Miyakogusa Predicted Gene

Lj0g3v0285129.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0285129.1 tr|A9SEV9|A9SEV9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_233109,38.14,0.00000000000003,seg,NULL,CUFF.19022.1
         (649 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g38870.1                                                       630   e-180
Glyma18g20850.1                                                       602   e-172

>Glyma08g38870.1 
          Length = 897

 Score =  630 bits (1625), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 365/654 (55%), Positives = 427/654 (65%), Gaps = 76/654 (11%)

Query: 1   MHAPPFAPRSHSVDS-INLADQPLEFAPKFSRDSELQMQSTYNHHDSSGSMNNWGAPVAP 59
           MHAPPFA   HSVDS I+LADQPL+FAP                   S SMNNW +PVAP
Sbjct: 245 MHAPPFASGCHSVDSAISLADQPLDFAP-------------------SSSMNNWVSPVAP 285

Query: 60  GIGYPSITPILPSGPQ-HDPSVTNPGHV--PYGRXX---XXXXXXXXXXXXXXXXGTAIH 113
           G+GYP I PIL SG Q HDPS+T PGHV  P+GR                     GT IH
Sbjct: 286 GVGYPPIPPILSSGQQQHDPSITTPGHVAPPFGRFPGPGLPSTIQPTGAPFTLSTGTTIH 345

Query: 114 HSAAFSADAYGISGVPERPKKASVPNWLRDEIKKTVIAAPSVDHPKEEATFVDDGIDKSY 173
            + AFSAD YG+SG+P+RPKKASVPNWL+DEIKK VI AP+ +   +E TFV+DGIDKSY
Sbjct: 346 PTVAFSADVYGVSGIPDRPKKASVPNWLKDEIKKKVIPAPAGN--LKEETFVNDGIDKSY 403

Query: 174 VKGDEADSKSIDSSRSAXXXXXXXXHGEAARTAAINQEIKKVLTEVLLKVTDELFDEIAT 233
            +GDEADSKSIDSSRSA          EAARTAAIN EIK+VLTEVLLKVTDELFDEIAT
Sbjct: 404 ARGDEADSKSIDSSRSAEDEEDEEDQVEAARTAAINLEIKRVLTEVLLKVTDELFDEIAT 463

Query: 234 RVVSEDDQIAEVGHNIXXXXXXXXXXXXXXXXXXXXXXVLVPVKAKEIENGGANEKSNSS 293
           +V++EDD  AEVGH +                      V VP+K K +EN  A+EKSNSS
Sbjct: 464 KVLAEDDFTAEVGHKVATSNHKASASPPSATVPKASAKVFVPIKEK-VENVDASEKSNSS 522

Query: 294 FPGDVLGLGNYGSDADDEDDEIKNSSVPTPAKEAA------------------------- 328
            PGDVLGLGNYGSDADD D+EI++SSVPTPAK+AA                         
Sbjct: 523 SPGDVLGLGNYGSDADDGDNEIESSSVPTPAKDAAYKSGIKKPLSDTHDLSVNGISQLDE 582

Query: 329 ------NMVNNLVKPSSLPSRNSNGAAIDQVHDDKVIEKFDNASKVASKDNRDNELNAIE 382
                 N+VNN VK  SLPSR+SNGAA DQ+HDDKV+          S+D RDN LN IE
Sbjct: 583 HAISETNLVNNQVKTISLPSRSSNGAATDQLHDDKVV----------SEDLRDNGLNFIE 632

Query: 383 SSHARLNGFSSKDTPGMPRSELSGKNVGAEKAVDDHTGRGSRKK----NRLDRNSSEKDF 438
            +H R NGFSSKDT G+PRSEL GKN+  EKA+DDH+GR SRKK    +R DR++SEKDF
Sbjct: 633 RNHDRFNGFSSKDTSGIPRSELPGKNISVEKAMDDHSGRESRKKSEKNDRPDRSTSEKDF 692

Query: 439 IKEEQGGNTRTDEKGNDSRRRKDERHQKKDQTDYGSEAKEKLKEHNIRHGEKAXXXXXXX 498
           +KE     T+ DEKGN+++RRKDER+QK+D+TDYGSEAKE++K+H++RHGEKA       
Sbjct: 693 VKEVHSSKTKIDEKGNENQRRKDERNQKRDKTDYGSEAKERVKQHSLRHGEKAKESDSRK 752

Query: 499 XXXHVDTKDDRKETEKSSRGRNTEDNSRRKDHAKDKEENKSRQKDASNPDRHKXXXXXXX 558
              HVD KDD+KE EKS RG  T+D SR+++HAKDK E+KSRQKDASN DRH+       
Sbjct: 753 RSSHVDVKDDKKEAEKSHRGSATDDTSRKREHAKDKGEHKSRQKDASNNDRHRRRRSSSV 812

Query: 559 XXXXXTTKDHLSNRXXXXXXXXXXXXKRKLHHRKRDLSPSPVRSKRRYYLFRDP 612
                T KD + N             KRKLH RKRDLSPSPVRSKRR  L R P
Sbjct: 813 SSRGRTKKDCI-NHAGDSSGEGSDGSKRKLHSRKRDLSPSPVRSKRR-QLLRSP 864


