Miyakogusa Predicted Gene

Lj0g3v0280139.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0280139.2 tr|G7JV28|G7JV28_MEDTR HVA22-like protein a
OS=Medicago truncatula GN=MTR_4g093270 PE=4
SV=1,40.45,0.000000000000002, ,CUFF.18642.2
         (258 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g07120.1                                                       178   4e-45

>Glyma08g07120.1 
          Length = 386

 Score =  178 bits (452), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/255 (44%), Positives = 139/255 (54%), Gaps = 60/255 (23%)

Query: 1   MKPQTAICRLSNSRKIFVKKVNFLLQAEKYIRENGTEALEKLFASKEEKYIKESGTEALE 60
           + PQ  ICRL+N RK FVKK +FLL  E+Y+ ENG                    TEALE
Sbjct: 106 LNPQAIICRLNNWRKFFVKKDDFLLHVERYLNENG--------------------TEALE 145

Query: 61  KLIVSKNT------TDKPDAETKNAIRDTSNKEMQQTNGKILQTE-----DKKIIQKKEI 109
           KLI SKNT      T KPDAE  NAI  T N E QQTN   LQT+     D ++I+KKEI
Sbjct: 146 KLIASKNTNLLKNTTYKPDAEATNAIIATDNNETQQTNETKLQTQQKTIKDLEVIEKKEI 205

Query: 110 PAGKQDIPYIPIPAPSENASSTMLETKGVAGKEKLGEEFPQSSTHKEVQKEWTC------ 163
            AGKQDI  +P   PS+NAS  M+ETK + GK+    E P+SSTHKEVQKEWTC      
Sbjct: 206 LAGKQDISVVPNLVPSQNASPAMVETKILVGKDTASGELPESSTHKEVQKEWTCALCHVT 265

Query: 164 -----------------TAYEAQKAKTQPVPQKLRISLPKEEWKPKNITNQLSYKTKTGE 206
                               E+ KA+ QPVP K++    K++ K KN+  Q++ KTK+GE
Sbjct: 266 TSSEKTLIDHLHGRKHKATCESLKAQNQPVPHKVKSDQSKDDLKQKNVIYQINSKTKSGE 325

Query: 207 IIVNIGLKGDVVMDH 221
            +      G   MDH
Sbjct: 326 KV------GKEAMDH 334