Miyakogusa Predicted Gene

Lj0g3v0284689.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0284689.1 Non Chatacterized Hit- tr|Q84N00|Q84N00_MEDTR
Putative class 5 chitinase OS=Medicago truncatula GN=c,33.68,1e-18,no
description,Glycoside hydrolase, catalytic domain; no
description,Chitinase II; (Trans)glycosidas,CUFF.18975.1
         (208 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g25020.1                                                       177   7e-45
Glyma17g08400.1                                                       172   3e-43
Glyma15g25060.1                                                       141   4e-34
Glyma17g33190.1                                                       124   5e-29
Glyma17g11170.1                                                       106   2e-23
Glyma13g22350.1                                                       101   7e-22

>Glyma15g25020.1 
          Length = 331

 Score =  177 bits (449), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 90/183 (49%), Positives = 125/183 (68%), Gaps = 3/183 (1%)

Query: 27  VKAGYYYSGSEISASDIKATLFTHLLCSFAFINPTTYNVFINSSEEHKFSTFTNTVKLQN 86
           ++AGY+YSGS    SDI + L+THL+C+FA +N +TY ++++  +E  FS+FT TVK +N
Sbjct: 1   LQAGYWYSGSGFPVSDINSALYTHLICAFAELNSSTYELYVSPEDEQSFSSFTTTVKQKN 60

Query: 87  PSVSTLLSIWGGGENTAIFTSMLNQSSFRKSFIDSSIRTARGLEFRGIDLCGAW-PKQGS 145
           PS++TLLSI GG  N  + + M+++ S RK FI SSIR AR   F+G+DL  +W P+  S
Sbjct: 61  PSITTLLSIAGGNGNDTVLSLMVSKDSSRKYFIQSSIRIARLYGFQGLDL--SWVPETIS 118

Query: 146 DLINFGTLLKEWRIAIASEARNSSKPELVLVMAGYYLKGSESMSYPFESMQVNLDWVHFL 205
           D+ N G L +EWR A  SEA N S   L+L  A ++  G +S SYP ES+Q NL+WVH L
Sbjct: 119 DMNNMGRLFEEWRAAAKSEAANDSTQVLILTAAVHFRPGLDSASYPVESIQNNLNWVHIL 178

Query: 206 AYD 208
            YD
Sbjct: 179 TYD 181


>Glyma17g08400.1 
          Length = 372

 Score =  172 bits (435), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 85/182 (46%), Positives = 124/182 (68%)

Query: 27  VKAGYYYSGSEISASDIKATLFTHLLCSFAFINPTTYNVFINSSEEHKFSTFTNTVKLQN 86
           +K GY++ GS  + SDI +TL+THL C+FA +N +TY V I+SS   +FSTFT TV+ +N
Sbjct: 29  IKGGYWFPGSSFAVSDINSTLYTHLFCAFADLNASTYQVTISSSNAPQFSTFTQTVQKKN 88

Query: 87  PSVSTLLSIWGGGENTAIFTSMLNQSSFRKSFIDSSIRTARGLEFRGIDLCGAWPKQGSD 146
           PSV TLLSI GG  N + F++M +Q+  RK+FIDSSI+ AR   F G+D+   +P   +D
Sbjct: 89  PSVKTLLSIGGGASNPSTFSAMASQAGRRKTFIDSSIQLARSNNFHGLDMDWEYPSTSTD 148

Query: 147 LINFGTLLKEWRIAIASEARNSSKPELVLVMAGYYLKGSESMSYPFESMQVNLDWVHFLA 206
           + N+G L++EWR A+ +EARNS K  L+LV A +Y     S++Y  + +    D+V+ +A
Sbjct: 149 MTNYGFLIREWRTALVNEARNSGKQILLLVGAVFYSSNYYSLNYTIQDVINAFDFVNVMA 208

Query: 207 YD 208
           YD
Sbjct: 209 YD 210


>Glyma15g25060.1 
          Length = 365

 Score =  141 bits (356), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 9/188 (4%)

Query: 27  VKAGYYYSGSEISASDIKATLFTHLLCSFAFINPTTYNVFINSSEEHKFSTFTNTVKLQN 86
           +K GY+YS S ++ S+I  + FTHL C+FA ++P T  V I+SS+  +FSTFT T++ +N
Sbjct: 29  IKGGYWYSESGLAVSNINPSHFTHLFCAFAHLDPNTNKVTISSSDSSQFSTFTQTLQAKN 88

Query: 87  PSVSTLLSIWGG-GENTAI-FTSMLNQSSFRKSFIDSSIRTARGLEFRGIDLCGAWPKQG 144
           PSV TLLSI GG G + A  F+ M  Q++ RKSFIDSSI+ AR   F G+DL   +P   
Sbjct: 89  PSVKTLLSIGGGFGPSLAANFSRMARQANTRKSFIDSSIQQARSNNFLGLDLDWEYPSSD 148

