Miyakogusa Predicted Gene

Lj0g3v0286519.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0286519.1 Non Chatacterized Hit- tr|G7JQJ9|G7JQJ9_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,56.32,2e-18,F-box domain,F-box domain, cyclin-like;
FBOX,F-box domain, cyclin-like; seg,NULL; no
description,NUL,gene.g22301.t1.1
         (454 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g33610.1                                                        89   7e-18
Glyma13g35940.1                                                        81   2e-15
Glyma08g17900.1                                                        75   1e-13
Glyma18g35360.1                                                        59   1e-08
Glyma12g07320.1                                                        55   2e-07
Glyma08g46320.1                                                        55   2e-07
Glyma08g46590.2                                                        53   7e-07
Glyma17g36600.1                                                        52   1e-06
Glyma10g34410.1                                                        52   2e-06
Glyma18g35370.1                                                        51   3e-06
Glyma02g14070.1                                                        50   3e-06
Glyma08g46590.1                                                        50   6e-06

>Glyma13g33610.1 
          Length = 209

 Score = 89.4 bits (220), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 112/248 (45%), Gaps = 52/248 (20%)

Query: 1   MISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRM---------IK 51
           MIS LPDEI T I+S L +DEAVR S+LSKTW  LW+  S ++ + T M         I 
Sbjct: 4   MISNLPDEIKTNILSKLCIDEAVRCSVLSKTWKGLWKGMSHMELNATNMPRTFPDFSAIA 63

Query: 52  RRNVHAVRKYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFLVERNKNLISLT 111
              + +V  Y  LV  +L  HL  ++ CR ++   SL  E +   V+ L+   +      
Sbjct: 64  PPMLKSVIGYNALVVPLLFNHLGVISSCRIQHFKKSLAFEHVENWVEILIMPEE------ 117

Query: 112 LECIKTRPYFPSVMLNFKSGIFSNLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIME 171
                   Y P     F+ G F  L SLEL NY +                         
Sbjct: 118 ------YTYIP----RFRHGAFECLASLELINYTL------------------------- 142

Query: 172 EQAVNDVLENCSSLERFILVESTGFKKLKIRNPSLNFLELRWLVVNEIDVFVENLHEVVI 231
             +    LE CS L+R  +       ++ I   +L  L+L+ L V+E+ +  ENL  +++
Sbjct: 143 -NSWIPFLE-CSQLKRLKMKSIYLDDRVIIMRSTLKVLQLQALCVDELQISCENLDVMML 200

Query: 232 DSILCPSK 239
           DSI+CP +
Sbjct: 201 DSIICPMQ 208


>Glyma13g35940.1 
          Length = 261

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 18/248 (7%)

Query: 1   MISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKR----RNVH 56
           +IS LPD +L  IIS L  +E VRT +LS  W  +W++   L  D ++M  +     ++ 
Sbjct: 21  LISTLPDSVLVSIISLLPCNEGVRTCVLSNRWKTMWKHVPHLSLDQSKMGDQEKDFEDLD 80

Query: 57  AVRKYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFLVERNKNLISLTLECIK 116
            + K   L+ +VL+ H+  L  C  R+L  S  + +    ++ L+++NK  +   L    
Sbjct: 81  EIAKAEVLIDSVLDSHVVSLESCTIRHLPESCASGKAVMWIEKLLKQNKESLPRVL---- 136

Query: 117 TRPYFPSVMLNFKSGIFSNLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIMEEQAVN 176
            R +  ++ L FK  IFS   +LEL NY + + + S+ + C            +++ A  
Sbjct: 137 -RYHGRTLDLPFK--IFSGFEALELKNYFL-KTSPSSNDSCQVLTTLAFRNMSVKKDAWE 192

Query: 177 DVLENCSSLERFILVESTG-----FKKLKIRNPSLNFLELRWLVVNEIDVFVENLHEVVI 231
            +L  C  LE   L   T       +++ I +P L FL +  + +N   ++ +  + V+ 
Sbjct: 193 GILSCCLCLENLTLENVTHDNCKLMREVTINSPRLKFLRICRMQMNGFKMYYKRTNPVIT 252

Query: 232 DSILCPSK 239
              LC S+
Sbjct: 253 PE-LCSSE 259


>Glyma08g17900.1 
          Length = 243

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 17/243 (6%)

Query: 1   MISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIK---RRNVHA 57
           +IS LPD ++  IIS L   E VRT + SK W   W + S L+ D  +M+K   + N+  
Sbjct: 2   LISALPDPLVGAIISLLPNTEGVRTCVFSKRWKKAWMHMSHLNIDQVQMMKPFIQANLCG 61