>Glyma18g20850.1 
          Length = 951

 Score =  602 bits (1552), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 358/656 (54%), Positives = 427/656 (65%), Gaps = 69/656 (10%)

Query: 1   MHAPPFAPRSHSVDS-INLADQPLEFAPKFSRDSELQMQSTYNHHDSSGSMNNWGAPVAP 59
           MHAPPF   SHSVDS I+LADQPL+FAP                   S SMNNW +PV P
Sbjct: 288 MHAPPFVSGSHSVDSTISLADQPLDFAP-------------------SSSMNNWASPVTP 328

Query: 60  GIGYPSITPILPSGPQ-HDPSVTNPGHV--PYGRXX---XXXXXXXXXXXXXXXXGTAIH 113
           G+ YPS+ P L SG Q HDPS+T PGHV  P+GR                     GT +H
Sbjct: 329 GVSYPSVPPNLSSGQQQHDPSITTPGHVAPPFGRFAGPGLPSTIPPSGAPFTLSTGTTLH 388

Query: 114 HSAAFSADAYGISGVPERPKKASVPNWLRDEIKKTVIAAPSVDHPKEEATFVDDGIDKSY 173
            + AFSADAYG SGVP+RPKKASVPNWL++EIKKTVI AP+ ++ KEE TFV+DGIDKSY
Sbjct: 389 PTVAFSADAYGASGVPDRPKKASVPNWLKEEIKKTVIPAPA-ENLKEE-TFVNDGIDKSY 446

Query: 174 VKGDEADSKSIDSSRSAXXXXXXXXHGEAARTAAINQEIKKVLTEVLLKVTDELFDEIAT 233
            +GDEADSKSIDSSRSA          EAART AINQEIK+VLTEVLLKVTDELFDEIAT
Sbjct: 447 ARGDEADSKSIDSSRSAEDEDEED-QVEAARTVAINQEIKRVLTEVLLKVTDELFDEIAT 505

Query: 234 RVVSEDDQIAEVGHNIXXXXXXXXXXXXXXXXXXXXXXVLVPVKAKEIENGGANEKSNSS 293
           RV++EDD  AEVGH +                      VLVP+K K +EN   +E SNSS
Sbjct: 506 RVLAEDDLTAEVGHKVATSNHKASASPPSATVPKASAKVLVPIKEK-VENEDTSENSNSS 564

Query: 294 FPGDVLGLGNYGSDADDEDDEIKNSSVPTPAKEAA------------------------- 328
            PGDVLGLGNYGSDADD D+EI++SSVPTPA++AA                         
Sbjct: 565 SPGDVLGLGNYGSDADDGDNEIESSSVPTPARDAAYQSGIKKPLSDRHDLPVNGIAQLDE 624

Query: 329 ------NMVNNLVKPSSLPSRNSNGAAIDQVHDDKVIEKFDNA--SKVASKDNRDNELNA 380
                 N++NN VK  SLPSR+SN AA D +HDDKV ++ +++  SKV ++D +DN LN+
Sbjct: 625 HDRSETNLMNNQVKTISLPSRSSNDAATDLLHDDKVTKESNHSHSSKVVTEDLKDNGLNS 684

Query: 381 IESSHARLNGFSSKDTPGMPRSELSGKNVGAEKAVDDHTGRGSRKK----NRLDRNSSEK 436
           IE S  R NGFSSKD+ G+ RSEL GKN+  EKA DD +GR SRKK    +R DR++SEK
Sbjct: 685 IERSLDRFNGFSSKDSSGVSRSELPGKNISVEKATDDLSGRESRKKSEKNDRPDRSTSEK 744

Query: 437 DFIKEEQGGNTRTDEKGNDSRRRKDERHQKKDQTDYGSEAKEKLKEHNIRHGEKAXXXXX 496
           DF+KE     TR DEKGN+++ RKDER+QK+++TDYGSEAKE++KEH++RHGEKA     
Sbjct: 745 DFVKEVHSSKTRIDEKGNENQIRKDERNQKREKTDYGSEAKERVKEHSLRHGEKAKESDS 804

Query: 497 XXXXXHVDTKDDRKETEKSSRGRNTEDNSRRKDHAKDKEENKSRQKDASNPDRHKXXXXX 556
                HVD KDD+KE EKS RG  T+D SR+++HAKDK E+KSRQKDASN DRH+     
Sbjct: 805 RKRSSHVDVKDDKKEAEKSHRGSATDDTSRKREHAKDKGEHKSRQKDASNHDRHRRRRSS 864

Query: 557 XXXXXXXTTKDHLSNRXXXXXXXXXXXXKRKLHHRKRDLSPSPVRSKRRYYLFRDP 612
                  T KD + N             KRKLH RK DLSPSPVRSKRR  L R P
Sbjct: 865 SVSSRGRTKKDRI-NHADDSSGEGSDGSKRKLHSRKHDLSPSPVRSKRR-QLLRSP 918