Miyakogusa Predicted Gene

Lj0g3v0286589.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0286589.1 Non Chatacterized Hit- tr|H9KQU5|H9KQU5_APIME
Uncharacterized protein OS=Apis mellifera GN=Rab3gap1
,25.14,3e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,Rab3
GTPase-activating protein catalytic subuni,CUFF.19117.1
         (540 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g29320.1                                                       862   0.0  
Glyma18g06600.1                                                       851   0.0  
Glyma02g46190.1                                                        59   1e-08
Glyma08g43140.1                                                        59   1e-08
Glyma14g02550.1                                                        57   6e-08

>Glyma11g29320.1 
          Length = 1011

 Score =  862 bits (2226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/530 (81%), Positives = 457/530 (86%), Gaps = 34/530 (6%)

Query: 41  LASSWERFISEIEAVCRLWMSDGPKNLLEKGAVHLEYSGNLYKVKSELKYAMKSYCMEYY 100
           LASSWERFIS+IEAV R+WMSDGPKNLLEKGAV LE +GNLYKVKSE+KYAMKSYCME+Y
Sbjct: 34  LASSWERFISKIEAVLRVWMSDGPKNLLEKGAVLLEDAGNLYKVKSEMKYAMKSYCMEFY 93

Query: 101 FETKPDGKPADWNFDLHDVQLCFGVKEFLVIAPQSASGVVLDPPEASKLLSAVAIALSNC 160
           F T PDGK ADWNFDLHD+QLCFGVKEFLVIAPQSASGV+LD PE+SKLLSA+AIALSNC
Sbjct: 94  FMTDPDGKLADWNFDLHDLQLCFGVKEFLVIAPQSASGVILDAPESSKLLSAIAIALSNC 153

Query: 161 SSLW------------------------PAFVPVHDPSRKAYIGIQSMGTVFTRRFEADR 196
           S  +                            PVHDPSRKAYIGIQSMGTVFTRRFEADR
Sbjct: 154 SRSYCVMGFKFHGLQGLNKEIVEISIYGQHLFPVHDPSRKAYIGIQSMGTVFTRRFEADR 213

Query: 197 IGSQVPIKLMHLEGLYELFVSKFAYSTLDLSVHDFKVRFAMKLTFRTLPYDDDYMKGFGE 256
           IGSQVP+KLMHLEGLYELFVSKFAYSTLDLSVH+FKVR AMKLTFRTLPYDDD MK    
Sbjct: 214 IGSQVPVKLMHLEGLYELFVSKFAYSTLDLSVHNFKVRCAMKLTFRTLPYDDDNMKD--A 271

Query: 257 KITKSGENLTGEMSNGKQWDDDCSWSEWYSAEDPVKGFELITIWSEKMVESSMEMAELEN 316
           KI+KSGENLTG M NG QWDDDCSWSEWYSAEDPVKGFELI IWSEKMVESSMEMAELEN
Sbjct: 272 KISKSGENLTGPMCNGTQWDDDCSWSEWYSAEDPVKGFELIAIWSEKMVESSMEMAELEN 331

Query: 317 ASPHEAEKWLISLR------PEGPKGNRIGFASQLHLLVDALEMSFEAQFIEDFVS-VEN 369
           ASPHEAEKWLISLR       EG  GNR+GFAS+L LLVDAL++SFEAQF+EDFVS VEN
Sbjct: 332 ASPHEAEKWLISLRFTPNFKLEGSSGNRVGFASELCLLVDALQVSFEAQFMEDFVSAVEN 391

Query: 370 PGSDNLKSSMVIPSPAVRDRVLKELFIEGVQLSKFADDRHKTSRAIKGAPLESLFAQFCL 429
           PGSDNLKS MVIP P VRDRVLKELFIEGVQ S FAD RHKTSRAIKGAPL SLFAQFCL
Sbjct: 392 PGSDNLKS-MVIPPPTVRDRVLKELFIEGVQFSDFADSRHKTSRAIKGAPLGSLFAQFCL 450

