Miyakogusa Predicted Gene
- Lj0g3v0277869.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0277869.1 Non Chatacterized Hit- tr|I1LXA9|I1LXA9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.79,0,EXONUCLEASE
FAMILY PROTEIN,NULL; EXONUCLEASE,NULL; no description,Exonuclease;
RNase_T,Exonuclease, ,CUFF.18460.1
(595 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g09210.1 960 0.0
Glyma14g27300.1 531 e-151
Glyma14g27310.1 220 4e-57
Glyma17g18400.1 131 2e-30
Glyma14g27320.1 120 5e-27
Glyma03g34690.1 114 3e-25
Glyma10g08050.1 98 3e-20
Glyma12g35630.1 78 2e-14
Glyma13g34800.1 77 5e-14
Glyma12g35630.2 64 6e-10
Glyma15g02690.1 57 5e-08
Glyma13g42740.1 55 2e-07
>Glyma13g09210.1
Length = 611
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/629 (76%), Positives = 528/629 (83%), Gaps = 61/629 (9%)
Query: 1 MDSSEANTESPSRAEQD--STANKKCTKFYDIYGPEGKADVVFKSPEDNSTLNLNDIQGL 58
M SSEA E+ AE++ ST+NKKC KFYD+YGPEGKAD+VF SPEDNSTLNL+D+QGL
Sbjct: 10 MGSSEAENEALRGAEEEEGSTSNKKCGKFYDVYGPEGKADIVFNSPEDNSTLNLSDVQGL 69
Query: 59 ITWVLGEGFMPSWVFIKNKPLIPKVMMLYMPGLDAALFLSQSKMLPSLKKFCGKPRPVLA 118
+TWVL EGFMPSWVFIKNKPLIPKV+MLY+PGLDAALFLSQSKMLP LKKFCGKPR +LA
Sbjct: 70 VTWVLSEGFMPSWVFIKNKPLIPKVVMLYVPGLDAALFLSQSKMLPRLKKFCGKPRALLA 129
Query: 119 LRSVEENVFTSNILQNVVPIDLFFLILASCVSDGMQTIDALLTCKVKRKRDENCSIMTKA 178
L SCVSDGMQTIDALLTCK+KRKRDEN SIM K
Sbjct: 130 L---------------------------SCVSDGMQTIDALLTCKMKRKRDENSSIMGKF 162
Query: 179 TLTPQQEDGCVGTNSLSYMELTKDIPFPVTYYTLTEKDLEENGYSINKPGFLSTLPAPLG 238
T QQE+GC T+SLS+ ELTKDIPFPVTYYTLTEK+LEENGYS+NKPGFLSTLPAP G
Sbjct: 163 ARTSQQEEGCCDTDSLSFKELTKDIPFPVTYYTLTEKELEENGYSVNKPGFLSTLPAPSG 222
Query: 239 SPFHEMLAVDCEMCVTSEGFELTRVTLVDVKGQVLIDKLVKPTNAITDYNTRFSGITYEM 298
SPF+EMLA+DCEMC+TSEGFELTR+TLVDVKGQVLIDKLVKP+NAITDYNTRFSGIT EM
Sbjct: 223 SPFYEMLALDCEMCITSEGFELTRITLVDVKGQVLIDKLVKPSNAITDYNTRFSGITSEM 282
Query: 299 LDGVTTSLRDIQEEFLKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSSHK 358
LDGVTTSLRDIQEEF+KLVYKETILVGHSLENDLLAL ISHD VIDTAVLYKHPRGSSHK
Sbjct: 283 LDGVTTSLRDIQEEFIKLVYKETILVGHSLENDLLALNISHDSVIDTAVLYKHPRGSSHK 342
Query: 359 TALRFLAKRFLKREIQQSGNGHDSIEDARATLELALLKIKN------------------- 399
ALRFL KRFL REIQQSGNGHDSIEDARAT+ELALLKI+N
