Miyakogusa Predicted Gene

Lj0g3v0286379.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0286379.1 Non Chatacterized Hit- tr|I1Q9I8|I1Q9I8_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,37.74,0.0000000000005,FAMILY NOT NAMED,NULL; no
description,Nucleotide-binding, alpha-beta plait;
seg,NULL,CUFF.19101.1
         (197 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g08650.2                                                       275   2e-74
Glyma11g08650.1                                                       275   2e-74

>Glyma11g08650.2 
          Length = 203

 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 131/197 (66%), Positives = 159/197 (80%), Gaps = 1/197 (0%)

Query: 1   MGSSEEEFAAFEQKVRRTVYFDNLSPQVTESVMRTALDQFATVKSVKFIPNYLGPS-LPQ 59
           M SS E++AAF+QKV RTVY DN+SPQVTESV+RTALDQFATVK+VKFIPNY+GPS  PQ
Sbjct: 1   MESSAEKYAAFKQKVSRTVYLDNMSPQVTESVIRTALDQFATVKNVKFIPNYIGPSNQPQ 60

Query: 60  TALVELDSSKKVEDIVTMIGQYPFMMSGMPRPVRARPAVIEMFDDRPVNPNRKVEYRWLE 119
            ALVELDS+KK ++I++MI  YPFMMSG PRPVRARPAV+EMFDD+P+ PNRK++ RWLE
Sbjct: 61  CALVELDSAKKAKEILSMIAGYPFMMSGQPRPVRARPAVMEMFDDQPIKPNRKIKIRWLE 120

Query: 120 PSDPDMEVAKQLKNLTRKHAAEIAHMHXXXXXXXXXXXXXXXXXLKMHHKKFKMIDGIIT 179
           PSDPD E+AK++KNLTRKHAAE+  +                  LK+H+KKFKMI+GI+ 
Sbjct: 121 PSDPDFELAKEVKNLTRKHAAEVEFLDKLLLEDEEKLAKQQEETLKVHYKKFKMIEGIMA 180

Query: 180 DTSAIRLARKYNLNVGD 196
           D +A RLARKYNL+V D
Sbjct: 181 DKTAHRLARKYNLHVAD 197


>Glyma11g08650.1 
          Length = 203

 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 131/197 (66%), Positives = 159/197 (80%), Gaps = 1/197 (0%)

Query: 1   MGSSEEEFAAFEQKVRRTVYFDNLSPQVTESVMRTALDQFATVKSVKFIPNYLGPS-LPQ 59
           M SS E++AAF+QKV RTVY DN+SPQVTESV+RTALDQFATVK+VKFIPNY+GPS  PQ
Sbjct: 1   MESSAEKYAAFKQKVSRTVYLDNMSPQVTESVIRTALDQFATVKNVKFIPNYIGPSNQPQ 60

Query: 60  TALVELDSSKKVEDIVTMIGQYPFMMSGMPRPVRARPAVIEMFDDRPVNPNRKVEYRWLE 119
            ALVELDS+KK ++I++MI  YPFMMSG PRPVRARPAV+EMFDD+P+ PNRK++ RWLE
Sbjct: 61  CALVELDSAKKAKEILSMIAGYPFMMSGQPRPVRARPAVMEMFDDQPIKPNRKIKIRWLE 120

Query: 120 PSDPDMEVAKQLKNLTRKHAAEIAHMHXXXXXXXXXXXXXXXXXLKMHHKKFKMIDGIIT 179
           PSDPD E+AK++KNLTRKHAAE+  +                  LK+H+KKFKMI+GI+ 
Sbjct: 121 PSDPDFELAKEVKNLTRKHAAEVEFLDKLLLEDEEKLAKQQEETLKVHYKKFKMIEGIMA 180

Query: 180 DTSAIRLARKYNLNVGD 196
           D +A RLARKYNL+V D
Sbjct: 181 DKTAHRLARKYNLHVAD 197