Miyakogusa Predicted Gene

Lj0g3v0275509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0275509.1 Non Chatacterized Hit- tr|A5APB2|A5APB2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,70.59,0.0000000000008,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,Rab3 GTPase-activating protein catalytic subunit;
Rab3-GT,CUFF.18283.1
         (376 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g29320.1                                                       652   0.0  
Glyma18g06600.1                                                       642   0.0  
Glyma02g46190.1                                                       121   1e-27
Glyma14g02550.1                                                       121   1e-27
Glyma08g43140.1                                                       113   4e-25
Glyma18g10700.1                                                       109   5e-24
Glyma08g26440.1                                                        54   2e-07

>Glyma11g29320.1 
          Length = 1011

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/377 (82%), Positives = 341/377 (90%), Gaps = 1/377 (0%)

Query: 1    MMLLKSYQSMHAPYTQEAPLMTEDMHEERLQAVEAFGDSFNFSAQLERDILNSDMSSFKA 60
            MMLLKS+QSMH PYTQE PLMTEDMHE+RL+AVEAFGDSF+FSAQLERDIL SDMS+FKA
Sbjct: 635  MMLLKSHQSMHVPYTQEVPLMTEDMHEDRLKAVEAFGDSFDFSAQLERDILTSDMSAFKA 694

Query: 61   ANPDATFEDFIRWHSPGDWEADNDSEVAGXXXXXALDINKSKDDWPPRGRLSKRMSEHGN 120
            ANPDA FEDFIRWHSPGDWE D+D E +      ALDI KSKD WPP+G+LSKRMSE GN
Sbjct: 695  ANPDAVFEDFIRWHSPGDWEEDDDPEGSKSSSSSALDIKKSKDSWPPQGQLSKRMSEQGN 754

Query: 121  LWRKIWDSAPSLPASEQKPLLDPNREGEKVLHYLETLQPHVLLEQMVCTAFRAAADTLSQ 180
            LWRK+W+SAP+LPASEQKPLLDPNREGEKVLHYLETLQPH LLEQMVCTAF+AAADTL Q
Sbjct: 755  LWRKLWNSAPALPASEQKPLLDPNREGEKVLHYLETLQPHELLEQMVCTAFKAAADTLCQ 814

Query: 181  TSYGELKQMDTKMQQLYLTIAPALRPLQVNRLSADSETIEDLRRLSVVFENVEKLLTLAA 240
            TSYGELKQ++T+MQQLYLT+A ALRPLQVN LS DSE +EDLRRL++ FE VEKLL LAA
Sbjct: 815  TSYGELKQVETEMQQLYLTMASALRPLQVNCLSGDSEIVEDLRRLTIAFEQVEKLLALAA 874

Query: 241  SLHRKLVRAPRLSRDIFSDYYSFYIPTMGTGLSEDI-EKEFDKKQVVKDREREVLSNMFV 299
            SLHRKL++APR+SR+IF++YY+FYI T G GL EDI EKEF+KKQ VKD EREVLSNMFV
Sbjct: 875  SLHRKLIQAPRVSREIFNNYYNFYIQTTGKGLIEDIGEKEFNKKQEVKDHEREVLSNMFV 934

Query: 300  PPTANQSWRKVLSMGNLLNGHEPILREIIFSLRDRWNGNHYAARGGSVSQQEIETYRMYI 359
            PPTANQSWRKVLSMGNLLNGHEPILREII SLRDR +GNHYAAR GSVSQQEIETYRMYI
Sbjct: 935  PPTANQSWRKVLSMGNLLNGHEPILREIILSLRDRVSGNHYAARSGSVSQQEIETYRMYI 994

Query: 360  CGTSNALRVALSVVSCD 376
            CGTSN LRVALSVVSCD
Sbjct: 995  CGTSNDLRVALSVVSCD 1011


>Glyma18g06600.1 
          Length = 903

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/377 (83%), Positives = 343/377 (90%), Gaps = 1/377 (0%)

Query: 1   MMLLKSYQSMHAPYTQEAPLMTEDMHEERLQAVEAFGDSFNFSAQLERDILNSDMSSFKA 60
           MMLLKS+QSMHAPYTQEAPLMTEDMHEERL+AVEAFGDSF+FSAQLERDIL SDMS+FKA
Sbjct: 527 MMLLKSHQSMHAPYTQEAPLMTEDMHEERLKAVEAFGDSFDFSAQLERDILTSDMSAFKA 586