Sbjct: 343 NALRFLTKRFLSREIQQSGNGHDSIEDARATMELALLKIRNGNLSTHAVLVYNLLFIVLS 402
Query: 400 ---------GPDFGSPPNFMRKKLLSILSESGKTSSLIDDISVVKRFASESSHAIPVTSD 450
GPDFGSPP+F RKKLLSILSESGK SSLIDDISVVKR+ASESSHAIPVTSD
Sbjct: 403 FCLIPLYLLGPDFGSPPSFTRKKLLSILSESGKISSLIDDISVVKRYASESSHAIPVTSD 462
Query: 451 EEALAKTTKELKNEKVHFIWTQFSELYSYLKKQAEDSEKLHKRLAEMMALRTCE----KG 506
+ ALAK KE+KNEKVHFIWTQFSEL+SYLKKQAEDSE L+KRLAEM+A++TC+ KG
Sbjct: 463 DVALAKANKEVKNEKVHFIWTQFSELHSYLKKQAEDSESLNKRLAEMIAIKTCQNNFAKG 522
Query: 507 KGFKYNASSELKEILARMDARIRNLYMSLPTNAMVIICTGHGDTAVVRRVRRMLAEDSES 566
KGFK NAS+ELKEILARMDARI NLY+SLPTNAM+IICTGHGDTA+VRR+R+ML E +ES
Sbjct: 523 KGFKLNASAELKEILARMDARIHNLYLSLPTNAMMIICTGHGDTAIVRRLRKMLTEQNES 582
Query: 567 NFSREKIVELLEEFQARAEVALCFVGVKH 595
N RE+IVE+LEE QARAEVALCFVGVKH
Sbjct: 583 NLCREEIVEILEEVQARAEVALCFVGVKH 611
>Glyma14g27300.1
Length = 302
Score = 531 bits (1368), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/302 (85%), Positives = 282/302 (93%), Gaps = 4/302 (1%)
Query: 298 MLDGVTTSLRDIQEEFLKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSSH 357
MLDGVTTSLRDIQEEFLKLV+KETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGS+H
Sbjct: 1 MLDGVTTSLRDIQEEFLKLVHKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSTH 60
Query: 358 KTALRFLAKRFLKREIQQSGNGHDSIEDARATLELALLKIKNGPDFGSPPNFMRKKLLSI 417
K ALRFL KRFL REIQQSGNGHDSIEDARAT+ELALLKI+NGP+FGSPP+F RKKLLSI
Sbjct: 61 KNALRFLTKRFLSREIQQSGNGHDSIEDARATMELALLKIRNGPNFGSPPSFTRKKLLSI 120
Query: 418 LSESGKTSSLIDDISVVKRFASESSHAIPVTSDEEALAKTTKELKNEKVHFIWTQFSELY 477
LSESGKTSSLIDDISVVKR+ASESSHAIPVTSD+ ALAK KE+KN KVHFIWTQFSEL+
Sbjct: 121 LSESGKTSSLIDDISVVKRYASESSHAIPVTSDDVALAKANKEVKNGKVHFIWTQFSELH 180
Query: 478 SYLKKQAEDSEKLHKRLAEMMALRTCE----KGKGFKYNASSELKEILARMDARIRNLYM 533
SYLKKQAEDSE+L++RLAEM+AL+TC+ KGK FK AS+ELKEILARMDARI NLY+
Sbjct: 181 SYLKKQAEDSERLNRRLAEMLALQTCQNNFTKGKDFKLKASAELKEILARMDARIHNLYL 240
Query: 534 SLPTNAMVIICTGHGDTAVVRRVRRMLAEDSESNFSREKIVELLEEFQARAEVALCFVGV 593
SLPTNAM+IICTGHGDTA+VRR+R+MLAE +ESN REKIVE+LEE QARAEVALCFVGV
Sbjct: 241 SLPTNAMMIICTGHGDTAIVRRLRKMLAEQNESNICREKIVEILEEVQARAEVALCFVGV 300
Query: 594 KH 595
KH
Sbjct: 301 KH 302
>Glyma14g27310.1
Length = 155
