Miyakogusa Predicted Gene

Lj0g3v0276059.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0276059.1 tr|G7IIZ6|G7IIZ6_MEDTR Zinc finger CCCH
domain-containing protein OS=Medicago truncatula
GN=MTR_2g06,38.69,0.0000000002,Surp module (SWAP domain),SWAP/Surp;
seg,NULL; Surp,SWAP/Surp; ZF_C3H1,Zinc finger, CCCH-type;
SURP,,CUFF.18365.1
         (859 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g32240.1                                                       194   2e-49

>Glyma04g32240.1 
          Length = 432

 Score =  194 bits (494), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/372 (38%), Positives = 166/372 (44%), Gaps = 102/372 (27%)

Query: 61  MPNVGQSYATPSQMHHGNGMAPPHSYSTLGQNSYSTLGQNSQHSLNIEXXXXXXXXXXXX 120
           MPN GQSYA PSQ+HH N                 T+G  +                   
Sbjct: 142 MPNSGQSYAVPSQLHHVN-----------------TMGPQT------------------- 165

Query: 121 XXXXXXXQEPSWAXXXXXXXXXXXXXXXXSSSQGQILYNSPFHQPPSQPGDIQNLQRSHN 180
                     SWA                S+SQG ILYN PFH PP Q GD+QNL   HN
Sbjct: 166 ----------SWAPAPPTRVLPPPPPPP-SASQGHILYNPPFHGPPLQSGDVQNL---HN 211

Query: 181 TLXXXXXXXTCGPGGVNAHSTVGNYQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                          V  HSTVGNY                                   
Sbjct: 212 APPPPPPS-------VYFHSTVGNYH------VPSGVPPPLPSSPPPVLPAPPPVTSASS 258

Query: 241 XXXRTDDLNCLKVSGSESKDMDSVDRVVAPCPSGTVPLCNSDANQGGGSCREVAVAGRDE 300
              RTDD + +KVSG ESK  + VD VVA  PSG VP+  SD+N  G SCREVA AGRDE
Sbjct: 259 NGARTDDTHSVKVSGLESKAAELVDGVVASHPSGVVPVHGSDSNWDGASCREVAGAGRDE 318

Query: 301 LLSTRSVILNLPPAPTKPTDEKTVQKIEGFCQLIAENGADIEDKIRQDEFQNPEYAFLFG 360
                    +LPP   KPT+EKTVQKIE  CQLIAE                        
Sbjct: 319 ---------DLPPP--KPTEEKTVQKIEALCQLIAEK----------------------- 344

Query: 361 GDPGTEAAISHSYFLWVKKKYKLELRGHEENSESQLRPLAVSSFQEQHHLHAATVNADSD 420
            DPGTEAAI+H+YFLW+KKKY L+ R HE+  +S +    V S  EQ+ LH  TV+ADSD
Sbjct: 345 -DPGTEAAIAHTYFLWMKKKYNLDTRWHEKRRQSDI----VYSSGEQYRLHVTTVSADSD 399

Query: 421 MEMEDDITLSDK 432
           MEME    LS K
Sbjct: 400 MEMEVCSLLSAK 411