Miyakogusa Predicted Gene

Lj0g3v0277439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0277439.1 Non Chatacterized Hit- tr|E1BZZ4|E1BZZ4_CHICK
Uncharacterized protein OS=Gallus gallus GN=OTUD3
PE=4,30.53,2e-18,seg,NULL; OTU,Ovarian tumour, otubain; SEC-C,SEC-C
motif; SUBFAMILY NOT NAMED,NULL; OTU DOMAIN CONTA,CUFF.18417.1
         (314 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g18690.1                                                       268   4e-72
Glyma05g18260.1                                                       163   3e-40

>Glyma17g18690.1 
          Length = 233

 Score =  268 bits (686), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 147/238 (61%), Positives = 155/238 (65%), Gaps = 7/238 (2%)

Query: 79  SYHDGEHYNSVRLKDDPCDGPARSILIKADADLSAPSHQTKVTANKTCRQAGREVLQLGS 138
           SYHDGEHYNSVRLKDDPCDG AR I+I+ADADLS PSHQTKV  NK   +AG E  Q GS
Sbjct: 1   SYHDGEHYNSVRLKDDPCDGAARPIVIEADADLSVPSHQTKVVGNKFHGRAGWEAFQPGS 60

Query: 139 IKLVMAGTGCDNTAKVEQILEQVNGDVDAAIEFLIAEQGTEECSTKPDSLPGQVTTSGHD 198
           IKLVMAGTGC+N  KVEQILEQVNGDVDAAIEFLIAEQGTEECS   DSLP Q  T GHD
Sbjct: 61  IKLVMAGTGCENAEKVEQILEQVNGDVDAAIEFLIAEQGTEECSANSDSLPNQANTCGHD 120

Query: 199 ENKNHDQHKXXXXXXXXXXXXXXXXXKTNDNITLPKNDKSSLQKIPRNKVXXXXXXXXXX 258
           EN+NH QHK                 KTN   TL  ND     KIPRNKV          
Sbjct: 121 ENENHKQHKEDMVEESTNDESNNSSKKTNTYTTLQPND-----KIPRNKVCPCGSQKKYK 175

Query: 259 XXXXTTLGRQSAKFVVNQADDSXXXXXXXXXXXXXISAKAEAPC--DSVTPDMGALCI 314
               + LG+QSAKFVV+QA DS             ISAKAE P   D VTPDMGALCI
Sbjct: 176 ACCGSALGKQSAKFVVHQAADSKKGKKERKQGKKGISAKAEVPSEYDLVTPDMGALCI 233


>Glyma05g18260.1 
          Length = 197

 Score =  163 bits (412), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/186 (54%), Positives = 110/186 (59%), Gaps = 17/186 (9%)

Query: 107 ADADLSAPSHQTKVTANKTCRQAGREVLQLGSIKLVMAGTGCDNTAKVEQILEQVNGDVD 166
           ADADLS PSHQTKV  NK   +AGRE  Q GSI++VMAGTGC+N  KVEQILEQVNGDVD
Sbjct: 1   ADADLSVPSHQTKVVDNKPHGRAGREAFQPGSIRMVMAGTGCENAEKVEQILEQVNGDVD 60

Query: 167 AAIEFLIAEQGTEECSTKPDSLPGQ------------VTTSGHDENKNHDQHKXXXXXXX 214
           AAIEFLIAEQ TEECS   DSLP                 +G DENKNH QHK       
Sbjct: 61  AAIEFLIAEQRTEECSANSDSLPKLNFLFYCNSYLKFQAFAGVDENKNHKQHKEDMVEDS 120

Query: 215 XXXXXXXXXXKTNDNITLPKNDKSSLQKIPRNKVXXXXXXXXXXXXXXTTLGRQSAKFVV 274
                     KTN+NITL  ND      IPRNKV              + LG+QSAKFVV
Sbjct: 121 TNDESNNSSKKTNNNITLQSND-----MIPRNKVCPCGSKKKYKACCGSALGKQSAKFVV 175

Query: 275 NQADDS 280
           NQ  DS
Sbjct: 176 NQVADS 181