Miyakogusa Predicted Gene

Lj0g3v0284289.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0284289.1 Non Chatacterized Hit- tr|I1MAP1|I1MAP1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,42.93,1e-18,seg,NULL,CUFF.18946.1
         (156 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g33810.1                                                        97   5e-21
Glyma13g02310.1                                                        82   3e-16
Glyma12g21200.1                                                        67   9e-12

>Glyma14g33810.1 
          Length = 271

 Score = 97.4 bits (241), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 106/198 (53%), Gaps = 43/198 (21%)

Query: 1   MNLDELLRNVISA-ESGLVVQNPLPPPD-SFLLGNNTDSNGAS-SHKTSN----EVWRDI 53
           MNLDEL +NVISA +SG ++Q+P    + SF+LG+N   N  + S+KT+N    E WR  
Sbjct: 33  MNLDELHKNVISADQSGQLLQDPSSDHNNSFILGSNGSLNNDTLSNKTNNDSISESWRKF 92

Query: 54  VHSEQVYRSVNNNL-QQSILGQTNLESFLARA---------------------------- 84
           V  EQV RS++  L QQ  LG+ NLE+FLARA                            
Sbjct: 93  VLEEQVSRSMDTPLKQQPSLGE-NLENFLARAGVINVGDHQDHNVNVVIGGDTHHQALMG 151

Query: 85  MDPMVMGSQPQEWLPLQVP-GINFXXXXXXXXXXXIRRL--CPDFSVYKPV-YENQVLDI 140
           MDPMVM SQ + WL +Q+P  IN                  C DFSV K + YENQV++I
Sbjct: 152 MDPMVMHSQQEHWLQMQIPAAINIHQHQEQQHHHQQMNFGGCQDFSVPKSLFYENQVMEI 211

Query: 141 GYSENS--MATMPSTCSD 156
           GYSENS  +++M    SD
Sbjct: 212 GYSENSAGISSMSPAYSD 229


>Glyma13g02310.1 
          Length = 279

 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 95/182 (52%), Gaps = 38/182 (20%)

Query: 1   MNLD-ELLRNVISA-ESGLVVQNPLPPPDSFLLGNNTDSN-GASSHKTSNEV---WRDIV 54
           MNLD EL +NVIS  +SG +VQ+ L   +SF+L +  ++N G  S+KT+N +   W++IV
Sbjct: 19  MNLDDELQKNVISTDQSGQLVQDLLSDHNSFILPSLKNNNIGTLSNKTNNNINRPWKEIV 78

Query: 55  HSEQVYRSVNNNLQQSILGQTNLESFLARA-----------------------------M 85
           H E V RS++  L+Q  LG+T LESFL RA                             M
Sbjct: 79  HQEHVNRSMDTPLKQPSLGET-LESFLVRAGVIDVGDHQDDNNDNVVVGGNTHHQALMGM 137

Query: 86  DPMVMGSQPQEWLPLQVP-GINFXXXXXXXXXXXIRRLCPDFSVYKPV-YENQVLDIGYS 143
           DP+VM SQ + WL L++P  I+                  D  V K + YENQ ++IGYS
Sbjct: 138 DPVVMLSQKEHWLQLKIPIAIDMHQHQEQHHQQRDVGEHQDLIVPKSLFYENQEMEIGYS 197

Query: 144 EN 145
           EN
Sbjct: 198 EN 199


>Glyma12g21200.1 
          Length = 196

 Score = 66.6 bits (161), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 78/158 (49%), Gaps = 39/158 (24%)

Query: 27  DSFLLGNNTD-SNGASSHKTSN----EVWRDIVHSEQVYRSVNNNL-QQSILGQTNLESF 80
           +SF++G+N   +NG   +KT+N    E WR  V  EQV RS++  L QQ  LG+ NLE+F
Sbjct: 34  NSFIIGSNGSLNNGTLRNKTNNDSISESWRKFVLEEQVSRSMDTPLKQQRSLGE-NLENF 92

Query: 81  LA----------------------------RAMDPMVMGSQPQEWLPLQVP-GINFXXXX 111
           +A                              MDP+VM SQ + WL +++P  IN     
Sbjct: 93  VAPTGVINVGDHQDHNANVVIGGDTHHQDLMGMDPIVMPSQQEHWLQMKIPAAINIHQHQ 152

Query: 112 XXXXXXXIRRL--CPDFSVYKPV-YENQVLDIGYSENS 146
                        C DFSV K + +ENQV++IGYSENS
Sbjct: 153 EQQHHHQQMNFGRCQDFSVPKSLFFENQVMEIGYSENS 190