Query: 145 SDLINFGTLLKEWRIAIASEARNSSKPELVLVMAGYYLKGSESMS----YPFESMQVNLD 200
           +D  NF +L+KEW+ A+  E+R S K  L L  A   + GS+ ++    YP + +  NLD
Sbjct: 149 TDKTNFASLIKEWKEAVTKESRTSGKAPLFLSAA---VAGSDQITPLKYYPGKDVANNLD 205

Query: 201 WVHFLAYD 208
           +V+ +AYD
Sbjct: 206 FVNVMAYD 213


>Glyma17g33190.1 
          Length = 384

 Score =  124 bits (312), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 109/205 (53%), Gaps = 13/205 (6%)

Query: 17  SQSSADTPSW--------VKAGYYYSGSEISASDIKATLFTHLLCSFAFINPTTYNVFIN 68
           SQ+S ++ +W        V+A Y+ +G ++S S I    FTH+  +F   +P  +++ + 
Sbjct: 23  SQASVESSNWKYAPNIGSVRAAYWPAGDDLSPSSIDTKYFTHIYYAFIQQDPQLFHLSVT 82

Query: 69  SSEEHKFSTFTNTVKLQNPSVSTLLSIWGGGENTAIFTSMLNQSSFRKSFIDSSIRTARG 128
             +E     F N ++ + P V TLLSI GGG N+  F+ M +    R+ FI+S+I  AR 
Sbjct: 83  EFDEKWIPKFINGLRYRYPPVKTLLSIGGGGSNSTAFSLMASNKHTRQVFINSTIHVARQ 142

Query: 129 LEFRGIDLCGAWPKQGSDLINFGTLLKEWRIAIASEARNSSKPELVLVMAGYY-----LK 183
             F G+DL   +P    D+ N G L +EW  A+  EA+ S KP L+L  A YY     L 
Sbjct: 143 YGFNGLDLDWEFPDDEHDMSNLGVLFQEWHQALVVEAKISRKPRLLLTAAVYYASTIKLI 202

Query: 184 GSESMSYPFESMQVNLDWVHFLAYD 208
           G    SYP ++++  LDW   + +D
Sbjct: 203 GDGPRSYPAQAIRNYLDWASPMCFD 227


>Glyma17g11170.1 
          Length = 377

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 8/187 (4%)

Query: 27  VKAGYYYSGSEISASDIKATLFTHLLCSFAFINPTTYNVFINSSEEHKFSTFTNTVKLQN 86
           VKA Y+        S I  +LFTH+  +F   N  TY + +++S     + FT T+    
Sbjct: 27  VKAIYWLEQPLFPPSAINTSLFTHVYYAFLAPNNVTYKLHVSNSTATNLAKFTTTL---G 83

Query: 87  PSVSTLLSIWGGGENTAIFTSMLNQSSFRKSFIDSSIRTARGLEFRGIDLCGAWPKQGSD 146
            +V+TL+SI G   N  +F+ +   S+ R +FI+S+I  AR   F G+DL   +P+  S+
Sbjct: 84  STVATLISIGGANSNATLFSLIAANSAARATFINSTITLARTFGFHGVDLDWEFPRTASE 143

Query: 147 LINFGTLLKEWRIAIASEARNSSKPELVLVMA-----GYYLKGSESMSYPFESMQVNLDW 201
           + N G L K+WR AIA+EA  + +  L+L  A      Y+L  + S+ YP  S+  NLDW
Sbjct: 144 MKNLGLLFKKWRAAIAAEAAATGREPLLLTAAVYFSVDYFLSETSSLRYPVGSINENLDW 203

Query: 202 VHFLAYD 208
           V+ ++YD
Sbjct: 204 VNVMSYD 210


>Glyma13g22350.1 
          Length = 379

 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 109/188 (57%), Gaps = 9/188 (4%)

Query: 27  VKAGYYYSGSEISASDIKATLFTHLLCSFAFINPTTYNV-FINSSEEHKFSTFTNTVKLQ 85
           +KA Y+        S I  +LFTH+  +F   N  TY +  +++S     +TFTNT++  
Sbjct: 28  IKAIYWLEQPLFPPSAINTSLFTHVYYAFLAPNNVTYELDVVSNSTGTNLATFTNTLR-- 85

Query: 86  NPSVSTLLSIWGGGENTAIFTSMLNQSSFRKSFIDSSIRTARGLEFRGIDLCGAWPKQGS 145
             +V+TL+SI G   N+ +F+ +   ++ R +FI+S+I  AR   F GIDL   +P+  +
Sbjct: 86  -SNVATLISIGGANSNSTLFSLIAANAAARATFINSTITVARTFGFNGIDLDWEFPRTVN 144

Query: 146 DLINFGTLLKEWRIAIASEARNSSKPELVLVMA-----GYYLKGSESMSYPFESMQVNLD 200
           ++ + G L KEWR A+++EA  + +  L+L  A      Y+L  + S+ YP +S+  NLD
Sbjct: 145 EMNDLGLLFKEWRAAVSAEAAATGREPLLLTAAVYFSVDYFLSETTSLRYPVDSINENLD 204

Query: 201 WVHFLAYD 208
           WV+ ++YD
Sbjct: 205 WVNVMSYD 212