Score = 220 bits (560), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/188 (63%), Positives = 132/188 (70%), Gaps = 45/188 (23%)
Query: 72 VFIKNKPLIPKVMMLYMPGLDAALFLSQSKMLPSLKKFCGKPRPVLALRSVEENVFTSNI 131
+ +NKPLIPKV+MLY+PGLDAALFLSQSKMLP LK FCGKPR VLAL
Sbjct: 1 LIFQNKPLIPKVVMLYVPGLDAALFLSQSKMLPRLKIFCGKPRAVLAL------------ 48
Query: 132 LQNVVPIDLFFLILASCVSDGMQTIDALLTCKVKRKRDENCSIMTKATLTPQQEDGCVGT 191
SCVSDGMQTIDALLTCK+KRKRDEN SIM K+ LT QQ+
Sbjct: 49 ---------------SCVSDGMQTIDALLTCKMKRKRDENSSIMRKSALTSQQD------ 87
Query: 192 NSLSYMELTKDIPFPVTYYTLTEKDLEENGYSINKPG-----------FLSTLPAPLGSP 240
SLS+ ELTKDIPFPVTYYTLTEK+LEENGYS+NKPG FLSTLPAP GSP
Sbjct: 88 -SLSFKELTKDIPFPVTYYTLTEKELEENGYSVNKPGDFYHATTNYICFLSTLPAPSGSP 146
Query: 241 FHEMLAVD 248
F++MLA+D
Sbjct: 147 FYDMLALD 154
>Glyma17g18400.1
Length = 509
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
Query: 243 EMLAVDCEMCVTSEGFE-LTRVTLVDVKGQVLIDKLVKPTNAITDYNTRFSGITYEMLDG 301
EM+AVDCEM + +G E + +V +VD +V +DKLVKP I DY T +G++ + L+
Sbjct: 141 EMVAVDCEMVLCEDGTEAVVKVCVVDHNLEVKLDKLVKPDKEIADYRTEITGVSSQDLEA 200
Query: 302 VTTSLRDIQEEFLKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSSHKT-A 360
VT SL DIQ+ KL+ ILVGHSL NDL LK+ H VIDT+ +++ GS HK +
Sbjct: 201 VTCSLADIQKYMKKLLSSGIILVGHSLHNDLRVLKLDHVRVIDTSYIFQSLDGSIHKRPS 260
Query: 361 LRFLAKRFLKREIQQSGNGHDSIEDARATLELALLKIKNGPD 402
L L + L E+++ G H+ ++DA+A ++L L KIK+G D
Sbjct: 261 LNSLCQAVLHHEVREKGAPHNCLDDAKAAMDLVLAKIKHGVD 302
>Glyma14g27320.1
Length = 87
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 61/72 (84%)
Query: 4 SEANTESPSRAEQDSTANKKCTKFYDIYGPEGKADVVFKSPEDNSTLNLNDIQGLITWVL 63
+E T + E+DST+ KK KFYDIYGPEGKADVVF SPEDNSTLNL+D+QGL+TWVL
Sbjct: 14 AENKTLRGAEEEEDSTSTKKRGKFYDIYGPEGKADVVFNSPEDNSTLNLSDVQGLVTWVL 73
Query: 64 GEGFMPSWVFIK 75
GEGFMPSWVFIK
Sbjct: 74 GEGFMPSWVFIK 85
>Glyma03g34690.1
Length = 193
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 86/160 (53%), Gaps = 49/160 (30%)
Query: 25 TKFYDIYGPEGKADVVFKSPEDNSTLNLNDIQGLITWVLGEGFMPSWVFIKNKPLIPKVM 84
+++Y YGP N+ + +I W GF NKPLIPK++
Sbjct: 31 SQYYLSYGP----------------CNIVVLLNIICWGRLTGFEC------NKPLIPKLV 68
Query: 85 MLYMPGLDAALFLSQSKMLPSLKKFCGKPRPVLALRSVEENVFTSNILQNVVPIDLFFLI 144
MLY+ GLDAALFLSQ KMLP LK F GKPR +LAL
Sbjct: 69 MLYVSGLDAALFLSQFKMLPRLKIFTGKPRVILAL------------------------- 103
