Miyakogusa Predicted Gene

Lj0g3v0276439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0276439.1 Non Chatacterized Hit- tr|H2W4K5|H2W4K5_CAEJA
Uncharacterized protein OS=Caenorhabditis japonica GN=,40.41,6e-19,no
description,Protein N-terminal glutamine amidohydrolase, alpha beta
roll; SUBFAMILY NOT NAMED,NUL,CUFF.18339.1
         (218 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g20590.1                                                       375   e-104

>Glyma10g20590.1 
          Length = 219

 Score =  375 bits (964), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/219 (82%), Positives = 192/219 (87%), Gaps = 1/219 (0%)

Query: 1   MTTLTMDASHFHHTPFYCEENVYLLCKKLCDDGIANAEGSDLFVAFISNEKKQIPLWNQK 60
           M T TMD  HFHHTPFYCEENVYLLCKKLC+DGIANA+GSDLFVAFISNEKKQIPLWNQK
Sbjct: 1   MATSTMDILHFHHTPFYCEENVYLLCKKLCNDGIANADGSDLFVAFISNEKKQIPLWNQK 60

Query: 61  ASTRADGVILWDYHVICIQAIQGDSPPLVWDLDSTLPFPSPLASYVSETIRPSFQLFSEY 120
           AS RADGVILWDYHVICIQ  QG  PPLVWDLDSTLPFPSPL SYVSETIRPSFQLFS+Y
Sbjct: 61  ASKRADGVILWDYHVICIQIKQGAVPPLVWDLDSTLPFPSPLPSYVSETIRPSFQLFSDY 120

Query: 121 NRLFRIVHAPMFLRCFASDRRHMKVSSGNWIEDPPPHEPIVAEDGTVHNLNEYISMSVSD 180
           NRLFR+VHAP+FLRCFASDRRHMK S GNWIE+PP HEPIVAED TVHNLNEYI++S +D
Sbjct: 121 NRLFRVVHAPLFLRCFASDRRHMKDSGGNWIEEPPQHEPIVAEDRTVHNLNEYINISAAD 180

Query: 181 VDSNTKISSVKDATFTQKHGVVIKENQVEELF-SLISLQ 218
             ++  ISSVKDA  TQ HGVVIKENQ+EE    L SLQ
Sbjct: 181 AITDVTISSVKDAISTQTHGVVIKENQLEEFICQLSSLQ 219