Miyakogusa Predicted Gene

Lj0g3v0284819.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0284819.1 Non Chatacterized Hit- tr|I1K0B7|I1K0B7_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,86.94,0,Cytidine
deaminase-like,Cytidine deaminase-like; CYT_DCMP_DEAMINASES,APOBEC/CMP
deaminase, zinc-bind,CUFF.18991.1
         (222 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g03380.1                                                       374   e-104
Glyma17g13950.1                                                       231   5e-61

>Glyma05g03380.1 
          Length = 218

 Score =  374 bits (961), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/222 (81%), Positives = 187/222 (84%), Gaps = 4/222 (1%)

Query: 1   MNSREXXXXXXXXXXXXXXXXXXXRFFFNRSRRQPSRTNFSQNGTVSTPPDPFDPSRRHG 60
           MNSRE                   RFF+    R  +    S NGTV +P DPFDPS+R G
Sbjct: 1   MNSREATLAATATVIGALASAIGFRFFY----RSQTHAKSSLNGTVFSPRDPFDPSKRKG 56

Query: 61  YLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKLPWAKKS 120
           YLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDG+ILGIGYNGFPRGCSDDKLPWAKKS
Sbjct: 57  YLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGVILGIGYNGFPRGCSDDKLPWAKKS 116

Query: 121 RTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFV 180
           RTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFV
Sbjct: 117 RTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFV 176

Query: 181 EKRLDNPDIAYIASHKLLSLAGVKVRKHQPLMNEIHLKFDEH 222
           EKRL+N D AYIASHKLLSLAGVKVRKHQPLMNEIHLKF+EH
Sbjct: 177 EKRLENSDTAYIASHKLLSLAGVKVRKHQPLMNEIHLKFEEH 218


>Glyma17g13950.1 
          Length = 150

 Score =  231 bits (589), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 112/124 (90%), Positives = 116/124 (93%), Gaps = 3/124 (2%)

Query: 61  YLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKLPWAKKS 120
           Y+SWDDYFMAIAFLSAERSKD   QVGACLVSQDG+ILGIGYNGFPRGCSDDKLPWA+KS
Sbjct: 1   YISWDDYFMAIAFLSAERSKD---QVGACLVSQDGVILGIGYNGFPRGCSDDKLPWAQKS 57

Query: 121 RTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFV 180
           RTGNPL+TKYP     EVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFV
Sbjct: 58  RTGNPLKTKYPCNLVDEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFV 117

Query: 181 EKRL 184
           EKRL
Sbjct: 118 EKRL 121