Query: 145 LASCVSDGMQTIDALLTCKVKRKRDENCSIMTKATLTPQQ 184
SCVSDG+Q IDA+LTCK+K KRDEN SIM K+TLT Q+
Sbjct: 104 --SCVSDGLQMIDAVLTCKMKSKRDENSSIMRKSTLTSQK 141
>Glyma10g08050.1
Length = 302
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 100/170 (58%), Gaps = 7/170 (4%)
Query: 243 EMLAVDCEMCVTSEGFE-LTRVTLVDVKGQVLIDKLVKPTNAITDYNTRFSGITYEMLDG 301
EM+ VDCEM + + E + +V +VD + +++LVKP I DY T+ +G++ + L+
Sbjct: 58 EMVVVDCEMVLCEDETEAVVKVCVVDHNFSLCLEELVKPNKEIADYRTKITGVSSQDLEA 117
Query: 302 VTTSLRDIQEEFLKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSSHKT-A 360
VT S+ DIQ+ KL+ ILVGHSL NDLL LK+ H VI+T+ +++ GS HK +
Sbjct: 118 VTCSMADIQKYMNKLLSSGIILVGHSLPNDLL-LKLDHVKVINTSYIFQSLDGSIHKRPS 176
Query: 361 LRFLAKRFLKRE----IQQSGNGHDSIEDARATLELALLKIKNGPDFGSP 406
L L + E ++ + ++DA+A ++L L KIK+G D P
Sbjct: 177 LNSLCQATTPLEESCCLECKFISNCCLDDAKAAMDLVLAKIKHGVDKEFP 226
>Glyma12g35630.1
Length = 265
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 193 SLSYMELTKDIPFPVTYYTLTEKDLEENGYSINKPGFLSTLPAPLGSPFHEMLAVDCEMC 252
S ++ +D P + D E N IN +P S + +A+DCEM
Sbjct: 28 SRTFKTSDEDTPESILGKRKERPDDESNDCQIN-----PLVPVNDDSSLTDAVAMDCEMV 82
Query: 253 VTSEGFE--LTRVTLVDVKGQVLIDKLVKPTNAITDYNTRFSGITYEMLDGVTTSLRDIQ 310
+G + L RVTLV+ G V+ D+ V+P + D+ T+ SGI L Q
Sbjct: 83 GVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTKISGIRPRDLRKA-KDFWAAQ 141
Query: 311 EEFLKLVYKETILVGHSLENDLLALKISHDL--VIDTAVLYKHPRGSSHKTALRFLAKRF 368
++ +L+ ILVGH+L NDL AL +SH + DT+ Y+ SS + ALR LA +
Sbjct: 142 KKVAELINGR-ILVGHALSNDLKALLLSHPRKDIRDTSE-YQPFLKSSSRRALRHLAAKH 199
Query: 369 LKREIQQSGNGHDSIEDARATLEL 392
L IQ H IEDARA + L
Sbjct: 200 LGVNIQTG--EHCPIEDARAAMLL 221
>Glyma13g34800.1
Length = 266
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 193 SLSYMELTKDIPFPVTYYTLTEKDLEENGYSINKPGFLSTLPAPLGSPFHEMLAVDCEMC 252
S ++ +D P + D E N IN P S + +A+DCEM
Sbjct: 28 SRTFKNSDEDTPESILGKRKERPDDEPNDCQIN-----PLAPINDDSSLTDAVAMDCEMV 82
Query: 253 VTSEGFE--LTRVTLVDVKGQVLIDKLVKPTNAITDYNTRFSGITYEMLDGVTTSLRDIQ 310
+G + L RVTLV+ G V+ D+ V+P + D+ T+ SGI L Q
Sbjct: 83 GVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTKISGIRPRDLRKA-KDFWAAQ 141
Query: 311 EEFLKLVYKETILVGHSLENDLLALKISHDL--VIDTAVLYKHPRGSSHKTALRFLAKRF 368
