Miyakogusa Predicted Gene
- Lj0g3v0286519.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0286519.1 Non Chatacterized Hit- tr|G7JQJ9|G7JQJ9_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,56.32,2e-18,F-box domain,F-box domain, cyclin-like;
FBOX,F-box domain, cyclin-like; seg,NULL; no
description,NUL,gene.g22301.t1.1
(454 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g33610.1 89 7e-18
Glyma13g35940.1 81 2e-15
Glyma08g17900.1 75 1e-13
Glyma18g35360.1 59 1e-08
Glyma12g07320.1 55 2e-07
Glyma08g46320.1 55 2e-07
Glyma08g46590.2 53 7e-07
Glyma17g36600.1 52 1e-06
Glyma10g34410.1 52 2e-06
Glyma18g35370.1 51 3e-06
Glyma02g14070.1 50 3e-06
Glyma08g46590.1 50 6e-06
>Glyma13g33610.1
Length = 209
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 112/248 (45%), Gaps = 52/248 (20%)
Query: 1 MISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRM---------IK 51
MIS LPDEI T I+S L +DEAVR S+LSKTW LW+ S ++ + T M I
Sbjct: 4 MISNLPDEIKTNILSKLCIDEAVRCSVLSKTWKGLWKGMSHMELNATNMPRTFPDFSAIA 63
Query: 52 RRNVHAVRKYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFLVERNKNLISLT 111
+ +V Y LV +L HL ++ CR ++ SL E + V+ L+ +
Sbjct: 64 PPMLKSVIGYNALVVPLLFNHLGVISSCRIQHFKKSLAFEHVENWVEILIMPEE------ 117
Query: 112 LECIKTRPYFPSVMLNFKSGIFSNLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIME 171
Y P F+ G F L SLEL NY +
Sbjct: 118 ------YTYIP----RFRHGAFECLASLELINYTL------------------------- 142
Query: 172 EQAVNDVLENCSSLERFILVESTGFKKLKIRNPSLNFLELRWLVVNEIDVFVENLHEVVI 231
+ LE CS L+R + ++ I +L L+L+ L V+E+ + ENL +++
Sbjct: 143 -NSWIPFLE-CSQLKRLKMKSIYLDDRVIIMRSTLKVLQLQALCVDELQISCENLDVMML 200
Query: 232 DSILCPSK 239
DSI+CP +
Sbjct: 201 DSIICPMQ 208
>Glyma13g35940.1
Length = 261
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 18/248 (7%)
Query: 1 MISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKR----RNVH 56
+IS LPD +L IIS L +E VRT +LS W +W++ L D ++M + ++
Sbjct: 21 LISTLPDSVLVSIISLLPCNEGVRTCVLSNRWKTMWKHVPHLSLDQSKMGDQEKDFEDLD 80
Query: 57 AVRKYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFLVERNKNLISLTLECIK 116
+ K L+ +VL+ H+ L C R+L S + + ++ L+++NK + L
Sbjct: 81 EIAKAEVLIDSVLDSHVVSLESCTIRHLPESCASGKAVMWIEKLLKQNKESLPRVL---- 136
Query: 117 TRPYFPSVMLNFKSGIFSNLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIMEEQAVN 176
R + ++ L FK IFS +LEL NY + + + S+ + C +++ A
Sbjct: 137 -RYHGRTLDLPFK--IFSGFEALELKNYFL-KTSPSSNDSCQVLTTLAFRNMSVKKDAWE 192
Query: 177 DVLENCSSLERFILVESTG-----FKKLKIRNPSLNFLELRWLVVNEIDVFVENLHEVVI 231
+L C LE L T +++ I +P L FL + + +N ++ + + V+
Sbjct: 193 GILSCCLCLENLTLENVTHDNCKLMREVTINSPRLKFLRICRMQMNGFKMYYKRTNPVIT 252
Query: 232 DSILCPSK 239
LC S+
Sbjct: 253 PE-LCSSE 259
>Glyma08g17900.1
Length = 243
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 17/243 (6%)
Query: 1 MISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIK---RRNVHA 57
