Miyakogusa Predicted Gene

Lj0g3v0277019.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0277019.1 Non Chatacterized Hit- tr|F6GUG8|F6GUG8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,52,0.000000000000003,Tub_2,LURP1-like domain; Tubby C-terminal
domain-like,Tubby C-terminal-like domain,gene.g21552.t1.1
         (164 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g38060.1                                                       218   2e-57
Glyma02g39920.1                                                       213   1e-55
Glyma14g38060.2                                                       123   1e-28
Glyma14g38060.3                                                       122   2e-28
Glyma18g44120.1                                                        62   2e-10
Glyma01g32040.1                                                        62   3e-10
Glyma01g32070.1                                                        60   8e-10
Glyma09g41560.1                                                        59   2e-09
Glyma03g05010.1                                                        58   5e-09

>Glyma14g38060.1 
          Length = 197

 Score =  218 bits (555), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 114/154 (74%), Positives = 123/154 (79%), Gaps = 6/154 (3%)

Query: 14  MELETSESSYPGSGSLHIPIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYK- 72
           ME  TSES YPGSG+  IPIDLFGSKKHAG  RGVLAF D  GNI+F VNRHPPN N   
Sbjct: 1   MESATSESPYPGSGNWEIPIDLFGSKKHAGVSRGVLAFTDESGNIVFRVNRHPPNPNSSP 60

Query: 73  ----KKLLLDASGNIIFSIYR-HEGSWKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFF 127
               KKLLLDASGN +FSIYR H GSWKCYKGN D +K+LVF V+RTLKTLTRVELEV F
Sbjct: 61  LPKDKKLLLDASGNTLFSIYRYHNGSWKCYKGNSDENKELVFSVQRTLKTLTRVELEVLF 120

Query: 128 DGERPNNEGCDLKLRGSPFQRSCSIYKDTDLVAQ 161
             ER N+EGCDLK++GSPFQRSC IYKD DLVAQ
Sbjct: 121 AAERSNDEGCDLKVKGSPFQRSCCIYKDADLVAQ 154


>Glyma02g39920.1 
          Length = 197

 Score =  213 bits (541), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/154 (71%), Positives = 123/154 (79%), Gaps = 6/154 (3%)

Query: 14  MELETSESSYPGSGSLHIPIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYK- 72
           MEL TSE SYPGSG+  IPIDLFGSKKHAG  RGVLAF D  GNI+F VNRHPPN N   
Sbjct: 1   MELATSELSYPGSGNWEIPIDLFGSKKHAGVSRGVLAFTDESGNIVFRVNRHPPNPNSLP 60

Query: 73  ----KKLLLDASGNIIFSIYR-HEGSWKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFF 127
               KKLLLDASGN +FSIYR H GSWKCYKGN + +K+LVF V+RTLKT+TRVELEV F
Sbjct: 61  LPKDKKLLLDASGNTLFSIYRYHNGSWKCYKGNSEENKELVFSVQRTLKTITRVELEVLF 120

Query: 128 DGERPNNEGCDLKLRGSPFQRSCSIYKDTDLVAQ 161
           + ER N+E CDLK++GSPF+RSC IYK  DLVAQ
Sbjct: 121 EAERSNDECCDLKVKGSPFKRSCCIYKHVDLVAQ 154


>Glyma14g38060.2 
          Length = 117

 Score =  123 bits (308), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 55/72 (76%), Positives = 61/72 (84%)

Query: 90  HEGSWKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQRS 149
             GSWKCYKGN D +K+LVF V+RTLKTLTRVELEV F  ER N+EGCDLK++GSPFQRS
Sbjct: 3   QNGSWKCYKGNSDENKELVFSVQRTLKTLTRVELEVLFAAERSNDEGCDLKVKGSPFQRS 62

Query: 150 CSIYKDTDLVAQ 161
           C IYKD DLVAQ
Sbjct: 63  CCIYKDADLVAQ 74


>Glyma14g38060.3 
          Length = 85

 Score =  122 bits (305), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 55/72 (76%), Positives = 61/72 (84%)

Query: 90  HEGSWKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQRS 149
             GSWKCYKGN D +K+LVF V+RTLKTLTRVELEV F  ER N+EGCDLK++GSPFQRS
Sbjct: 3   QNGSWKCYKGNSDENKELVFSVQRTLKTLTRVELEVLFAAERSNDEGCDLKVKGSPFQRS 62