Query: 58  VRKYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFLVERNKNLISLTLECIKT 117
           V  +  L+ +VLN H   L  C  R+L  S  +      + + + +N        + +K 
Sbjct: 62  VH-HKRLIISVLNSHSHPLESCNIRHLPESCASGNQTDPIHWDILQN------APQGVK- 113

Query: 118 RPYFPSVMLNFKSGIFSNLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIMEEQAVND 177
              +  + ++    IFS+   LEL NY + +   S+ +             ++++     
Sbjct: 114 ---YHEMTIDLPFEIFSSFEELELKNYYL-KTKPSSGDFAQVLKKLTFKNMMVDKDDWEG 169

Query: 178 VLENCSSLERFILVESTGFKKLKIRNPSLNFLELRWLVVNEIDVFVENLHEVVIDSILC- 236
           ++  C  LE  + +++   + +KI NP L FL +  + V +IDV   NL  + ID+++C 
Sbjct: 170 IMSYCLCLEN-LTIDNCMMEIIKINNPRLKFLRICRMEVIKIDVSAINLEIIEIDTVVCK 228

Query: 237 PSK 239
           P K
Sbjct: 229 PQK 231


>Glyma18g35360.1 
          Length = 357

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 43/70 (61%)

Query: 2  ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAVRKY 61
          IS LP+E+L +I+S L   +AV T ILSK W PLWR+ S LDF+    +++R      + 
Sbjct: 8  ISSLPNELLCHILSFLPTKQAVATGILSKRWGPLWRSVSTLDFNDESYLQKRTFFYWYRS 67

Query: 62 GELVSTVLNR 71
           + V TV+ R
Sbjct: 68 VQSVYTVMLR 77


>Glyma12g07320.1 
          Length = 340

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 105/253 (41%), Gaps = 71/253 (28%)

Query: 1   MISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWR-NSSCLDFDGTRMIKRRNVHAVR 59
           +IS +PD+IL  I+S L++ EA RTS+L+  W   W   S  LDFD +     RN H  R
Sbjct: 12  IISTMPDDILGDILSRLTLKEAARTSVLATKWRYHWTFFSGLLDFDHS----LRNFHLRR 67

Query: 60  KYGELVSTVLNRHLCDLTMCR---FRYLSPSL----------NAEELAALVKFLVERNKN 106
           +           H+  LT C    + + S SL          +   +A  VK+  E++  
Sbjct: 68  E-----------HVGILTKCNVFVYEWESSSLQGLRICMDLGDPWRVAEWVKYAAEKHVQ 116

Query: 107 LISLTLECIKTRPY-----------FPSVMLNFKSGIFSNLCSLELNNYLMRRVNASAFE 155
            + L      + P+           FPS     KS     LC+L L++     V+ S   
Sbjct: 117 TLDLDFSYHFSVPFYEISLTIVHNVFPSRGYEMKS-----LCNLRLSS-----VDVSG-- 164

Query: 156 GCXXXXXXXXXXXIMEEQAVNDVLENCSSLERFILVESTGFKKLKIRNPSLNF--LELRW 213
                            + +  +L +C  LE   ++ES    +LK+R  +L    LEL  
Sbjct: 165 -----------------EVIEGLLASCPLLESICVIESKRLVRLKVRGEALRLKHLELVE 207

Query: 214 LVVNEIDVFVENL 226
             + ++D++  NL
Sbjct: 208 CRIMDLDIYAVNL 220


>Glyma08g46320.1 
          Length = 379

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 11/147 (7%)

Query: 2   ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAV--- 58
           IS LPDE+L +I+S LS  EA+ TS++SK W PLW +   LD D    I+    ++    
Sbjct: 7   ISALPDEVLGHILSFLSTQEAISTSLVSKRWQPLWLSIPILDLDDITFIQNGKSYSSFFN 66

Query: 59  RKYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFLVER--NKNLISLTLECIK 116
             +G L++  + +    L + R R+ S   +     +  K  V     + L  L +E   
Sbjct: 67  FAFGSLLARNVQQ---PLKLARLRFNSCGYDNNFPYSHFKIWVNAVIQRGLEHLQIEM-- 121

Query: 117 TRPY-FPSVMLNFKSGIFSNLCSLELN 142
            RP+  P+++LN K+ +   L    +N
Sbjct: 122 PRPFELPNIILNCKTLVVLKLYRFRVN 148


>Glyma08g46590.2 
          Length = 380

 Score = 53.1 bits (126), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 167/401 (41%), Gaps = 65/401 (16%)

Query: 2   ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAVRKY 61
           IS LPD +L +I+S L   +++ TSILSK W  LWR+   L F+ + M    ++    ++
Sbjct: 5   ISNLPDAVLCHILSFLPTKQSIVTSILSKRWKALWRSVPALHFEESLMDNNNDIETHARF 64