Query: 430 HSLWFGNCNIRAIAVLWIEFVREVRWCWEESQPLPRMPANGTIDLSTCLINQKLQMLAIC 489
           HSLWFGNCNIRAIAVLWIEFVREVRWCWEESQ L RMPANG+IDLSTCLINQKLQMLAIC
Sbjct: 451 HSLWFGNCNIRAIAVLWIEFVREVRWCWEESQLLSRMPANGSIDLSTCLINQKLQMLAIC 510

Query: 490 IEKKCQLNEDFQDCIGSLDHIDSMTEEESVIGNDSFNKQTLSEGFSGKVD 539
           IE+KCQLNED+QDCIGSLD ID M+EEESV+G+DSF+ QT SE F GKVD
Sbjct: 511 IERKCQLNEDYQDCIGSLDQIDFMSEEESVVGDDSFSLQTPSEDFFGKVD 560


>Glyma18g06600.1 
          Length = 903

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/523 (81%), Positives = 449/523 (85%), Gaps = 30/523 (5%)

Query: 41  LASSWERFISEIEAVCRLWMSDGPKNLLEKGAVHLEYSGNLYKVKSELKYAMKSYCMEYY 100
           LASSWERFISEIEAV R+WMSDGP NLLEKGAV LE +GNLYKVKSE+KYAMKSYCME+Y
Sbjct: 9   LASSWERFISEIEAVLRVWMSDGPNNLLEKGAVLLEDAGNLYKVKSEMKYAMKSYCMEFY 68

Query: 101 FETKPDGKPADWNFDLHDVQLCFGVKEFLVIAPQSASGVVLDPPEASKLLSAVAIALSNC 160
           F+T PDGK ADWNFDLHD+QLCFGVKEFLVIAPQSASGVVLD PE+SKLLSA+AIALSNC
Sbjct: 69  FKTDPDGKLADWNFDLHDLQLCFGVKEFLVIAPQSASGVVLDAPESSKLLSAIAIALSNC 128

Query: 161 SSLWPAFVPVHDPSRKAYIGIQSMGTVFTRRFEADRIGSQVPIKLMHLEGLYELFVSKFA 220
           SSLWPAFVPVHDPSRKAYIGIQSMGTVFTRRFEADRIGSQVP+KLMHLEGLYELFVSKFA
Sbjct: 129 SSLWPAFVPVHDPSRKAYIGIQSMGTVFTRRFEADRIGSQVPVKLMHLEGLYELFVSKFA 188

Query: 221 YSTLDLSVHDFKVRFAMKLTFRTLPYDDDYMKGFGEKITKSGENLTGEMSNGKQWDDDCS 280
           YSTLDLSVH+FKVR AMKLTFRTLPYDDD +K    KI+KSGENLTGEMS G QWDDDCS
Sbjct: 189 YSTLDLSVHNFKVRCAMKLTFRTLPYDDDNIK--DAKISKSGENLTGEMSIGTQWDDDCS 246

Query: 281 WSEWYSAEDPVKGFELITIWSEKMVESSMEMAELENASPHEAEKWLISLR---------- 330
           WSEWYSAEDPVKGFELI IWSEKMVESSMEMAELENASPHEAEKWL SLR          
Sbjct: 247 WSEWYSAEDPVKGFELIAIWSEKMVESSMEMAELENASPHEAEKWLTSLRFTPNFKLFIF 306

Query: 331 -------------PEGPKGNRIGFASQLHLLVDALEMSFEAQFIEDFVS-VENPGSDNLK 376
                         EG  GNR+GF S+L LLVDAL+MSFEAQFIEDFVS VENPG DNLK
Sbjct: 307 VAYVINEYLLLKVLEGSSGNRVGFTSELRLLVDALQMSFEAQFIEDFVSAVENPGPDNLK 366

