Miyakogusa Predicted Gene
- Lj0g3v0285529.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0285529.1 Non Chatacterized Hit- tr|C5XRC0|C5XRC0_SORBI
Putative uncharacterized protein Sb03g041420
OS=Sorghu,45.13,1e-16,coiled-coil,NULL,CUFF.19050.1
(327 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g02370.1 471 e-133
Glyma14g33790.1 453 e-127
Glyma06g11290.1 452 e-127
Glyma12g29180.1 340 1e-93
Glyma08g13390.1 337 1e-92
Glyma08g20040.1 335 3e-92
Glyma04g43370.1 189 3e-48
Glyma01g05280.1 119 4e-27
Glyma15g35090.1 81 1e-15
Glyma05g30220.1 65 8e-11
Glyma09g10000.1 61 2e-09
>Glyma13g02370.1
Length = 313
Score = 471 bits (1212), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/329 (71%), Positives = 281/329 (85%), Gaps = 18/329 (5%)
Query: 1 MDPCPSSTNTNSVSGFYTFLTRGIEDLDRAFVSSTNNFTMSIQFLQRALSILRSFHTHLT 60
MDPCPSS NTN+V+GFYTF++RG+E+L+RAF+++ NNF +S+QFLQ+ +S+LRS HT LT
Sbjct: 1 MDPCPSS-NTNTVNGFYTFVSRGMEELERAFLAN-NNF-ISVQFLQKVVSLLRSLHTQLT 57
Query: 61 LLVQKLHLPVGDKWLDEYMDETSKLWETCHVLKSGVSGIEGYYSAGLNITSSFDS-HPHL 119
LLV KL LP+GDKWLDEYMDETSKLWET H+LKS +S E +YS G N+ SS DS HPHL
Sbjct: 58 LLVHKLQLPLGDKWLDEYMDETSKLWETSHLLKSAISNFEPFYSQGFNLLSSLDSSHPHL 117
Query: 120 TPQLWRQVLRAISACRREAVGLEEENRSLMETRIHTLPLHFDERVSMESKLNGFNGFRGV 179
+PQ ++RAIS CRREA+GLEE+NR+LMETRIHTL L DERVS+ESKLNGFNGFRGV
Sbjct: 118 SPQ----IVRAISGCRREALGLEEQNRALMETRIHTLCLRLDERVSVESKLNGFNGFRGV 173
Query: 180 LYAMRNISSMLLTILLQGLVYRCPDTPDMVLGGYEGGRLFLGSGLMVSAARLQQKVAAEI 239
LYAMRN+SSMLL ILL GLVY P+T ++V GGYEGGR+FLGS +MVSAARL+Q+VA E+
Sbjct: 174 LYAMRNVSSMLLMILLHGLVYCWPETSELVAGGYEGGRMFLGSAVMVSAARLRQRVAVEM 233
Query: 240 -GGAQPGMLLYEFRRSRVAVEELRGELERWGSQHVEWEMEVGLRERVENLRMCFGVLKSG 298
G A PG+LLYEFRR+RVAVEELRGELE E E G+RERVE++R+CFGVL+SG
Sbjct: 234 RGAAGPGILLYEFRRARVAVEELRGELE---------EAEGGVRERVESVRVCFGVLRSG 284
Query: 299 AESVVCQLDDFFDEIVEGRKKLLDFCSHR 327
AE++VCQLDDFFDEIVEGRKKLLDFCSHR
Sbjct: 285 AENIVCQLDDFFDEIVEGRKKLLDFCSHR 313
>Glyma14g33790.1
Length = 304
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/329 (70%), Positives = 273/329 (82%), Gaps = 27/329 (8%)
Query: 1 MDPCPSSTNTNSVSGFYTFLTRGIEDLDRAFVSSTNNFTMSIQFLQRALSILRSFHTHLT 60
MDPCPSS NTN+V+GFYTF++RG+E+L+RAF++ NN +S+QFLQ+ LS+LRS HT LT