++ +L+ ILVGH+L NDL AL +SH + DT+ SS + ALR LA
Sbjct: 142 KKVAELINGR-ILVGHALSNDLKALLLSHPRKDIRDTSEYRPFLNRSSSRRALRHLAAEH 200
Query: 369 LKREIQQSGNGHDSIEDARATLEL 392
L IQ H +EDARA + L
Sbjct: 201 LGVNIQTG--EHCPVEDARAAMLL 222
>Glyma12g35630.2
Length = 221
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 216 DLEENGYSINKPGFLSTLPAPLGSPFHEMLAVDCEMCVTSEGFE--LTRVTLVDVKGQVL 273
D E N IN +P S + +A+DCEM +G + L RVTLV+ G V+
Sbjct: 51 DDESNDCQIN-----PLVPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVI 105
Query: 274 IDKLVKPTNAITDYNTRFSGITYEMLDGVTTSLRDIQEEFLKLVYKETILVGHSLENDLL 333
D+ V+P + D+ T+ SGI L Q++ +L+ ILVGH+L NDL
Sbjct: 106 YDEFVRPIERVVDFRTKISGIRPRDLRK-AKDFWAAQKKVAELINGR-ILVGHALSNDLK 163
Query: 334 ALKISH 339
AL +SH
Sbjct: 164 ALLLSH 169
>Glyma15g02690.1
Length = 366
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 46/223 (20%)
Query: 188 CVGTNSLSYMELTKDIPFPVTYYTLTEKDLEENGYSINKPGFLSTLPAPLGSPFHEMLAV 247
C GT++L Y++ D +D + ++ PG +A+
Sbjct: 108 CPGTSALPYIDSQFDC-----------QDFSDENHAGEGPG--------------GAVAM 142
Query: 248 DCEMCVT-SEG-FELT-RVTLVDVKGQVLIDKLVKPTNAITDYNTRFSGITYEMLDGVTT 304
DCEM S+G EL RV LVD +++ V+P +T+Y +G+T E L
Sbjct: 143 DCEMVGGGSDGSLELCARVCLVDEDERLIFHTYVQPEIPVTNYRYDITGLTEEHLRNA-M 201
Query: 305 SLRDIQEEFLKLVY-------------KETILVGHSLENDLLALKISH--DLVIDTAVLY 349
L++++E+ L++++ K +LVGH L +DL LK+++ ++ DTA
Sbjct: 202 PLKEVREKLLQILHNGESIGKVRLDGGKARLLVGHDLAHDLDCLKMNYPDHMLRDTAKYR 261
Query: 350 KHPRGSSHKTALRFLAKRFLKREIQQSGNGHDSIEDARATLEL 392
+ + +L++L + +L +I QSG HD ED + + L
Sbjct: 262 PLMKTNLVSHSLKYLTRTYLGYDI-QSGT-HDPYEDCISVMRL 302
>Glyma13g42740.1
Length = 366
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 21/166 (12%)
Query: 245 LAVDCEMCVT-SEG-FEL-TRVTLVDVKGQVLIDKLVKPTNAITDYNTRFSGITYEMLDG 301
+A+DCEM S+G EL RV LVD +++ V+P +T+Y +G+T E L
Sbjct: 140 VAIDCEMVGGGSDGSLELCARVCLVDEDERLIFHTYVQPEIPVTNYRYDITGLTEEHLKN 199
Query: 302 VTTSLRDIQEEFLKLVY-------------KETILVGHSLENDLLALKISH--DLVIDTA 346
L+ ++E+ L+++ K +LVGH L +DL LK+++ ++ DTA
Sbjct: 200 A-IPLKKVREKLLQILQNGESIGKVRLDGGKARLLVGHDLAHDLDCLKMNYPDHMLRDTA 258
Query: 347 VLYKHPRGSSHKTALRFLAKRFLKREIQQSGNGHDSIEDARATLEL 392
+ + +L++L + +L +I QSG HD ED + + L
Sbjct: 259 KYRPLMKTNLVSHSLKYLTRTYLGYDI-QSGT-HDPYEDCISVMRL 302