Miyakogusa Predicted Gene
- Lj0g3v0275819.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0275819.1 Non Chatacterized Hit- tr|I3SST4|I3SST4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.97,0,seg,NULL;
LDL receptor-like module,Low-density lipoprotein (LDL) receptor class
A repeat; N-LINKED O,CUFF.18291.1
(196 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g14110.1 242 2e-64
Glyma06g43790.1 241 4e-64
Glyma06g43790.2 180 1e-45
Glyma07g35090.1 149 2e-36
Glyma20g02950.2 144 4e-35
Glyma20g02950.1 144 4e-35
Glyma12g19470.1 74 9e-14
Glyma08g36100.1 57 2e-08
>Glyma12g14110.1
Length = 188
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/159 (75%), Positives = 129/159 (81%), Gaps = 7/159 (4%)
Query: 1 MDSHSFLCFHSACLLLFASTAGCLSHPSLLGVHPLDEKYYGSEVIKCKDGSKSFSRDRIN 60
MDSH L F AC +LFAS A C SHPSLLG+HPLDEKYY SEVIKC+DGSKSFSRDR+N
Sbjct: 1 MDSHCLLRFRFACFVLFASVACCFSHPSLLGIHPLDEKYYNSEVIKCRDGSKSFSRDRLN 60
Query: 61 DNFCDCPDGTDEPGTSACPKGKFYCKNLGSKPQFIFSSHVNDNFCDCCDGSDEYDGTIHC 120
DNFCDCPDGTDEPGTSACP GKFYC+NLGSKPQFI SSHVND+FCDCCDGSDEYDG I C
Sbjct: 61 DNFCDCPDGTDEPGTSACPNGKFYCRNLGSKPQFIVSSHVNDHFCDCCDGSDEYDGIICC 120
Query: 121 PNTCVMGGNSEYMIGNYNKKVSGFAEKETKNGVKSGESV 159
PNTCVMGGN+E N + S +NGVKS ESV
Sbjct: 121 PNTCVMGGNAESTFSNCKSEAS-------QNGVKSEESV 152
>Glyma06g43790.1
Length = 189
Score = 241 bits (615), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/162 (75%), Positives = 130/162 (80%), Gaps = 8/162 (4%)
Query: 1 MDSHSF-LCFHSACLLLFASTAGCLSHPSLLGVHPLDEKYYGSEVIKCKDGSKSFSRDRI 59
MD H F L FH AC LLFA+ A C SHPSLLG+HPLDEKYY SE+IKCKD SKSFSRDR+
Sbjct: 1 MDLHCFFLRFHFACFLLFATAACCFSHPSLLGIHPLDEKYYSSEMIKCKDESKSFSRDRL 60
Query: 60 NDNFCDCPDGTDEPGTSACPKGKFYCKNLGSKPQFIFSSHVNDNFCDCCDGSDEYDGTIH 119
NDNFCDCPDGTDEPGTSACP GKFYC+NLGSKPQFI SSHVND+FCDCCDGSDEYDGTI
Sbjct: 61 NDNFCDCPDGTDEPGTSACPNGKFYCRNLGSKPQFIVSSHVNDHFCDCCDGSDEYDGTIC 120
Query: 120 CPNTCVMGGNSEYMIGNYNKKVSGFAEKETKNGVKSGESVRN 161
CPNTCVMGGN+E N K S KNGVKS ESV
Sbjct: 121 CPNTCVMGGNAESTFRNCKSKAS-------KNGVKSEESVHT 155
>Glyma06g43790.2
Length = 145
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/116 (78%), Positives = 96/116 (82%), Gaps = 7/116 (6%)
Query: 44 VIKCKDGSKSFSRDRINDNFCDCPDGTDEPGTSACPKGKFYCKNLGSKPQFIFSSHVNDN 103
+IKCKD SKSFSRDR+NDNFCDCPDGTDEPGTSACP GKFYC+NLGSKPQFI SSHVND+