Sbjct: 1 MDPCPSS-NTNTVNGFYTFVSRGMEELERAFLA--NNSFISLQFLQKVLSLLRSLHTQLT 57
Query: 61 LLVQKLHLPVGDKWLDEYMDETSKLWETCHVLKSGVSGIEGYYSAGLNITSSFDS-HPHL 119
LLV KLHLP+GDKWLDEYMDETSKLWET H+LKS +S E +YS G N+ SS DS HP
Sbjct: 58 LLVHKLHLPLGDKWLDEYMDETSKLWETSHLLKSAISNFEPFYSQGFNLLSSLDSSHP-- 115
Query: 120 TPQLWRQVLRAISACRREAVGLEEENRSLMETRIHTLPLHFDERVSMESKLNGFNGFRGV 179
QV+RAIS CRREA+GLEE+NR+LMETR+HTL L DERVS+ESKLNGFNGFRGV
Sbjct: 116 ------QVVRAISGCRREALGLEEQNRALMETRVHTLCLRLDERVSVESKLNGFNGFRGV 169
Query: 180 LYAMRNISSMLLTILLQGLVYRCPDTPDMVLGGYEGGRLFLGSGLMVSAARLQQKVAAEI 239
LYAMRN+SSMLL ILL GLVY P+T ++V GGYEGGR+FLG SAARL+Q+VAAE+
Sbjct: 170 LYAMRNVSSMLLMILLHGLVYCWPETSELVSGGYEGGRMFLG-----SAARLRQRVAAEM 224
Query: 240 -GGAQPGMLLYEFRRSRVAVEELRGELERWGSQHVEWEMEVGLRERVENLRMCFGVLKSG 298
G A PG+LLYEFRR+RVAVEELRGELE E E G+RERVE++R+CFGVL+SG
Sbjct: 225 RGAAGPGILLYEFRRARVAVEELRGELE---------EAEGGVRERVESVRVCFGVLRSG 275
Query: 299 AESVVCQLDDFFDEIVEGRKKLLDFCSHR 327
AE++VCQLDDFFDEIVEGRKKLLDFCSHR
Sbjct: 276 AENIVCQLDDFFDEIVEGRKKLLDFCSHR 304
>Glyma06g11290.1
Length = 321
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/332 (73%), Positives = 278/332 (83%), Gaps = 16/332 (4%)
Query: 1 MDPCPSSTNTNSVSGFYTFLTRGIEDLDRAFVSSTNNFTMSIQFLQRALSILRSFHTHLT 60
MDP +SV+GFY+FLTRGI+DL+ F+S+ NF MSIQFLQRALS+LRSFHT LT
Sbjct: 1 MDP-------SSVNGFYSFLTRGIDDLESVFLST--NF-MSIQFLQRALSLLRSFHTQLT 50
Query: 61 LLVQKLHLPVGDKWLDEYMDETSKLWETCHVLKSGVSGIEGYYSAGLNITSSFDSHPHLT 120
LLVQKLHLPVGDKWLDEYMDE+SKLW+ CHV+KSG+S I+ YYSA LNITSS DSH +T
Sbjct: 51 LLVQKLHLPVGDKWLDEYMDESSKLWDACHVIKSGISSIDTYYSAALNITSSLDSHRPIT 110
Query: 121 PQLWRQVLRAISACRREAVGLEEENRSLMETRIHTLPLHFDERVSMESKLNGFNGFRGVL 180
PQL RQV+RAI+ CRREAVGLEEENR LME RI L L F+ERVS+ESKLNGFNGFRGVL
Sbjct: 111 PQLSRQVIRAIAGCRREAVGLEEENRGLMEARIQPLSLRFEERVSIESKLNGFNGFRGVL 170
Query: 181 YAMRNISSMLLTILLQGLVYRCPDTPDMVLG--GYEGGRLFLGSGLMVSAARLQQKVAAE 238
YAMRN+SS+LL +LL GLVY D+ D VLG GYEG LFLGS M+S ARLQQ+VAAE
Sbjct: 171 YAMRNVSSLLLMVLLYGLVYCYGDSSDFVLGGCGYEGC-LFLGSAFMMSTARLQQRVAAE 229
Query: 239 IG--GAQPGMLLYEFRRSRVAVEELRGELERWGSQ-HVEWEMEVGLRERVENLRMCFGVL 295
IG G GMLL+EFRRS+VA+EELRGELER GSQ VEWE EV +RERVENLR CFGVL
Sbjct: 230 IGHMGGAQGMLLHEFRRSKVAMEELRGELERRGSQGGVEWESEVAIRERVENLRACFGVL 289
