Miyakogusa Predicted Gene

Lj0g3v0280759.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0280759.1 Non Chatacterized Hit- tr|D8QYZ8|D8QYZ8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,61.33,1e-18,Cmc1,Cytochrome c oxidase biogenesis protein
Cmc1-like,CUFF.18668.1
         (181 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g06190.1                                                       167   4e-42

>Glyma19g06190.1 
          Length = 95

 Score =  167 bits (424), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 81/93 (87%), Positives = 86/93 (92%), Gaps = 1/93 (1%)

Query: 89  MGYIQDARENHVKKKEEEALRSKMKQKALKQCDRYTAKYAECASGRTLSVVWQCRQQAKE 148
           MGYIQDAR+NHVKKK EEALRSKMKQKALK+CD YTAKYAECA GRTLSVVW+CRQQA+E
Sbjct: 1   MGYIQDARQNHVKKKVEEALRSKMKQKALKECDHYTAKYAECALGRTLSVVWRCRQQAQE 60

Query: 149 LNECLHHFTNDSVLEEMKKAYMLKQGGEGSARI 181
           LN+CLH FTNDSVLEEMKK YMLKQ GEGS RI
Sbjct: 61  LNDCLHQFTNDSVLEEMKKEYMLKQ-GEGSTRI 92