLPIGPLRILVELAISRDEEIPALVYEARP-VKHGSLDPREVAQRR 265
Query: 242 SESESSSIELQAVSSVV-RXXXXXXXXSDSGAVVVRVEDLQXXXXXXXXXXXXXXXXXXX 300
E L A +SV+ SDSGA D
Sbjct: 266 LWRERRVQSLNANNSVLAHGPNNAESHSDSGANAGDNWD---------GANLVRENASLN 316
Query: 301 SPLVGNSAMRFDGRQGEIVGDEEMSPLVEMTD-------MENGR--EMGRRDDDEEI--- 348
S L +S+ G G +V EE V+ TD M+ G ++GR +D I
Sbjct: 317 SNLNADSSGGSYG-YGNLVSVEEGWLRVQETDSDLSAPLMDRGMNVQLGRGEDTVSIDNL 375
Query: 349 --------SERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCR 400
S IKLGLGDF+FYSVLVGRAAMYD MTVYACYLAII+GLG TL+LL+ +
Sbjct: 376 MLEGIGLASSGSIKLGLGDFIFYSVLVGRAAMYDYMTVYACYLAIIAGLGITLMLLAFYQ 435
Query: 401 QALPALPISIALGVLFYFLTRLLMEPFIVGTATNLMMF 438
+ALPALP+S+ +GVLFYFLTRLL+E F+V + NL++F
Sbjct: 436 KALPALPVSVGMGVLFYFLTRLLLEVFVVQCSLNLLLF 473
>Glyma05g04120.1
Length = 97
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 64/96 (66%)
Query: 12 EIIGVMSPVSICMFXXXXXXXXXXXXXXXXXFRTAANLVYAENPSDTTAQKLEGALLNAV 71
EII +MSPVSICMF T ANLVY ENP+DT +QKLE +LN V
Sbjct: 2 EIISMMSPVSICMFLVVLLVYSLSSLFIATTITTTANLVYVENPTDTASQKLESMVLNIV 61
Query: 72 VFVVLIAIVTFLLVLLYYYNCTAFLRHYIRFSAFFV 107
V +VLI ++TFL VLLYYYNCTAFL HY FSAFFV
Sbjct: 62 VLIVLITLLTFLPVLLYYYNCTAFLLHYTHFSAFFV 97
>Glyma11g17180.1
Length = 72
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 393 LILLSVCRQALPALPISIALGVLFYFLTRLLMEPFIVGTATNLMMF 438
L+LL ++AL ALP+S+ +GVLFYFL RLL+E F+V + NLM+F
Sbjct: 27 LMLLGFYQKALSALPVSVRMGVLFYFLIRLLLEVFVVQCSLNLMLF 72
>Glyma16g34400.1
Length = 81
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 19/79 (24%)
Query: 82 FLLVLLYYYNCTAFLRHYIRFSAFFVLASMGGSIFLSLIQRYSIPLDSPTCFLLLFNFTV 141
F LVL+ YYN AFL + FSAFFVLA++GGSI +LFNFT+
Sbjct: 10 FFLVLVNYYNFIAFLCRNMWFSAFFVLATIGGSI-------------------VLFNFTI 50
Query: 142 VGVLSIFAAGVPILVRQSY 160
VL +F +PIL+ +S+
Sbjct: 51 FEVLFVFIGNLPILLHRSW 69