Query: 377 SSMVIPSPAVRDRVLKELFIEGVQLSKFADDRHKTSRAIKGAPLESLFAQFCLHSLWFGN 436
            SMVIP P VRDRVLKELFIEG+Q S FA+  HK SRAIKGAPL SLFAQFCLHSLWFGN
Sbjct: 367 -SMVIPPPTVRDRVLKELFIEGIQFSDFANSGHKISRAIKGAPLGSLFAQFCLHSLWFGN 425

Query: 437 CNIRAIAVLWIEFVREVRWCWEESQPLPRMPANGTIDLSTCLINQKLQMLAICIEKKCQL 496
           CNIRAIAVLWIEFVREVRWCWEESQ LPRMPANG+IDLSTCLINQKLQMLAICIE+KCQL
Sbjct: 426 CNIRAIAVLWIEFVREVRWCWEESQLLPRMPANGSIDLSTCLINQKLQMLAICIERKCQL 485

Query: 497 NEDFQDCIGSLDHIDSMTEEESVIGNDSFNKQTLSEGFSGKVD 539
           +ED+QDCIGSLD IDSM+E   +  N    +     G +G VD
Sbjct: 486 SEDYQDCIGSLDQIDSMSE---LYFNRGIERDLTRRGSAGIVD 525


>Glyma02g46190.1 
          Length = 696

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 413 RAIKGAPLESLFAQFCLHSLWFGNCNIRAIAVLWIEFVREVRWCWEESQPLPRMPANGTI 472
           R I GAP ESL  +  L  +      +R +A+ W   V E+R  W E Q LP +P N   
Sbjct: 249 RDIHGAPPESLVVK--LAEILGNYKTLRKMALFWCRVVAELRKLWSEEQYLPGVPQNEIP 306

Query: 473 DLSTCLINQKLQMLAICIEKK 493
           DL +CL+ Q  Q++  CI +K
Sbjct: 307 DLKSCLLYQHFQVINCCISRK 327


>Glyma08g43140.1 
          Length = 627

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 17/163 (10%)

Query: 342 ASQLHLLVDALEMSFEAQFIEDFVSVENPGSDNLKSSMVIPSPAVRDRVLKELFIEGVQL 401
           +S L  L  A+E   +   ++DFV+    GS   +    +   +V+  VL+E   E    
Sbjct: 93  SSVLKQLAIAIESGRQTNSMKDFVASSR-GSSPAREKAGLSLSSVKALVLREK--EDKLT 149

Query: 402 SKFADDRH----------KTSRAIKGAPLESLFAQFCLHSLWFGNC-NIRAIAVLWIEFV 450
           S+F+ D            +    I GAPLESL  +    +   GN   +R +++ W   V
Sbjct: 150 SEFSSDEKVVYLINSLFDQEGEDIHGAPLESLVVKL---AEVIGNFKTLREMSLFWSRVV 206

Query: 451 REVRWCWEESQPLPRMPANGTIDLSTCLINQKLQMLAICIEKK 493
            E+R  W E + LP +P +   DL +CL+ Q+ Q++  CI +K
Sbjct: 207 DELRKHWSEEKHLPGIPPDDIPDLKSCLLYQQFQVINCCISRK 249


>Glyma14g02550.1 
          Length = 697

 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 413 RAIKGAPLESLFAQFCLHSLWFGNCNIRAIAVLWIEFVREVRWCWEESQPLPRMPANGTI 472
           R I GAP ESL  +  L  +      +R +A+ W   V E+R  W E Q LP +P +   
Sbjct: 250 RDIHGAPPESLVVK--LAEILGNYKTLRKMALFWCRVVAELRKLWFEEQYLPGVPQDEIP 307

Query: 473 DLSTCLINQKLQMLAICIEKK 493
           DL +CL+ Q+ Q++  CI +K
Sbjct: 308 DLKSCLLYQQFQVINCCISRK 328