Miyakogusa Predicted Gene
- Lj0g3v0276329.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0276329.2 tr|Q1PFY7|Q1PFY7_ARATH CCT motif-containing
protein OS=Arabidopsis thaliana GN=At1g04500 PE=2
SV=1,42.75,6e-19,seg,NULL; CCT,CCT domain,CUFF.18336.2
(248 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g32330.1 206 2e-53
Glyma13g40610.1 197 1e-50
Glyma12g07920.1 107 1e-23
Glyma11g15510.1 75 8e-14
Glyma11g02490.1 68 7e-12
Glyma08g01980.1 67 1e-11
Glyma01g43000.1 65 5e-11
Glyma1472s00200.1 65 9e-11
Glyma10g26990.1 61 1e-09
Glyma15g41030.1 57 2e-08
Glyma10g33390.1 56 3e-08
Glyma20g34250.1 56 3e-08
Glyma05g37600.1 56 4e-08
Glyma08g17980.1 56 4e-08
Glyma20g21380.1 53 4e-07
>Glyma15g32330.1
Length = 241
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/239 (50%), Positives = 136/239 (56%), Gaps = 20/239 (8%)
Query: 17 ELTEFDTLSQLXXXXXXXXXXXX-------XXXXXXXXPTSEAQASPTLMQRSVSSHSLH 69
E+TEF+TLSQL PTS SP LMQRSVSSHS +
Sbjct: 16 EVTEFETLSQLNNSETSYYYNSNCSSGYSSYGGSPSPTPTS--VPSPNLMQRSVSSHSFY 73
Query: 70 TNTKSNNNGTCHHPFSAFFAELLDSDQDTPAVRRVYSAGDLQRINXXXXXXXXXXXXXXX 129
N NNGT HHPFSA FAELLDSD D P VRRV S GDLQ+IN
Sbjct: 74 CN----NNGT-HHPFSALFAELLDSDVDAP-VRRVCSTGDLQKINGMQHNHHSDSPLSSE 127
Query: 130 XXXXXXMIIEGMNRVCRYSPEEKKMRIEXXXXXXXXXXXXXXXXYACRKTLADSRPRVRG 189
MIIEGM+R CRYSPEEKK+RIE YACRKTLADSRPR+RG
Sbjct: 128 SS----MIIEGMSRACRYSPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRG 183
Query: 190 RFARNDETDQKPTVQWSHIGAAXXXXXXXXSWVSIFDSIVAAANLTQESQASSSFGLLY 248
RFARNDE D+ T+QWS IGA +WV++ DS+V AAN QES +S+FGL Y
Sbjct: 184 RFARNDEIDKNTTLQWSQIGAGEEEDEEDENWVTMLDSLV-AANFAQESHGTSTFGLFY 241
>Glyma13g40610.1
Length = 178
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 120/190 (63%), Gaps = 12/190 (6%)
Query: 59 MQRSVSSHSLHTNTKSNNNGTCHHPFSAFFAELLDSDQDTPAVRRVYSAGDLQRINXXXX 118
MQRSVSSHS H N NN T HHPFSA FA+LLDSD D+P VRRV S GDLQRIN
Sbjct: 1 MQRSVSSHSFHCN----NNAT-HHPFSALFAQLLDSD-DSP-VRRVCSTGDLQRINGMQH 53
Query: 119 XXXXXXXXXXXXXXXXXMIIEGMNRVCRYSPEEKKMRIEXXXXXXXXXXXXXXXXYACRK 178
MIIEGM+R CRYSPEEKK+RIE YACRK
Sbjct: 54 NHHSDSPLSSESS----MIIEGMSRACRYSPEEKKVRIERYRSKRSQRNFNKKIKYACRK 109
Query: 179 TLADSRPRVRGRFARNDETDQKPTVQWSHIGAAXXXXXXXXSWVSIFDSIVAAANLTQES 238
TLADSRPR+RGRFARNDE D+ T+QWS IGA +W+++ DSIV AAN QES
Sbjct: 110 TLADSRPRIRGRFARNDEIDKNTTIQWSQIGAGEDEDEEDENWITMLDSIV-AANFAQES 168
Query: 239 QASSSFGLLY 248
Q SSSFGL Y
Sbjct: 169 QGSSSFGLFY 178
>Glyma12g07920.1