Query: 62  GELVSTVLNRHLCDLTMCRFRYLSPSL--NAEELAALVKFLVERNKNLISLTLECIKTRP 119
            + V         D    RF  +S S   N   + A V   ++R    + L+L       
Sbjct: 65  VQSVYAFTLSRDMDQPFRRFHLVSRSFLCNPVNVIAWVSAALQRRVENLCLSLT------ 118

Query: 120 YFPSVMLNFKSGIFSNLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIMEEQAVNDVL 179
             P   +   S +FS  C   +   L+  +N + F               ++ ++V+  L
Sbjct: 119 --PLTKMVLPSALFS--CKTLVVLKLIGGLNRNPFP--------------LDFKSVDLPL 160

Query: 180 ENCSSLERFILVESTGFKKLKIRNPSLNFLELRWLVVNEIDVFVENLHEVVIDSILCPSK 239
                L+ FIL E     +L   +P+L +L +  +  +  +   E L +++  +I     
Sbjct: 161 LTTLHLQSFIL-ERRDMAELLRGSPNLEYLFVGHMYFSGPEARFERLPKLLRATI----- 214

Query: 240 GLKIYIVDLRIFHSTCNPIAQEIQAKYLGESIMKSQDILENCSGLFESQPINIFRNLLTM 299
                      F      +   +Q  +L    M+ ++         E+  I  F+NL   
Sbjct: 215 ----------AFGHVPLEVVNNVQ--FLRIDWMEHKE---------EANLIPEFQNL--- 250

Query: 300 SIDLDLNY---IREALALSFVLRSCHCLESLDITIPVKKGSDTSDDGA-LPFPKSMFWER 355
              L+L Y    R+ + +  V++ C  L+ LDI +     +   D+GA  PFP+S+    
Sbjct: 251 -THLELGYSECTRDWVDVLEVIQRCPNLQILDIDMGSIDMTTRDDEGADWPFPRSV---- 305

Query: 356 RNCVNHKLKFVTVRGFTGKELEGKFVEHLIARAVMVKKITI 396
            + ++  LK   +R + G + E +F  +++  A  ++ + I
Sbjct: 306 PSSISLHLKTCFIRCYGGSKGELRFARYIMRNARHLRTMKI 346


>Glyma17g36600.1 
          Length = 369

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 27/220 (12%)

Query: 2   ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAV--R 59
           IS LP  ++  ++S LS+ EAVRTS+LS  W   W     L FD   +      H +   
Sbjct: 19  ISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILVFDTHCVSVASQDHMIIKN 78

Query: 60  KYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFLVER------NKNLISLTLE 113
           K   ++  VL  H   +   +F+     L+  +L  +    ++R       K++    LE
Sbjct: 79  KLLRIIDHVLLLHSGPIN--KFK-----LSHRDLIGVTD--IDRWTLHLCRKSIKEFVLE 129

Query: 114 CIKTRPYFPSVMLNFKSGIFS--NLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIME 171
             K + Y         S +FS  +L  LEL N  ++    S F+G             + 
Sbjct: 130 IWKGQRY------KIHSCLFSCQSLTHLELFNCWLK--PPSTFQGFKNLKSLDLQHVTLA 181

Query: 172 EQAVNDVLENCSSLERFILVESTGFKKLKIRNPSLNFLEL 211
           +    +++ +C  LER  L+   GF  L I  P+L F ++
Sbjct: 182 QDVFENLISSCPLLERLTLMNFDGFTNLNIDAPNLLFFDI 221


>Glyma10g34410.1 
          Length = 441

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 97/447 (21%), Positives = 176/447 (39%), Gaps = 77/447 (17%)

Query: 3   SLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDF-----------DGTRMIK 51
           SLLP+ +L  I+S L   EAVRTSILSK W+ +W ++  ++F           D T+ ++
Sbjct: 12  SLLPEIVLITIVSFLPFKEAVRTSILSKRWSKIWLSTKNIEFNELFFLNPPETDATKQLQ 71

Query: 52  RRNVHAVRKYGELVSTVLNRHLCDLTMCRF--RYLSPSLNAEELAALVKFLVERNKNLIS 109
           RR +     + + ++  ++ +    T+ +F  +  +P   A+ +   V F  ER    + 
Sbjct: 72  RRTL-----FFDFITHFMDNYRVINTVDKFSLKVSNPESCADIIERCVAFATERGVKELR 126

Query: 110 LTLECIKTRPYFPSVMLNFKSGIFSNLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXI 169
           L           P+   N       +    +L N++ R  +  A E             +
Sbjct: 127 LDFSD-------PTWEENEDDDNDHHDALFQLPNHVYRHASLEALELYACGFAMPDMCNL 179