Query: 61  ANPDATFEDFIRWHSPGDWEADNDSEVAGXXXXXALDINKSKDDWPPRGRLSKRMSEHGN 120
           ANP A FEDFIRWHSPGDWE D+  E +      + DI KSKD WPP+GRLSKRMSEHGN
Sbjct: 587 ANPGAIFEDFIRWHSPGDWEEDDGPEGSKSSSSSSHDIKKSKDSWPPQGRLSKRMSEHGN 646

Query: 121 LWRKIWDSAPSLPASEQKPLLDPNREGEKVLHYLETLQPHVLLEQMVCTAFRAAADTLSQ 180
           LWRK+W+SAP+LPASEQKPLLDPNREGEKVLHYLETLQPH LLEQMVC AFRAAADTL Q
Sbjct: 647 LWRKLWNSAPALPASEQKPLLDPNREGEKVLHYLETLQPHELLEQMVCAAFRAAADTLCQ 706

Query: 181 TSYGELKQMDTKMQQLYLTIAPALRPLQVNRLSADSETIEDLRRLSVVFENVEKLLTLAA 240
           TS+GELKQ++T+MQQLYLT+A ALR LQVN LS DSETIEDLRRL+V FE VEKLLTLAA
Sbjct: 707 TSFGELKQVETEMQQLYLTMASALRALQVNHLSGDSETIEDLRRLTVAFEQVEKLLTLAA 766

Query: 241 SLHRKLVRAPRLSRDIFSDYYSFYIPTMGTGLSEDI-EKEFDKKQVVKDREREVLSNMFV 299
           SLHRKL++APRLSR+IF+DY++FYI T G GL+EDI EKEF+KKQ V+D EREVLSNMFV
Sbjct: 767 SLHRKLIQAPRLSREIFNDYHNFYIQTKGKGLTEDIDEKEFNKKQEVRDHEREVLSNMFV 826

Query: 300 PPTANQSWRKVLSMGNLLNGHEPILREIIFSLRDRWNGNHYAARGGSVSQQEIETYRMYI 359
           PPTANQSWRKVLSMGNLLNGHEPILREIIFSLRDR +GNHYAAR GS+SQQEIETYRMYI
Sbjct: 827 PPTANQSWRKVLSMGNLLNGHEPILREIIFSLRDRVSGNHYAARSGSISQQEIETYRMYI 886

Query: 360 CGTSNALRVALSVVSCD 376
           CGTSN LRVALSVVSCD
Sbjct: 887 CGTSNDLRVALSVVSCD 903


>Glyma02g46190.1 
          Length = 696

 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/240 (35%), Positives = 126/240 (52%), Gaps = 30/240 (12%)

Query: 1   MMLLKSYQSMHAPYTQEAPLMTEDMHEERLQAVEAFGDSFNFSAQLERDILNSDMSSFKA 60
           M LL++ + +++P TQE PL+TED+  E  + V   G      +QL      SDM +FKA
Sbjct: 386 MTLLETGEPVYSPITQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLL-----SDMQAFKA 440

Query: 61  ANPDATFEDFIRWHSPGDWEADNDSEVAGXXXXXALDINKSKDDWPPRGRLSKRMSEHGN 120
           ANP    EDF+RW+SP DW  DN++           D+  S +    RG+LS+RM + GN
Sbjct: 441 ANPGCILEDFVRWYSPPDW-TDNEASTEDS------DVFDSGEPLSTRGQLSQRMQKEGN 493

Query: 121 LWRKIWDSAPSLPASEQKPLLDPNREGEKVLHYLETLQPHVLLEQMVCT----AFRAAAD 176
           LWR++W+++  +PA +Q PL D +   E +L+  E + P  L  Q+  +     F  A  
Sbjct: 494 LWRELWETSKPVPAVKQAPLFDEDLALEGILNAFEDIHPSDLFGQLFVSLLGLGFAIAEP 553

Query: 177 TLSQTSYGELKQMDTKMQQLYLTIAPALRPLQVNRLSADSETIEDLRRLSVVFENVEKLL 236
            LS  S       D K    Y+ +A      Q N+L   +E ++DL +   V+E VEK+L
Sbjct: 554 MLSSNSDFSKLFYDCKE---YIIVA-----CQNNKL---NEKVDDLVQ---VYETVEKML 599


>Glyma14g02550.1 
          Length = 697

 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 124/240 (51%), Gaps = 30/240 (12%)

Query: 1   MMLLKSYQSMHAPYTQEAPLMTEDMHEERLQAVEAFGDSFNFSAQLERDILNSDMSSFKA 60
           M LL++ + +++P TQE PL+TED+  E  + V   G      +QL      SDM +FKA
Sbjct: 387 MTLLETGEPVYSPITQEGPLLTEDLIRETEEFVLRTGSVGAGCSQL-----LSDMQAFKA 441

Query: 61  ANPDATFEDFIRWHSPGDWEADNDSEVAGXXXXXALDINKSKDDWPPRGRLSKRMSEHGN 120
           ANP    EDF+RWHSP DW  DN++           D+  S +    RG+LS+RM + GN
Sbjct: 442 ANPGCILEDFVRWHSPPDW-TDNEASTEDS------DVFDSGEPLSARGQLSRRMQKEGN 494

Query: 121 LWRKIWDSAPSLPASEQKPLLDPNREGEKVLHYLETLQPHVLLEQMVCT----AFRAAAD 176
           LWR++W+++  +PA +Q PL D +   E +L+  E + P  L  Q+  +     F  A  
Sbjct: 495 LWRELWETSKPVPAVKQAPLFDEDLAVEGILNAFEEMHPSDLFGQLFVSLLGLGFGIAEP 554

Query: 177 TLSQTSYGELKQMDTKMQQLYLTIAPALRPLQVNRLSADSETIEDLRRLSVVFENVEKLL 236
            LS  S  +  ++    ++  +T        Q N+L+      E +  L  V+E VEK+L
Sbjct: 555 MLSGNS--DFSKLFYDCKEYIITAC------QNNKLN------EKVDGLVQVYETVEKML 600


>Glyma08g43140.1 
          Length = 627

 Score =  113 bits (282), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 121/238 (50%), Gaps = 26/238 (10%)

Query: 1   MMLLKSYQSMHAPYTQEAPLMTEDMHEERLQAVEAFGDSFNFSAQLERDILNSDMSSFKA 60
           + LL++ +  ++P TQE PL+TED+ +E  + V   G      +QL      SDM +FKA
Sbjct: 308 LTLLETGEPAYSPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQL-----LSDMQAFKA 362

Query: 61  ANPDATFEDFIRWHSPGDWEADNDSEVAGXXXXXALDINKSKDDWPPRGRLSKRMSEHGN 120
           ANP    EDF+RW+SP DW     SE  G       D +   +    RG+LS RM + GN
Sbjct: 363 ANPGCILEDFVRWYSPPDW-----SESEGSTEDR--DSSYGGESMSTRGQLSLRMQKEGN 415

Query: 121 LWRKIWDSAPSLPASEQKPLLDPNREGEKVLHYLETLQPHVLLEQMVCTAFRAAADTLSQ 180
           LWR++W+++  +PA +Q PL D +   E +L   E +QP  L  Q+  +           
Sbjct: 416 LWRELWETSKPVPAVKQAPLYDEDLAVEDILDAFEDIQPSELFGQLFVSLLSFGFAIAET 475

Query: 181 TSYG--ELKQMDTKMQQLYLTIAPALRPLQVNRLSADSETIEDLRRLSVVFENVEKLL 236
             YG  +L ++    ++  +T        Q +R    +E I++L ++   +E VEK+L
Sbjct: 476 MLYGDLDLSKLFNDCKEYIVTTC------QSDRF---NEKIDELVQM---YETVEKML 521


>Glyma18g10700.1 
          Length = 374

 Score =  109 bits (273), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 24/175 (13%)

Query: 1   MMLLKSYQSMHAPYTQEAPLMTEDMHEERLQAVEAFGDSFNFSAQLERDILNSDMSSFKA 60
           + LL++ +  ++P TQE PL+TED+ +E  + V   G      +QL      SDM +FKA
Sbjct: 47  LTLLETGEPAYSPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQL-----LSDMQAFKA 101

Query: 61  ANPDATFEDFIRWHSPGDW------EADNDSEVAGXXXXXALDINKSKDDWPPRGRLSKR 114
           ANP    EDF+RW+SP DW        D DS   G                  RG+LS R
Sbjct: 102 ANPGCILEDFVRWYSPPDWMESEGSTEDRDSFYGGESMSS-------------RGQLSLR 148

Query: 115 MSEHGNLWRKIWDSAPSLPASEQKPLLDPNREGEKVLHYLETLQPHVLLEQMVCT 169
           M + GNLWR++W+++ S+PA +Q PL D +   E +L   E +QP  L  Q+  +
Sbjct: 149 MQKEGNLWRELWETSKSVPAVKQTPLYDEDLAVEGILDAFEDIQPSELYRQLFVS 203


>Glyma08g26440.1 
          Length = 58

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/36 (63%), Positives = 25/36 (69%)

Query: 54 DMSSFKAANPDATFEDFIRWHSPGDWEADNDSEVAG 89
          DM +FKA N D  FEDFIRWHS  DWE D+D E  G
Sbjct: 4  DMLAFKATNLDVAFEDFIRWHSTRDWEEDDDLEGIG 39