Length = 108
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 141 MNRVCRYSPEEKKMRIEXXXXXXXXXXXXXXXXYACRKTLADSRPRVRGRFARNDETDQK 200
M+R YSPEEKK+RIE YACRKTLADSRPR+RGRFARN E
Sbjct: 1 MSRTSPYSPEEKKVRIERYRNKRNQRNYCKKIKYACRKTLADSRPRIRGRFARNGEIAIN 60
Query: 201 PTVQWSHIGAAXXXXXXXXSWVSIFDSIVAAANLTQESQA-SSSFGLLY 248
P QWSH+G +W + FDS+V ANL QE Q SSSFG+ Y
Sbjct: 61 PPAQWSHMGNGEEEEEEEENWANFFDSLV-PANLAQEPQGSSSSFGVFY 108
>Glyma11g15510.1
Length = 53
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 36/53 (67%)
Query: 174 YACRKTLADSRPRVRGRFARNDETDQKPTVQWSHIGAAXXXXXXXXSWVSIFD 226
YACRKTLADSRPR+RGRFARNDET + P QWSH+G +W FD
Sbjct: 1 YACRKTLADSRPRIRGRFARNDETAKNPPAQWSHMGNGEEEDEEEENWADFFD 53
>Glyma11g02490.1
Length = 292
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Query: 100 AVRRVYSAGDLQRINXXXXXXXXXXXXXXXXXXXXXMIIEGMNRVCRYSPEEKKMRIEXX 159
++RRV S GDLQ + ++ EG +V RYS EE+K +I
Sbjct: 172 SMRRVCSTGDLQNMKAADMSQTESP-----------LLEEGNFKVRRYSAEERKEKISKY 220
Query: 160 XXXXXXXXXXXXXXYACRKTLADSRPRVRGRFARNDETDQKPTVQWSHIGAAXXXXXXXX 219
YACRKTLAD+R R+RGRFARNDE + P S ++
Sbjct: 221 RAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDEIREIPKAPCS---SSTTEEYEDE 277
Query: 220 SWVSIFDSIVAAAN 233
WV + + N
Sbjct: 278 FWVEFIEGLNEEVN 291
>Glyma08g01980.1
Length = 304
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 48/106 (45%), Gaps = 27/106 (25%)
Query: 101 VRRVYSAGDLQRINXXXXXXXXXXXXXXXXXXXXXMIIEGMNRVCRYSPEEKKMRIEXXX 160
+RRV S GDLQ N +V RYS EE+K RI
Sbjct: 182 MRRVCSTGDLQESNF---------------------------KVGRYSAEERKERISKYR 214
Query: 161 XXXXXXXXXXXXXYACRKTLADSRPRVRGRFARNDETDQKPTVQWS 206
YACRKTLAD+RPR+RGRFARNDE+ + V S
Sbjct: 215 AKRNQRNFNKTIKYACRKTLADNRPRIRGRFARNDESSETLKVSCS 260
>Glyma01g43000.1
Length = 139
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 55/125 (44%), Gaps = 23/125 (18%)
Query: 80 CH---HPFSAFFAELLDSDQDTPAVRRVYSAGDLQRINXXXXXXXXXXXXXXXXXXXXXM 136
CH P + FFA +RRV S GDLQ + +
Sbjct: 5 CHALNSPENTFFA---------AQMRRVCSTGDLQNMKSTDMSQKGSP-----------L 44
Query: 137 IIEGMNRVCRYSPEEKKMRIEXXXXXXXXXXXXXXXXYACRKTLADSRPRVRGRFARNDE 196
+ E +V RYS EE+K +I YACRKTLAD+R R+RGRFARNDE
Sbjct: 45 LEEANFKVGRYSAEERKEKISKYRAKRSQRKFNKIIKYACRKTLADNRTRIRGRFARNDE 104
Query: 197 TDQKP 201
+ P
Sbjct: 105 ISEIP 109
>Glyma1472s00200.1
Length = 163
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 58 LMQRSVSSHSLHTNTKSNNNGTCHHPFSAF---FAELLDSDQDTPAVRRVYSAGDLQRIN 114