Query: 170 ME---------EQAVNDVLENCSSLERFILVESTGFKKLKIRNPSLNFLELRWLVVNEID 220
           +E         E + N V    S+L +   +E+   KK      +L   ++R   V    
Sbjct: 180 VELKDVSFGWIEMSTNTVKTLLSTLGK---LENLSMKKCW----NLEHFDMRTQEVGLRR 232

Query: 221 VFVENLHEVVIDSILCPSKGLKI--YIVDLRIFHSTCNP-IAQEIQAKY--------LGE 269
           + ++  H V+ D +   +  LK   Y   L IF     P + QE Q  +         G+
Sbjct: 233 LVIDKCHFVISDYVDLRAPNLKFLKYSGKLGIFEVKALPEVVQEAQLDFTPMPKFEEYGD 292

Query: 270 SI------MKSQDILENCSGLFESQPINIFRNLLTMSIDLDLNYI--------REALALS 315
            +      +    +L  CS L ++ P       + M  D+++ ++        +E     
Sbjct: 293 ELCQLLLDLSGVRVLTVCSFLLQALPTG--EEQMRMQHDMEVRHLLVNTDLDNQELFGFV 350

Query: 316 FVLRSCHCLESLDITIPVKKGSDTSDDGALPFPKSMF------WERRNCVNHKLKFVTVR 369
            +L SC  LE L  T+ + +G    D+   P+P          +    CV   LK V + 
Sbjct: 351 LLLSSCVYLEKL--TLDIGQGK-IYDEHVKPYPFDFAKFCCDQYAIFECVKDNLKVVEIN 407

Query: 370 GFTGKELEGKFVEHLIARAVMVKKITI 396
           G    + E +   +LI    +++K+ I
Sbjct: 408 GSRASKNELRLCFYLIQVGCVLEKLII 434


>Glyma18g35370.1 
          Length = 409

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 1/112 (0%)

Query: 2   ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAVRKY 61
           IS LPD +L  I+S L   +AV T ILSK W PLW   S LDFD     +  +   +  +
Sbjct: 22  ISHLPDVLLLQILSLLPTKQAVITGILSKRWRPLWPAVSVLDFDDESSPEFHHPGGLTGF 81

Query: 62  GELVSTVLNRHLCD-LTMCRFRYLSPSLNAEELAALVKFLVERNKNLISLTL 112
            E V +VL  H    +   R R  +P+ +A ++A  +  +  R    + L+L
Sbjct: 82  AEFVYSVLLLHDAPAIERFRLRCANPNYSARDIATWLCHVARRRAERVELSL 133


>Glyma02g14070.1 
          Length = 386

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 17/215 (7%)

Query: 2   ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAVRKY 61
           IS LP  ++ +I+  L + + VRTS+LS  W   W +   LDF      K R++  + + 
Sbjct: 4   ISDLPSHLIDFILQRLQLQDVVRTSLLSSKWRYKWTSVPKLDFSNDFFQKCRDLE-LHEV 62

Query: 62  GELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKF-LVERNKNLISLTLECIKTRPY 120
              ++ +L  H  D  +  F    P     ++ +L K+ L    K +  L L  ++T P 
Sbjct: 63  SSTITEILLIH--DGPLDEFVLCIPENVPIKIESLNKWILCLSRKGIKELELWNLQTDP- 119

Query: 121 FPSVMLNFKSGIFS--NLCSLELNNYLMRRV-NASAFEGCXXXXXXXXXXXIMEEQAVND 177
                    S IFS   L  L+L N+ +  V N S+F+             I+ E +  D
Sbjct: 120 -----CETPSHIFSCQGLTYLQLQNFKLSTVPNFSSFKS----LVYLILVDIIFESSAID 170

Query: 178 VLENCSSLERFILVESTGFKKLKIRNPSLNFLELR 212
           ++  C SLE   +   +GF+ + + +P+L  L ++
Sbjct: 171 LMFGCPSLEMLSISYCSGFECINVSSPALEVLHVQ 205


>Glyma08g46590.1 
          Length = 515

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 5/132 (3%)

Query: 2   ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAVRKY 61
           IS LPD +L +I+S L   +++ TSILSK W  LWR+   L F+ + M    ++    ++
Sbjct: 183 ISNLPDAVLCHILSFLPTKQSIVTSILSKRWKALWRSVPALHFEESLMDNNNDIETHARF 242

Query: 62  GELV-STVLNRHLCDLTMCRFRYLSPSL--NAEELAALVKFLVERNKNLISLTLECIKTR 118
            + V +  L+R + D    RF  +S S   N   + A V   ++R    + L+L  + T+
Sbjct: 243 VQSVYAFTLSRDM-DQPFRRFHLVSRSFLCNPVNVIAWVSAALQRRVENLCLSLTPL-TK 300

Query: 119 PYFPSVMLNFKS 130
              PS + + K+
Sbjct: 301 MVLPSALFSCKT 312