+IS LPD ++ IIS L E VRT + SK W W + S L+ D +M+K + N+
Sbjct: 2 LISALPDPLVGAIISLLPNTEGVRTCVFSKRWKKAWMHMSHLNIDQVQMMKPFIQANLCG 61
Query: 58 VRKYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFLVERNKNLISLTLECIKT 117
V + L+ +VLN H L C R+L S + + + + +N + +K
Sbjct: 62 VH-HKRLIISVLNSHSHPLESCNIRHLPESCASGNQTDPIHWDILQN------APQGVK- 113
Query: 118 RPYFPSVMLNFKSGIFSNLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIMEEQAVND 177
+ + ++ IFS+ LEL NY + + S+ + ++++
Sbjct: 114 ---YHEMTIDLPFEIFSSFEELELKNYYL-KTKPSSGDFAQVLKKLTFKNMMVDKDDWEG 169
Query: 178 VLENCSSLERFILVESTGFKKLKIRNPSLNFLELRWLVVNEIDVFVENLHEVVIDSILC- 236
++ C LE + +++ + +KI NP L FL + + V +IDV NL + ID+++C
Sbjct: 170 IMSYCLCLEN-LTIDNCMMEIIKINNPRLKFLRICRMEVIKIDVSAINLEIIEIDTVVCK 228
Query: 237 PSK 239
P K
Sbjct: 229 PQK 231
>Glyma18g35360.1
Length = 357
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 2 ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAVRKY 61
IS LP+E+L +I+S L +AV T ILSK W PLWR+ S LDF+ +++R +
Sbjct: 8 ISSLPNELLCHILSFLPTKQAVATGILSKRWGPLWRSVSTLDFNDESYLQKRTFFYWYRS 67
Query: 62 GELVSTVLNR 71
+ V TV+ R
Sbjct: 68 VQSVYTVMLR 77
>Glyma12g07320.1
Length = 340
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 105/253 (41%), Gaps = 71/253 (28%)
Query: 1 MISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWR-NSSCLDFDGTRMIKRRNVHAVR 59
+IS +PD+IL I+S L++ EA RTS+L+ W W S LDFD + RN H R
Sbjct: 12 IISTMPDDILGDILSRLTLKEAARTSVLATKWRYHWTFFSGLLDFDHS----LRNFHLRR 67
Query: 60 KYGELVSTVLNRHLCDLTMCR---FRYLSPSL----------NAEELAALVKFLVERNKN 106
+ H+ LT C + + S SL + +A VK+ E++
Sbjct: 68 E-----------HVGILTKCNVFVYEWESSSLQGLRICMDLGDPWRVAEWVKYAAEKHVQ 116
Query: 107 LISLTLECIKTRPY-----------FPSVMLNFKSGIFSNLCSLELNNYLMRRVNASAFE 155
+ L + P+ FPS KS LC+L L++ V+ S
Sbjct: 117 TLDLDFSYHFSVPFYEISLTIVHNVFPSRGYEMKS-----LCNLRLSS-----VDVSG-- 164
Query: 156 GCXXXXXXXXXXXIMEEQAVNDVLENCSSLERFILVESTGFKKLKIRNPSLNF--LELRW 213
+ + +L +C LE ++ES +LK+R +L LEL
Sbjct: 165 -----------------EVIEGLLASCPLLESICVIESKRLVRLKVRGEALRLKHLELVE 207
Query: 214 LVVNEIDVFVENL 226
+ ++D++ NL
Sbjct: 208 CRIMDLDIYAVNL 220
>Glyma08g46320.1
Length = 379
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 11/147 (7%)
Query: 2 ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAV--- 58
IS LPDE+L +I+S LS EA+ TS++SK W PLW + LD D I+ ++
Sbjct: 7 ISALPDEVLGHILSFLSTQEAISTSLVSKRWQPLWLSIPILDLDDITFIQNGKSYSSFFN 66
Query: 59 RKYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFLVER--NKNLISLTLECIK 116
+G L++ + + L + R R+ S + + K V + L L +E
Sbjct: 67 FAFGSLLARNVQQ---PLKLARLRFNSCGYDNNFPYSHFKIWVNAVIQRGLEHLQIEM-- 121
Query: 117 TRPY-FPSVMLNFKSGIFSNLCSLELN 142
RP+ P+++LN K+ + L +N
Sbjct: 122 PRPFELPNIILNCKTLVVLKLYRFRVN 148
>Glyma08g46590.2
Length = 380
