Miyakogusa Predicted Gene

Lj0g3v0280569.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0280569.2 Non Chatacterized Hit- tr|C5WUG2|C5WUG2_SORBI
Putative uncharacterized protein Sb01g030700
OS=Sorghu,50.54,5e-19,DUF3464,Protein of unknown function DUF3464;
seg,NULL,CUFF.18732.2
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g29640.1                                                       166   1e-41
Glyma01g35170.1                                                        63   2e-10
Glyma09g34590.1                                                        62   2e-10

>Glyma16g29640.1 
          Length = 183

 Score =  166 bits (420), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 91/183 (49%), Positives = 122/183 (66%), Gaps = 6/183 (3%)

Query: 1   MKSLVCASHPTLYLPNYSSWKPKFRAFHPITAEKQPNYYPLTTPKPPRANAKGFSNR-PS 59
           MK+L+CA +    L   S WKP F+A+H     K    YP TT KP RA+AKGFS+  P 
Sbjct: 1   MKTLICAPNAAFNLSKLSPWKPNFQAYHHHPTHKL--NYPFTTLKP-RASAKGFSSTGPP 57

Query: 60  TTETDIVPSKNR--RRGVNEEEDEELPRVVLYRIIGRILFSXXXXXXXXXXXXXXXXXXK 117
           T  +D   +  +  RR  N+++D+ELP+ V+YR+IGRILFS                  K
Sbjct: 58  TVASDNANTTKKPMRRKNNDDDDDELPQEVMYRLIGRILFSVGVPMGLGLALLGLFGELK 117

Query: 118 DRGIWDAPLWIPFTTTLLTFGASTLGIAYGTLSASLDAEREGTFLGLNEVQRNWVEMWEE 177
           ++ +WDAPLW+PF TTLLTFGAS+LGIAYG LS SLDAE+EG+FLG+ ++Q+NWVEMW+E
Sbjct: 118 EKHVWDAPLWLPFLTTLLTFGASSLGIAYGALSTSLDAEKEGSFLGVEQLQKNWVEMWQE 177

Query: 178 EDK 180
           + +
Sbjct: 178 KQE 180


>Glyma01g35170.1 
          Length = 208

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 35/55 (63%)

Query: 123 DAPLWIPFTTTLLTFGASTLGIAYGTLSASLDAEREGTFLGLNEVQRNWVEMWEE 177
           D P W+PF  +   FG++ LG++YG +S+S D  REG+F G  E Q+NW   W+ 
Sbjct: 145 DVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSFWGWTEAQKNWPVFWQS 199


>Glyma09g34590.1 
          Length = 287

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 35/55 (63%)

Query: 123 DAPLWIPFTTTLLTFGASTLGIAYGTLSASLDAEREGTFLGLNEVQRNWVEMWEE 177
           D P W+PF  +   FG++ LG++YG +S+S D  REG+F G  E Q+NW   W+ 
Sbjct: 223 DVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSFWGWTEAQKNWPVFWQS 277