Miyakogusa Predicted Gene

Lj0g3v0275659.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0275659.2 Non Chatacterized Hit- tr|Q69KN1|Q69KN1_ORYSJ
Putative SMA-9 class B OS=Oryza sativa subsp.
japonica,27.41,0.000004,seg,NULL,CUFF.18278.2
         (465 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g10880.1                                                        58   2e-08

>Glyma02g10880.1 
          Length = 877

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 3/124 (2%)

Query: 341 YVQTWEGSLAAKFQPNHVSLIKAQAFSKATPPFSLTLQWSSRLEISNFLPEKAVNYTKCS 400
           YV+ WEGSL+ + Q   V + K + +  ++   +L   W   ++I   + +  +N  K  
Sbjct: 567 YVKVWEGSLSGQRQGQPVFITKLEGYRNSSASETLAANWPPVMQIVRLISQDHMN-NKQY 625

Query: 401 LSRPVYYVFLNTLSKSNKLYEHLLSKKLCAKIDFSHQSLILSPTEKKYFFLGSVFPRGTT 460
           + +  + VF       +     L  KKLCA I    Q+L+LS ++K +  +G +FP    
Sbjct: 626 VGKADFLVFRAM--NPHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAFRLIGMLFPGDMV 683

Query: 461 FVEP 464
             +P
Sbjct: 684 VFKP 687