++QRSVSSHSL N GT HHPFS F FAE +DS+ VRR S GDLQR N
Sbjct: 56 VVQRSVSSHSLQKN-----GGTHHHPFSEFSPLFAEFIDSENG--PVRRACSTGDLQRFN 108
Query: 115 XXXXXXXXXXXXXXXXXXXXXMIIEGMNRVCRYSPEEKKMRIE 157
M+R YSPEEKK+RIE
Sbjct: 109 GMQHFQHSDSSLSSESSLIIEE----MSRTSPYSPEEKKVRIE 147
>Glyma10g26990.1
Length = 416
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%)
Query: 98 TPAVRRVYSAGDLQRINXXXXXXXXXXXXXXXXXXXXXMIIEGMNRVCRYSPEEKKMRIE 157
T +++RV++ DLQ + + + +V + S E++K +I
Sbjct: 268 TDSIQRVFNPPDLQALGTETQKLVAGAGSSATLTPEISHLEDSNLKVGKLSVEQRKEKIH 327
Query: 158 XXXXXXXXXXXXXXXXYACRKTLADSRPRVRGRFARNDE 196
YACRKTLADSRPRVRGRFA+NDE
Sbjct: 328 RYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDE 366
>Glyma15g41030.1
Length = 305
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 32/54 (59%)
Query: 143 RVCRYSPEEKKMRIEXXXXXXXXXXXXXXXXYACRKTLADSRPRVRGRFARNDE 196
+V RYS EE+K RI YACRKTLAD R RVRGRFARN+E
Sbjct: 168 KVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNE 221
>Glyma10g33390.1
Length = 394
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 98 TPAVRRVYSAGDLQRINXXXXXXXXXXXXXXXXXXXXXMIIEGMNRVCRYSPEEKKMRIE 157
T +++RV++ DLQ + + +V + S E++K +I
Sbjct: 243 TDSIQRVFNPPDLQALGTESQQLVPGAGSSASLPEISNLEDSSF-KVGKLSVEQRKEKIN 301
Query: 158 XXXXXXXXXXXXXXXXYACRKTLADSRPRVRGRFARNDE 196
YACRKTLADSRPRVRGRFA+ND+
Sbjct: 302 RYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDD 340
>Glyma20g34250.1
Length = 455
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%)
Query: 143 RVCRYSPEEKKMRIEXXXXXXXXXXXXXXXXYACRKTLADSRPRVRGRFARNDE 196
+V + S E++K +I YACRKTLADSRPRVRGRFA+ND+
Sbjct: 348 KVGKLSVEQRKEKINRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDD 401
>Glyma05g37600.1
Length = 219
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/28 (78%), Positives = 25/28 (89%)
Query: 174 YACRKTLADSRPRVRGRFARNDETDQKP 201
YACRKTLAD+RPR+RGRFARNDE + P
Sbjct: 191 YACRKTLADNRPRIRGRFARNDEASETP 218
>Glyma08g17980.1
Length = 200
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 32/54 (59%)
Query: 143 RVCRYSPEEKKMRIEXXXXXXXXXXXXXXXXYACRKTLADSRPRVRGRFARNDE 196
+V RYS EE+K RI YACRKTLAD R RVRGRFARN+E
Sbjct: 90 KVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNE 143
>Glyma20g21380.1
Length = 385
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/23 (91%), Positives = 23/23 (100%)
Query: 174 YACRKTLADSRPRVRGRFARNDE 196
YACRKTLADSRPRVRGRFA+ND+
Sbjct: 310 YACRKTLADSRPRVRGRFAKNDD 332