Miyakogusa Predicted Gene

Lj0g3v0281789.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0281789.2 Non Chatacterized Hit- tr|G7I7W3|G7I7W3_MEDTR
ATP-dependent helicase, putative OS=Medicago truncatul,39.57,4e-18,
,CUFF.18743.2
         (414 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g12420.1                                                        70   5e-12

>Glyma13g12420.1 
          Length = 681

 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 60/127 (47%), Gaps = 24/127 (18%)

Query: 257 LDFGDATYTCGYCN-----------------SIMWYEERSE------KRDFANHNEGSNF 293
            D G+    C YCN                 S M  +  S        RD    ++ +N 
Sbjct: 156 FDIGEQLIQCRYCNAQMCQYSGIQIHIVSALSHMLDQHNSHAKSFRMARDRLAADQANNI 215

Query: 294 YLRLFRRRNKDPRVYNLLTSDEVAGLIVGDIENLEAGRDIIVKKQSGELVRIPEYHVSFL 353
            L+L   R KD RVYN+    E+A LIVGD     + RDIIV+ Q+GEL RI E H S+L
Sbjct: 216 KLQLIAARGKDGRVYNMPNVPEIAALIVGDFHP-GSKRDIIVETQNGELQRIHELHPSYL 274

Query: 354 PLQDEIP 360
           PLQ  +P
Sbjct: 275 PLQYPLP 281