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 167/401 (41%), Gaps = 65/401 (16%)
Query: 2 ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAVRKY 61
IS LPD +L +I+S L +++ TSILSK W LWR+ L F+ + M ++ ++
Sbjct: 5 ISNLPDAVLCHILSFLPTKQSIVTSILSKRWKALWRSVPALHFEESLMDNNNDIETHARF 64
Query: 62 GELVSTVLNRHLCDLTMCRFRYLSPSL--NAEELAALVKFLVERNKNLISLTLECIKTRP 119
+ V D RF +S S N + A V ++R + L+L
Sbjct: 65 VQSVYAFTLSRDMDQPFRRFHLVSRSFLCNPVNVIAWVSAALQRRVENLCLSLT------ 118
Query: 120 YFPSVMLNFKSGIFSNLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIMEEQAVNDVL 179
P + S +FS C + L+ +N + F ++ ++V+ L
Sbjct: 119 --PLTKMVLPSALFS--CKTLVVLKLIGGLNRNPFP--------------LDFKSVDLPL 160
Query: 180 ENCSSLERFILVESTGFKKLKIRNPSLNFLELRWLVVNEIDVFVENLHEVVIDSILCPSK 239
L+ FIL E +L +P+L +L + + + + E L +++ +I
Sbjct: 161 LTTLHLQSFIL-ERRDMAELLRGSPNLEYLFVGHMYFSGPEARFERLPKLLRATI----- 214
Query: 240 GLKIYIVDLRIFHSTCNPIAQEIQAKYLGESIMKSQDILENCSGLFESQPINIFRNLLTM 299
F + +Q +L M+ ++ E+ I F+NL
Sbjct: 215 ----------AFGHVPLEVVNNVQ--FLRIDWMEHKE---------EANLIPEFQNL--- 250
Query: 300 SIDLDLNY---IREALALSFVLRSCHCLESLDITIPVKKGSDTSDDGA-LPFPKSMFWER 355
L+L Y R+ + + V++ C L+ LDI + + D+GA PFP+S+
Sbjct: 251 -THLELGYSECTRDWVDVLEVIQRCPNLQILDIDMGSIDMTTRDDEGADWPFPRSV---- 305
Query: 356 RNCVNHKLKFVTVRGFTGKELEGKFVEHLIARAVMVKKITI 396
+ ++ LK +R + G + E +F +++ A ++ + I
Sbjct: 306 PSSISLHLKTCFIRCYGGSKGELRFARYIMRNARHLRTMKI 346
>Glyma17g36600.1
Length = 369
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 2 ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAV--R 59
IS LP ++ ++S LS+ EAVRTS+LS W W L FD + H +
Sbjct: 19 ISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILVFDTHCVSVASQDHMIIKN 78
Query: 60 KYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFLVER------NKNLISLTLE 113
K ++ VL H + +F+ L+ +L + ++R K++ LE
Sbjct: 79 KLLRIIDHVLLLHSGPIN--KFK-----LSHRDLIGVTD--IDRWTLHLCRKSIKEFVLE 129
Query: 114 CIKTRPYFPSVMLNFKSGIFS--NLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIME 171
K + Y S +FS +L LEL N ++ S F+G +
Sbjct: 130 IWKGQRY------KIHSCLFSCQSLTHLELFNCWLK--PPSTFQGFKNLKSLDLQHVTLA 181
Query: 172 EQAVNDVLENCSSLERFILVESTGFKKLKIRNPSLNFLEL 211
+ +++ +C LER L+ GF L I P+L F ++
Sbjct: 182 QDVFENLISSCPLLERLTLMNFDGFTNLNIDAPNLLFFDI 221
>Glyma10g34410.1
Length = 441
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 176/447 (39%), Gaps = 77/447 (17%)
Query: 3 SLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDF-----------DGTRMIK 51
SLLP+ +L I+S L EAVRTSILSK W+ +W ++ ++F D T+ ++
Sbjct: 12 SLLPEIVLITIVSFLPFKEAVRTSILSKRWSKIWLSTKNIEFNELFFLNPPETDATKQLQ 71
Query: 52 RRNVHAVRKYGELVSTVLNRHLCDLTMCRF--RYLSPSLNAEELAALVKFLVERNKNLIS 109
RR + + + ++ ++ + T+ +F + +P A+ + V F ER +
Sbjct: 72 RRTL-----FFDFITHFMDNYRVINTVDKFSLKVSNPESCADIIERCVAFATERGVKELR 126
Query: 110 LTLECIKTRPYFPSVMLNFKSGIFSNLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXI 169