Query: 150 CSIYKDTDLVAQ 161
           C IYKD DLVAQ
Sbjct: 63  CCIYKDADLVAQ 74


>Glyma18g44120.1 
          Length = 216

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 8/138 (5%)

Query: 32  PIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYRHE 91
           P+DL   KK      G     D  GN++F V          +++L+DA+GN + ++ R  
Sbjct: 36  PLDLAVVKKVMTLSDGNFVVTDVNGNVVFKVKGSLMTLR-DRRILVDAAGNPLVTLRRKI 94

Query: 92  GS----WKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQ 147
            +    W+ ++G     KDL+F ++R+     + +L+VF        + CD K++GS  +
Sbjct: 95  MTAHDRWQAFRGESTEAKDLIFTLKRSSLIQFKTKLDVFL-ANNTKEDVCDFKVKGSWLE 153

Query: 148 RSCSIY--KDTDLVAQVQ 163
           RSC +Y  +  ++VAQ+ 
Sbjct: 154 RSCVVYAGESNNIVAQMH 171


>Glyma01g32040.1 
          Length = 198

 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 14/130 (10%)

Query: 46  RGVLAFADAL------GNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYRHEGS----WK 95
           R VLA  D+       G I+F++ +      +  ++LLDA+G  + ++ R   S    W+
Sbjct: 26  RKVLALTDSFTVTDVNGQIVFSL-KASLMTLHDHRVLLDAAGEPVVTLRRKLMSAHDRWQ 84

Query: 96  CYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQRSCSIY-- 153
            ++G     KDL+F V+R+     + +L+VF        E CD K++GS F+RSC +Y  
Sbjct: 85  IFRGESTEPKDLIFSVKRSSFFQLKTKLDVFL-ANNTKEEVCDFKVKGSWFERSCVVYAG 143

Query: 154 KDTDLVAQVQ 163
           +  ++VAQ+ 
Sbjct: 144 ESLNIVAQMH 153


>Glyma01g32070.1 
          Length = 198

 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 14/130 (10%)

Query: 46  RGVLAFADAL------GNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYRHEGS----WK 95
           R VLA  D+       G I+F++ +      +  ++LLDA+G  + ++ R   +    W+
Sbjct: 26  RKVLALTDSFTVTDVNGQIVFSL-KASLMTLHDHRVLLDAAGEPVVTLRRKLMTAHDRWE 84

Query: 96  CYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQRSCSIY-- 153
            ++G     KDL+F V+R+     + +L+VF        E CD K++GS F+RSC +Y  
Sbjct: 85  VFRGGSTEPKDLIFSVKRSSFFQLKTKLDVFL-ANNTKEEVCDFKVKGSWFERSCVVYAG 143

Query: 154 KDTDLVAQVQ 163
           +  ++VAQ+ 
Sbjct: 144 ESLNIVAQMH 153


>Glyma09g41560.1 
          Length = 215

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 9/138 (6%)

Query: 32  PIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYRHE 91
           P+DL   KK            D  GNI+F V          +++LLDA+GN + ++ R  
Sbjct: 36  PVDLAVVKKVMTISDN-FVVTDVNGNIVFKVKGSLATLR-DRRVLLDAAGNPLVTLRRKI 93

Query: 92  GS----WKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQ 147
            +    W+ ++G     KDL+F ++R+     + +L VF        + CD K++GS  +
Sbjct: 94  MTAHDRWQAFRGESTDAKDLIFTLKRSSLIQFKTKLHVFL-ANNTKEDVCDFKVKGSWLE 152

Query: 148 RSCSIY--KDTDLVAQVQ 163
           RSC +Y  +  ++VAQ+ 
Sbjct: 153 RSCVVYAGESNNIVAQMH 170


>Glyma03g05010.1 
          Length = 198

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 12/128 (9%)

Query: 46  RGVLAFADAL------GNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYRHEGS----WK 95
           R VL  +D+       G I+F + +      +  ++LLDA+G  I ++ R   S    W+
Sbjct: 26  RKVLTLSDSFTVTDVNGKIVFNL-KGSLMTLHDHRVLLDAAGEPIVTLRRKIMSAHDQWQ 84

Query: 96  CYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQRSCSIYKD 155
            ++G     KDL+F V+++     + +L+VF        E CD K++GS F+RSC +Y  
Sbjct: 85  VFRGESTELKDLIFSVKKSSVFQLKTKLDVFL-ANNTKEEVCDFKVKGSWFERSCVVYAG 143

Query: 156 TDLVAQVQ 163
             L    Q
Sbjct: 144 ESLTIAAQ 151