Miyakogusa Predicted Gene

Lj0g3v0276329.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0276329.1 Non Chatacterized Hit- tr|K4DAZ2|K4DAZ2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,49.29,2e-17,seg,NULL,CUFF.18336.1
         (158 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g32330.1                                                       114   4e-26
Glyma13g40610.1                                                       101   3e-22
Glyma1472s00200.1                                                      66   1e-11

>Glyma15g32330.1 
          Length = 241

 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/149 (51%), Positives = 82/149 (55%), Gaps = 19/149 (12%)

Query: 17  ELTEFDTLSQLXXXXXX-------XXXXXXXXXXXXXXPTSEAQASPTLMQRSVSSHSLH 69
           E+TEF+TLSQL                           PTS    SP LMQRSVSSHS +
Sbjct: 16  EVTEFETLSQLNNSETSYYYNSNCSSGYSSYGGSPSPTPTS--VPSPNLMQRSVSSHSFY 73

Query: 70  TNTKSNNNGTCHHPFSAFFAELLDSDQDTPAVRRVYSAGDLQRINXXXXXXXXXXXXXXX 129
            N    NNGT HHPFSA FAELLDSD D P VRRV S GDLQ+IN               
Sbjct: 74  CN----NNGT-HHPFSALFAELLDSDVDAP-VRRVCSTGDLQKINGMQHNHHSDSPLSSE 127

Query: 130 XXXXXXMIIEGMNRVCRYSPEEKKMRIER 158
                 MIIEGM+R CRYSPEEKK+RIER
Sbjct: 128 SS----MIIEGMSRACRYSPEEKKVRIER 152


>Glyma13g40610.1 
          Length = 178

 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/100 (61%), Positives = 65/100 (65%), Gaps = 11/100 (11%)

Query: 59  MQRSVSSHSLHTNTKSNNNGTCHHPFSAFFAELLDSDQDTPAVRRVYSAGDLQRINXXXX 118
           MQRSVSSHS H N    NN T HHPFSA FA+LLDSD D+P VRRV S GDLQRIN    
Sbjct: 1   MQRSVSSHSFHCN----NNAT-HHPFSALFAQLLDSD-DSP-VRRVCSTGDLQRINGMQH 53

Query: 119 XXXXXXXXXXXXXXXXXMIIEGMNRVCRYSPEEKKMRIER 158
                            MIIEGM+R CRYSPEEKK+RIER
Sbjct: 54  NHHSDSPLSSESS----MIIEGMSRACRYSPEEKKVRIER 89


>Glyma1472s00200.1 
          Length = 163

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 52/104 (50%), Gaps = 14/104 (13%)

Query: 58  LMQRSVSSHSLHTNTKSNNNGTCHHPFSAF---FAELLDSDQDTPAVRRVYSAGDLQRIN 114
           ++QRSVSSHSL  N      GT HHPFS F   FAE +DS+     VRR  S GDLQR N
Sbjct: 56  VVQRSVSSHSLQKN-----GGTHHHPFSEFSPLFAEFIDSENG--PVRRACSTGDLQRFN 108

Query: 115 XXXXXXXXXXXXXXXXXXXXXMIIEGMNRVCRYSPEEKKMRIER 158
                                     M+R   YSPEEKK+RIER
Sbjct: 109 GMQHFQHSDSSLSSESSLIIEE----MSRTSPYSPEEKKVRIER 148