Sbjct: 1 MIKCKDESKSFSRDRLNDNFCDCPDGTDEPGTSACPNGKFYCRNLGSKPQFIVSSHVNDH 60
Query: 104 FCDCCDGSDEYDGTIHCPNTCVMGGNSEYMIGNYNKKVSGFAEKETKNGVKSGESV 159
FCDCCDGSDEYDGTI CPNTCVMGGN+E N K S KNGVKS ESV
Sbjct: 61 FCDCCDGSDEYDGTICCPNTCVMGGNAESTFRNCKSKAS-------KNGVKSEESV 109
>Glyma07g35090.1
Length = 629
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 86/119 (72%), Gaps = 3/119 (2%)
Query: 29 LLGVHPLDEKYY-GSEVIKCKDGSKSFSRDRINDNFCDCPDGTDEPGTSACPKGKFYCKN 87
LG+ P D+KYY S+VI+CKDGS F++ ++ND+FCDC DGTDEPGTSACP GKFYC+N
Sbjct: 25 FLGISPEDDKYYKASDVIRCKDGSGKFTKAQLNDDFCDCADGTDEPGTSACPGGKFYCRN 84
Query: 88 LGSKPQFIFSSHVNDNFCDCCDGSDEYDGTIHCPNTCVMGGNSEYMIGNYNKKVSGFAE 146
G P ++FSS VND CDCCDG+DEYDG + CPNTC G + KK++ + E
Sbjct: 85 AGHSPVYLFSSRVNDGICDCCDGTDEYDGQVKCPNTCWEAG--KVARDRLEKKIATYQE 141
>Glyma20g02950.2
Length = 568
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
Query: 29 LLGVHPLDEKYY-GSEVIKCKDGSKSFSRDRINDNFCDCPDGTDEPGTSACPKGKFYCKN 87
LGV P D+ YY S+VI CKDGS F++ + ND+FCDC DGTDEPGTSACP GKFYC+N
Sbjct: 31 FLGVAPEDDDYYKSSDVISCKDGSGKFTKAQFNDDFCDCADGTDEPGTSACPGGKFYCRN 90
Query: 88 LGSKPQFIFSSHVNDNFCDCCDGSDEYDGTIHCPNTCVMGGNSEYMIGNYNKKVSGFAE 146
G P ++FSS VND CDCCDG+DEYDG + CPNTC G + KK++ + E
Sbjct: 91 AGHSPVYLFSSRVNDGICDCCDGTDEYDGQVKCPNTCWEAG--KVARDRLKKKIATYQE 147
>Glyma20g02950.1
Length = 568
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
Query: 29 LLGVHPLDEKYY-GSEVIKCKDGSKSFSRDRINDNFCDCPDGTDEPGTSACPKGKFYCKN 87
LGV P D+ YY S+VI CKDGS F++ + ND+FCDC DGTDEPGTSACP GKFYC+N
Sbjct: 31 FLGVAPEDDDYYKSSDVISCKDGSGKFTKAQFNDDFCDCADGTDEPGTSACPGGKFYCRN 90
Query: 88 LGSKPQFIFSSHVNDNFCDCCDGSDEYDGTIHCPNTCVMGGNSEYMIGNYNKKVSGFAE 146
G P ++FSS VND CDCCDG+DEYDG + CPNTC G + KK++ + E
Sbjct: 91 AGHSPVYLFSSRVNDGICDCCDGTDEYDGQVKCPNTCWEAG--KVARDRLKKKIATYQE 147
>Glyma12g19470.1
Length = 57
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 36 DEKYYGSEVIKCKDGSKSFSRDRINDNFCDCPDGTDEPGTSACPKGKFYCKNLG 89
D Y S VI+CKDGS F++ ++ND+FC+C DG DE GTSACP GKFYC+N+G
Sbjct: 2 DNYYKSSNVIRCKDGSGKFTKAQLNDDFCECADGIDELGTSACPGGKFYCQNVG 55
>Glyma08g36100.1
Length = 102
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 7/50 (14%)
Query: 47 CKDGSKSFSRDRINDNFCDCPDGTDEPG-------TSACPKGKFYCKNLG 89
CKDGS F++ ++ND+ CDC DGT+EPG T ACP KFYC+N G
Sbjct: 1 CKDGSGKFTKAQLNDDMCDCVDGTNEPGFYFNYEITMACPGEKFYCRNAG 50