Miyakogusa Predicted Gene
- Lj0g3v0285849.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0285849.1 tr|A5X7X9|A5X7X9_PERAE MADS-box transcription
factor Pe.am.AGL6.2 (Fragment) OS=Persea americana PE=,48.51,4e-19,
,gene.g22234.t1.1
(101 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g08890.1 153 4e-38
Glyma03g02210.1 150 3e-37
Glyma11g36890.4 47 4e-06
Glyma11g36890.1 47 4e-06
Glyma11g36890.3 47 4e-06
>Glyma07g08890.1
Length = 245
Score = 153 bits (387), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 86/103 (83%), Gaps = 3/103 (2%)
Query: 1 MIEQMEELRTRERHLGDLNKQLKLKLESEGYNPKVMENLWSSTSAAGTSNFPF-HPAQSN 59
MIEQMEELR RERHLGD+NKQL+LKLE+EG+N K ME+L SSTS AG S F F P Q+N
Sbjct: 144 MIEQMEELRRRERHLGDMNKQLRLKLEAEGFNLKAMESLLSSTSEAGNSGFHFQQPPQTN 203
Query: 60 PMDC-QPEPFLQIGYHQYVQAESSSIPKNSMTCETNFMHGWML 101
PMD Q EPFLQIGYHQYVQAE+S++PK SM CETNFM GW+L
Sbjct: 204 PMDYQQAEPFLQIGYHQYVQAEASNVPK-SMACETNFMQGWIL 245
>Glyma03g02210.1
Length = 245
Score = 150 bits (379), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 86/103 (83%), Gaps = 3/103 (2%)
Query: 1 MIEQMEELRTRERHLGDLNKQLKLKLESEGYNPKVMENLWSSTSAAGTSNFPF-HPAQSN 59
MIEQMEELR RERHLGD+NKQL+LKLE+EG+N K E+L S TSAAG S F F P Q+N
Sbjct: 144 MIEQMEELRRRERHLGDMNKQLRLKLEAEGFNLKATESLLSFTSAAGNSGFHFQQPPQTN 203
Query: 60 PMDC-QPEPFLQIGYHQYVQAESSSIPKNSMTCETNFMHGWML 101
P+D QPEPFLQIGYHQYVQ+E+S++PK SM CETNFM GW+L
Sbjct: 204 PIDYQQPEPFLQIGYHQYVQSEASNVPK-SMACETNFMQGWIL 245
>Glyma11g36890.4
Length = 179
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 1 MIEQMEELRTRERHLGDLNKQLKLKLESEGYNPKVMENLWSSTSAAGTSNFPFHP---AQ 57
M++Q+ +L+ +E LG+ N+ L +LE NP L S G +P P A
Sbjct: 86 MLDQLSDLQRKEHFLGESNRDLIQRLEEFQINPL---QLNPSAEEMGHGRYPGQPQGHAL 142
Query: 58 SNPMDCQPEPFLQIGYHQYVQAESSSIPKNSMTCETNFMHGWM 100
P+DC EP LQIGYH + S P SM N+M GW+
Sbjct: 143 FQPLDC--EPTLQIGYHPDPVSVVSEGP--SM---NNYMAGWL 178
>Glyma11g36890.1
Length = 243
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 1 MIEQMEELRTRERHLGDLNKQLKLKLESEGYNPKVMENLWSSTSAAGTSNFPFHP---AQ 57
M++Q+ +L+ +E LG+ N+ L +LE NP L S G +P P A
Sbjct: 150 MLDQLSDLQRKEHFLGESNRDLIQRLEEFQINPL---QLNPSAEEMGHGRYPGQPQGHAL 206
Query: 58 SNPMDCQPEPFLQIGYHQYVQAESSSIPKNSMTCETNFMHGWM 100
P+DC EP LQIGYH + S P SM N+M GW+
Sbjct: 207 FQPLDC--EPTLQIGYHPDPVSVVSEGP--SM---NNYMAGWL 242
>Glyma11g36890.3
Length = 241
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 1 MIEQMEELRTRERHLGDLNKQLKLKLESEGYNPKVMENLWSSTSAAGTSNFPFHP---AQ 57
M++Q+ +L+ +E LG+ N+ L +LE NP L S G +P P A
Sbjct: 148 MLDQLSDLQRKEHFLGESNRDLIQRLEEFQINPL---QLNPSAEEMGHGRYPGQPQGHAL 204
Query: 58 SNPMDCQPEPFLQIGYHQYVQAESSSIPKNSMTCETNFMHGWM 100
P+DC EP LQIGYH + S P SM N+M GW+
Sbjct: 205 FQPLDC--EPTLQIGYHPDPVSVVSEGP--SM---NNYMAGWL 240