Miyakogusa Predicted Gene

Lj0g3v0278469.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0278469.1 Non Chatacterized Hit- tr|I1LPC8|I1LPC8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,75.61,1e-17,coiled-coil,NULL,CUFF.18512.1
         (82 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g02400.1                                                        94   4e-20
Glyma11g10050.1                                                        72   1e-13

>Glyma12g02400.1 
          Length = 90

 Score = 94.0 bits (232), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 64/82 (78%)

Query: 1  MEGGSSNSTNLGPKTSELEALQKESEEKHFKIQELKRQIELTKQNLEKKKKEVTEEQRAS 60
          MEGG SNST  G   SELEALQ+E EEK+ KIQELKRQIELTK  LEKKKKEVTEEQ   
Sbjct: 4  MEGGISNSTATGTTESELEALQREHEEKNLKIQELKRQIELTKNRLEKKKKEVTEEQMGG 63

Query: 61 FKALSEKYNSLREEYNAMQAAK 82
          F  LS KYNSLREEYNAM A K
Sbjct: 64 FNTLSNKYNSLREEYNAMLAEK 85


>Glyma11g10050.1 
          Length = 73

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/74 (71%), Positives = 58/74 (78%), Gaps = 1/74 (1%)

Query: 1  MEGGSSNSTNLGPKTSELEALQKESEEKHFKIQELKRQIELTKQNLEKKKKEVTEEQRAS 60
          MEGG SNST  G   SELEALQ+E EEK+ KI+ELKRQIELTK  LEKKKKEVTEEQ   
Sbjct: 1  MEGGISNSTATGTTESELEALQREHEEKNMKIKELKRQIELTKNRLEKKKKEVTEEQMGG 60

Query: 61 FKALSEKYNSLREE 74
          F  +S+KYNSL EE
Sbjct: 61 FN-ISKKYNSLTEE 73