Query: 296 KSGAESVVCQLDDFFDEIVEGRKKLLDFCSHR 327
+SGA+++V QLDDFFDEIVEGRK+LLDFCSHR
Sbjct: 290 RSGADNIVAQLDDFFDEIVEGRKRLLDFCSHR 321
>Glyma12g29180.1
Length = 312
Score = 340 bits (871), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/323 (57%), Positives = 242/323 (74%), Gaps = 16/323 (4%)
Query: 8 TNTNSVSGFYTFLTRGIEDLDRAFVSSTNNFTMSIQFLQRALSILRSFHTHLTLLVQKLH 67
TNT SVSGFY FLT+G+ +L ++F+S + MS QFL + +S L+SFH+ LT+LV+KL
Sbjct: 3 TNT-SVSGFYNFLTQGLNELHQSFLSHS---FMSFQFLSQVISSLQSFHSQLTILVRKLR 58
Query: 68 LPVGDKWLDEYMDETSKLWETCHVLKSGVSGIEGYYSAGLNITSSFDSHPHLTPQLWRQV 127
LPVG KWLDEYMDE+S+LW+ CHVLKS +SG+E YYSA NI SS D + H TP+L RQV
Sbjct: 59 LPVGGKWLDEYMDESSRLWDACHVLKSAISGMENYYSAASNIASSLDGYHHFTPELSRQV 118
Query: 128 LRAISACRREAVGLEEENRSLMETRIHTLPLHFDERVSMESKLNGFNGFRGVLYAMRNIS 187
+RAI+ C+R+ +GLEEEN+SLMETRI L + +SMESKLNGF+GFRGVLYAMR++S
Sbjct: 119 IRAINVCQRDILGLEEENKSLMETRIEPLSQCLIQNISMESKLNGFSGFRGVLYAMRSVS 178
Query: 188 SMLLTILLQGLVYRCPDTPDMVLGGYEGGRLFLGSGLMVSAARLQQKVAAEIGG--AQPG 245
S+LL ILL GL Y C + GY+G +F GS MVS A LQQKVA EI QPG
Sbjct: 179 SLLLMILLNGLAY-CWSSC-CFHQGYDGHMVF-GSDFMVSMAILQQKVAEEIDQIEGQPG 235
Query: 246 MLLYEFRRSRVAVEELRGELERWGS-QHVEWEMEVGLRERVENLRMCFGVLKSGAESVVC 304
+LL+EF++++ A+EEL+ ELER S + E ++E+V+N++ CFG+L+ G +++
Sbjct: 236 ILLFEFQQAKSAMEELKVELERIASLSYAE------IQEKVDNVKSCFGLLRCGVDTITG 289
Query: 305 QLDDFFDEIVEGRKKLLDFCSHR 327
QLDDFFDEIVEGRKKLLD CSHR
Sbjct: 290 QLDDFFDEIVEGRKKLLDMCSHR 312
>Glyma08g13390.1
Length = 318
Score = 337 bits (863), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/317 (54%), Positives = 235/317 (74%), Gaps = 11/317 (3%)
Query: 13 VSGFYTFLTRGIEDLDRAFVSSTNNFTMSIQFLQRALSILRSFHTHLTLLVQKLHLPVGD 72
V+GFY FLT+G+ +L ++F+S ++F MSIQF+ S L+SFH+ LT+LVQ+L L VG
Sbjct: 11 VNGFYNFLTQGLNELHQSFLS--HDF-MSIQFISEVFSSLQSFHSQLTILVQRLCLSVGG 67
Query: 73 KWLDEYMDETSKLWETCHVLKSGVSGIEGYYSAGLNITSSFDSHPHLTPQLWRQVLRAIS 132
KWL+EYMDE+S+LW+ CHVLKS +SGIE Y S G NI SS D + +LTP+L QV+RAI+
Sbjct: 68 KWLNEYMDESSRLWDICHVLKSAISGIENYSSTGSNIASSVDGYHNLTPELSHQVIRAIN 127
Query: 133 ACRREAVGLEEENRSLMETRIHTLPLHFDERVSMESKLNGFNGFRGVLYAMRNISSMLLT 192
C+RE++GL EEN+SLMETR L ++ + MESKLN FNGFRGVL AMR++SS+LL
Sbjct: 128 ICQRESLGLVEENKSLMETRTQALSQCLNQNMCMESKLNEFNGFRGVLCAMRSVSSLLLM 187