L P+ N + +L N++ R + A E +
Sbjct: 127 LDFSD-------PTWEENEDDDNDHHDALFQLPNHVYRHASLEALELYACGFAMPDMCNL 179
Query: 170 ME---------EQAVNDVLENCSSLERFILVESTGFKKLKIRNPSLNFLELRWLVVNEID 220
+E E + N V S+L + +E+ KK +L ++R V
Sbjct: 180 VELKDVSFGWIEMSTNTVKTLLSTLGK---LENLSMKKCW----NLEHFDMRTQEVGLRR 232
Query: 221 VFVENLHEVVIDSILCPSKGLKI--YIVDLRIFHSTCNP-IAQEIQAKY--------LGE 269
+ ++ H V+ D + + LK Y L IF P + QE Q + G+
Sbjct: 233 LVIDKCHFVISDYVDLRAPNLKFLKYSGKLGIFEVKALPEVVQEAQLDFTPMPKFEEYGD 292
Query: 270 SI------MKSQDILENCSGLFESQPINIFRNLLTMSIDLDLNYI--------REALALS 315
+ + +L CS L ++ P + M D+++ ++ +E
Sbjct: 293 ELCQLLLDLSGVRVLTVCSFLLQALPTG--EEQMRMQHDMEVRHLLVNTDLDNQELFGFV 350
Query: 316 FVLRSCHCLESLDITIPVKKGSDTSDDGALPFPKSMF------WERRNCVNHKLKFVTVR 369
+L SC LE L T+ + +G D+ P+P + CV LK V +
Sbjct: 351 LLLSSCVYLEKL--TLDIGQGK-IYDEHVKPYPFDFAKFCCDQYAIFECVKDNLKVVEIN 407
Query: 370 GFTGKELEGKFVEHLIARAVMVKKITI 396
G + E + +LI +++K+ I
Sbjct: 408 GSRASKNELRLCFYLIQVGCVLEKLII 434
>Glyma18g35370.1
Length = 409
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 2 ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAVRKY 61
IS LPD +L I+S L +AV T ILSK W PLW S LDFD + + + +
Sbjct: 22 ISHLPDVLLLQILSLLPTKQAVITGILSKRWRPLWPAVSVLDFDDESSPEFHHPGGLTGF 81
Query: 62 GELVSTVLNRHLCD-LTMCRFRYLSPSLNAEELAALVKFLVERNKNLISLTL 112
E V +VL H + R R +P+ +A ++A + + R + L+L
Sbjct: 82 AEFVYSVLLLHDAPAIERFRLRCANPNYSARDIATWLCHVARRRAERVELSL 133
>Glyma02g14070.1
Length = 386
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 17/215 (7%)
Query: 2 ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAVRKY 61
IS LP ++ +I+ L + + VRTS+LS W W + LDF K R++ + +
Sbjct: 4 ISDLPSHLIDFILQRLQLQDVVRTSLLSSKWRYKWTSVPKLDFSNDFFQKCRDLE-LHEV 62
Query: 62 GELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKF-LVERNKNLISLTLECIKTRPY 120
++ +L H D + F P ++ +L K+ L K + L L ++T P
Sbjct: 63 SSTITEILLIH--DGPLDEFVLCIPENVPIKIESLNKWILCLSRKGIKELELWNLQTDP- 119
Query: 121 FPSVMLNFKSGIFS--NLCSLELNNYLMRRV-NASAFEGCXXXXXXXXXXXIMEEQAVND 177
S IFS L L+L N+ + V N S+F+ I+ E + D
Sbjct: 120 -----CETPSHIFSCQGLTYLQLQNFKLSTVPNFSSFKS----LVYLILVDIIFESSAID 170
Query: 178 VLENCSSLERFILVESTGFKKLKIRNPSLNFLELR 212
++ C SLE + +GF+ + + +P+L L ++
Sbjct: 171 LMFGCPSLEMLSISYCSGFECINVSSPALEVLHVQ 205
>Glyma08g46590.1
Length = 515
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 2 ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAVRKY 61
IS LPD +L +I+S L +++ TSILSK W LWR+ L F+ + M ++ ++
Sbjct: 183 ISNLPDAVLCHILSFLPTKQSIVTSILSKRWKALWRSVPALHFEESLMDNNNDIETHARF 242
Query: 62 GELV-STVLNRHLCDLTMCRFRYLSPSL--NAEELAALVKFLVERNKNLISLTLECIKTR 118
+ V + L+R + D RF +S S N + A V ++R + L+L + T+
Sbjct: 243 VQSVYAFTLSRDM-DQPFRRFHLVSRSFLCNPVNVIAWVSAALQRRVENLCLSLTPL-TK 300
Query: 119 PYFPSVMLNFKS 130
PS + + K+
Sbjct: 301 MVLPSALFSCKT 312