Miyakogusa Predicted Gene

Lj0g3v0276759.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0276759.1 tr|A9S0R2|A9S0R2_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_162167,35.2,0.00000003,no description,NULL; SUBFAMILY
NOT NAMED,NULL; RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATED,NULL;
L30e,CUFF.18364.1
         (183 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g05650.2                                                       288   3e-78
Glyma04g05650.1                                                       288   3e-78
Glyma10g27820.2                                                       265   1e-71
Glyma10g27820.1                                                       265   1e-71

>Glyma04g05650.2 
          Length = 213

 Score =  288 bits (736), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 144/182 (79%), Positives = 157/182 (86%), Gaps = 2/182 (1%)

Query: 1   MPSRSSAKAPKKQGNNSNTGGTASLENNSYEGERLTHLLQSIRRETELARRLDGCSLPEK 60
           MPSR+SAK PK  GNNSN+   ASLENN YEGERLT LLQSIRR  + AR LDG SLPEK
Sbjct: 1   MPSRNSAKTPKNDGNNSNSS-LASLENNCYEGERLTSLLQSIRRGIQSARHLDGSSLPEK 59

Query: 61  IWLKQQFSIGVNDVTRVLERMEPCAELESSAELIPLIRSNHKAPSVKLQAVLVASDCNPR 120
           IWLKQQFSIGVNDVTRVLERM+PC ELESS ELI L RSNH A SVKLQAVLVASDCNPR
Sbjct: 60  IWLKQQFSIGVNDVTRVLERMKPCTELESSTELISL-RSNHTASSVKLQAVLVASDCNPR 118

Query: 121 WLTKHLQSLASSRSVPLIFIRDNKEGSLRLGELVKLKTAVAIGIKVKGSVINKTVEDIIQ 180
           WLTKHL SLASSR+VPL+F+RD K+GSLRLGELV+LKTA+AIGIKVKGS INK ++ +IQ
Sbjct: 119 WLTKHLLSLASSRNVPLVFVRDTKQGSLRLGELVQLKTAIAIGIKVKGSTINKIIQQVIQ 178

Query: 181 AD 182
            D
Sbjct: 179 GD 180


>Glyma04g05650.1 
          Length = 213

 Score =  288 bits (736), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 144/182 (79%), Positives = 157/182 (86%), Gaps = 2/182 (1%)

Query: 1   MPSRSSAKAPKKQGNNSNTGGTASLENNSYEGERLTHLLQSIRRETELARRLDGCSLPEK 60
           MPSR+SAK PK  GNNSN+   ASLENN YEGERLT LLQSIRR  + AR LDG SLPEK
Sbjct: 1   MPSRNSAKTPKNDGNNSNSS-LASLENNCYEGERLTSLLQSIRRGIQSARHLDGSSLPEK 59

Query: 61  IWLKQQFSIGVNDVTRVLERMEPCAELESSAELIPLIRSNHKAPSVKLQAVLVASDCNPR 120
           IWLKQQFSIGVNDVTRVLERM+PC ELESS ELI L RSNH A SVKLQAVLVASDCNPR
Sbjct: 60  IWLKQQFSIGVNDVTRVLERMKPCTELESSTELISL-RSNHTASSVKLQAVLVASDCNPR 118

Query: 121 WLTKHLQSLASSRSVPLIFIRDNKEGSLRLGELVKLKTAVAIGIKVKGSVINKTVEDIIQ 180
           WLTKHL SLASSR+VPL+F+RD K+GSLRLGELV+LKTA+AIGIKVKGS INK ++ +IQ
Sbjct: 119 WLTKHLLSLASSRNVPLVFVRDTKQGSLRLGELVQLKTAIAIGIKVKGSTINKIIQQVIQ 178

Query: 181 AD 182
            D
Sbjct: 179 GD 180


>Glyma10g27820.2 
          Length = 188

 Score =  265 bits (678), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 144/183 (78%), Positives = 159/183 (86%), Gaps = 2/183 (1%)

Query: 1   MPSRSSAKAPKKQGNNSNTGGTASLENNSYEGERLTHLLQSIRRETELARRLDGCSLPEK 60
           MPSR+SAK PKK GNNSN+   +SLENN YEGERLT+LLQSIRR  + AR LDG SLPEK
Sbjct: 1   MPSRNSAKTPKKDGNNSNSS-LSSLENNFYEGERLTNLLQSIRRGIQSARHLDGSSLPEK 59

Query: 61  IWLKQQFSIGVNDVTRVLERMEPCAELESSAELIPLIRSNHKAPSVKLQAVLVASDCNPR 120
           IWLKQQFSIGVNDVTRVLERM+PC ELESS ELI L RSNH A SVKLQAVLVASDCNPR
Sbjct: 60  IWLKQQFSIGVNDVTRVLERMKPCTELESSTELISL-RSNHTASSVKLQAVLVASDCNPR 118

Query: 121 WLTKHLQSLASSRSVPLIFIRDNKEGSLRLGELVKLKTAVAIGIKVKGSVINKTVEDIIQ 180
           WLTKHL SLASSR+VPL+F+RD K+GSLRLGELV+LKTA+AIGIKVKGS INK ++ +IQ
Sbjct: 119 WLTKHLLSLASSRNVPLVFVRDTKQGSLRLGELVQLKTAIAIGIKVKGSTINKIIQQVIQ 178

Query: 181 ADA 183
            D 
Sbjct: 179 GDG 181


>Glyma10g27820.1 
          Length = 188

 Score =  265 bits (678), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 144/183 (78%), Positives = 159/183 (86%), Gaps = 2/183 (1%)

Query: 1   MPSRSSAKAPKKQGNNSNTGGTASLENNSYEGERLTHLLQSIRRETELARRLDGCSLPEK 60
           MPSR+SAK PKK GNNSN+   +SLENN YEGERLT+LLQSIRR  + AR LDG SLPEK
Sbjct: 1   MPSRNSAKTPKKDGNNSNSS-LSSLENNFYEGERLTNLLQSIRRGIQSARHLDGSSLPEK 59

Query: 61  IWLKQQFSIGVNDVTRVLERMEPCAELESSAELIPLIRSNHKAPSVKLQAVLVASDCNPR 120
           IWLKQQFSIGVNDVTRVLERM+PC ELESS ELI L RSNH A SVKLQAVLVASDCNPR
Sbjct: 60  IWLKQQFSIGVNDVTRVLERMKPCTELESSTELISL-RSNHTASSVKLQAVLVASDCNPR 118

Query: 121 WLTKHLQSLASSRSVPLIFIRDNKEGSLRLGELVKLKTAVAIGIKVKGSVINKTVEDIIQ 180
           WLTKHL SLASSR+VPL+F+RD K+GSLRLGELV+LKTA+AIGIKVKGS INK ++ +IQ
Sbjct: 119 WLTKHLLSLASSRNVPLVFVRDTKQGSLRLGELVQLKTAIAIGIKVKGSTINKIIQQVIQ 178

Query: 181 ADA 183
            D 
Sbjct: 179 GDG 181