Query: 193 ILLQGLVYRCPDTPDMVLGGYEGGRLFLGSGLMVSAARLQQKVAAEI--GGAQPGMLLYE 250
ILL G+ Y C + GYEG +F GSG +VS ARLQQKVA EI Q G+LL E
Sbjct: 188 ILLCGVAY-CWSSSCFDQQGYEGHMVF-GSGFVVSMARLQQKVAQEIDQNNGQQGILLLE 245
Query: 251 FRRSRVAVEELRGELERWGSQHVEWEMEVGLRERVENLRMCFGVLKSGAESVVCQLDDFF 310
F+++++++EEL+ ELER V ++ + ++ +V+NL+ CFG+L+ G E++ QLDDFF
Sbjct: 246 FQQAKISMEELKVELERM----VGYDAQHEIQAKVDNLKRCFGLLRCGVETITGQLDDFF 301
Query: 311 DEIVEGRKKLLDFCSHR 327
DEIVEGRKKLL+ CSH+
Sbjct: 302 DEIVEGRKKLLNMCSHK 318
>Glyma08g20040.1
Length = 322
Score = 335 bits (860), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 242/324 (74%), Gaps = 9/324 (2%)
Query: 9 NTNSVSGFYTFLTRGIEDLDRAFVSSTNNFTMSIQFLQRALSILRSFHTHLTLLVQKLHL 68
+ +SVSGFY LT+G+ +L ++F+S ++ MS QFL + +S L+SFH+ LT+LV+KL L
Sbjct: 3 SNSSVSGFYNLLTQGLNELHQSFLSHSS--FMSFQFLSQVISSLQSFHSQLTILVRKLWL 60
Query: 69 PVGDKWLDEYMDETSKLWETCHVLKSGVSGIEGYYSAGLNITSSFDSHPHLTPQLWRQVL 128
PVG KWLDEYMDE+S+LW+ CHVLKS +SG+E YY A NI SS D++ + TPQL RQV+
Sbjct: 61 PVGGKWLDEYMDESSRLWDACHVLKSAISGMENYYLAASNIASSLDAYHYFTPQLSRQVI 120
Query: 129 RAISACRREAVGLEEENRSLMETRIHTLPLHFDERVSMESKLNGFNGFRGVLYAMRNISS 188
RAI+ C+RE +GLEEENRSLMETRI L + +SMESKLNGF+GFRGVLYAMR++SS
Sbjct: 121 RAINVCQREILGLEEENRSLMETRIEPLSQCLIQNISMESKLNGFSGFRGVLYAMRSVSS 180
Query: 189 MLLTILLQGLVYRCPDTPDMVLGGYEGGRLFLGSGLMVSAARLQQKVAAEIG----GAQP 244
+LL ILL GL Y C + GY+G +F +G MVS A LQQKVA EI G QP
Sbjct: 181 LLLMILLSGLAY-CW-SSSCFHQGYDGHMVFGSTGFMVSMAILQQKVAEEIDQNIEGGQP 238
Query: 245 GMLLYEFRRSRVAVEELRGELERWG-SQHVEWEMEVGLRERVENLRMCFGVLKSGAESVV 303
G+LL+EF++++ A+EEL+ ELER S + E + ++E++ N++ CFG+L+ G E++
Sbjct: 239 GILLFEFQKAKNAMEELKLELERIAISCYEEGHADHEIQEKIHNVKSCFGLLRCGVETIT 298
Query: 304 CQLDDFFDEIVEGRKKLLDFCSHR 327
QLDDFFDEIVEGRKKLLD CSHR
Sbjct: 299 GQLDDFFDEIVEGRKKLLDMCSHR 322
>Glyma04g43370.1
Length = 141
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/141 (73%), Positives = 116/141 (82%), Gaps = 7/141 (4%)
Query: 193 ILLQGLVYRCPDTPDMVLGG--YEGGRLFLGSGLMVSAARLQQKVAAEIG--GAQPGMLL 248
+LL GLVY D+ D VLGG YEG LFLGS M+S ARLQQ+VAAEIG G PGMLL
Sbjct: 2 VLLYGLVYCYGDSSDFVLGGCGYEGC-LFLGSAFMMSTARLQQRVAAEIGHMGGSPGMLL 60
Query: 249 YEFRRSRVAVEELRGELERWGS--QHVEWEMEVGLRERVENLRMCFGVLKSGAESVVCQL 306
+EFRRS+VA+EELRGELER GS Q VEWE EV +RERVENLR CFGVL+SGA+++V QL
Sbjct: 61 HEFRRSKVAMEELRGELERRGSGSQGVEWESEVAIRERVENLRTCFGVLRSGADNIVAQL 120
Query: 307 DDFFDEIVEGRKKLLDFCSHR 327
DDFFDEIVEGRK+LLDFCSHR
Sbjct: 121 DDFFDEIVEGRKRLLDFCSHR 141
>Glyma01g05280.1
Length = 258
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 128/246 (52%), Gaps = 32/246 (13%)
Query: 89 CHVLKSGVSGIEGYYSAGLNITSSFDSHPHLTPQLWRQVLRAISACRREAVGLE-EENRS 147
CHVLKS + GIE Y S G NI SS D + +LTP+L Q C VG + + S
Sbjct: 38 CHVLKSAIYGIENYSSTGSNIASSIDGYHNLTPELSHQ-----HTC---IVGYKGHKYLS 89
Query: 148 LMETRI----HTLPLHFDERVSMESKLNGFNGFRGVLYAMRNISSMLLTILLQGLVYRCP 203
E+RI L + + + SK G + ++ + +L L Y
Sbjct: 90 KGESRIGRGKQKLDGNKNACIETMSKPKHVYGIK-----VKQVQWLLRCSLCNEECYLIA 144
Query: 204 DTPDMVLGGYEGGRLFLGSGLMVSAARLQQKVAAEIG--GAQPGMLLYEFRRSRVAVEEL 261
+ G L LM+ QKVA EIG Q G+LL EF+++++A+EEL
Sbjct: 145 SNDFAIWG------CILLVFLMLWPT--TQKVAQEIGQNNGQRGILLLEFQQAKIAMEEL 196
Query: 262 RGELERWGSQHVEWEMEVGLRERVENLRMCFGVLKSGAESVVCQLDDFFDEIVEGRKKLL 321
+ ELER ++E++ +V+NL+ CFG+L+ G E++ QLDDFFDEIVEGRK LL
Sbjct: 197 KVELERMVGYDAQYEIQA----KVDNLKHCFGLLRCGVETITRQLDDFFDEIVEGRKMLL 252
Query: 322 DFCSHR 327
+ CSH+
Sbjct: 253 NMCSHK 258
>Glyma15g35090.1
Length = 48
Score = 81.3 bits (199), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 39/48 (81%)
Query: 65 KLHLPVGDKWLDEYMDETSKLWETCHVLKSGVSGIEGYYSAGLNITSS 112
KLHLPVGDKWL+EYMDE+SKLW+ C V+K G+ GI YYS L ITSS
Sbjct: 1 KLHLPVGDKWLNEYMDESSKLWDVCQVIKFGIFGINTYYSVALKITSS 48
>Glyma05g30220.1
Length = 137
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 13/105 (12%)
Query: 16 FYTFLTRGIEDLDRAFVSSTNNFTMSIQFLQRALSILRSFHTHLTLLVQKLHLPVGDKWL 75
FY FLT+G+ +L ++F+S ++F MSIQF+ S L+SFH+ LT+LVQ+L L +
Sbjct: 14 FYNFLTQGLNELHQSFLS--HDF-MSIQFISDVFSSLQSFHSQLTILVQRLCLSLKALGY 70
Query: 76 DEYMDETSKLWETCHVLKSGVSGIEGYYSAGLNITSSFDSHPHLT 120
M +S +SG+E Y S G NI SS D + HLT
Sbjct: 71 LPCMYSN----------RSAISGMENYSSTGSNIASSVDDYHHLT 105
>Glyma09g10000.1
Length = 46
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 32/37 (86%)
Query: 40 MSIQFLQRALSILRSFHTHLTLLVQKLHLPVGDKWLD 76
MSIQFLQR L +LRSFHT LT LVQKLHL VG+KWL+
Sbjct: 9 MSIQFLQRTLFLLRSFHTQLTFLVQKLHLLVGEKWLN 45