Miyakogusa Predicted Gene

Lj0g3v0275389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0275389.1 tr|G7IMM8|G7IMM8_MEDTR Wall-associated receptor
kinase-like protein OS=Medicago truncatula
GN=MTR_2g,44.19,0.0000000001, ,CUFF.18252.1
         (90 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g03160.1                                                        68   2e-12
Glyma09g03170.1                                                        55   2e-08
Glyma09g03230.1                                                        53   6e-08

>Glyma09g03160.1 
          Length = 685

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 14/84 (16%)

Query: 7   CHGKYCCETSLPTHFAEYNATMENLISMNHAMRSSNQCSYAVIASLQSYYEYWNDGYAYQ 66
           CHG+YCCETSLP + +EYNAT+++  + N ++  S+QCS A I +     +YW+  Y   
Sbjct: 144 CHGRYCCETSLPNYLSEYNATLQDFNNQNSSVE-SHQCSSAFIVN-----KYWSQRYYMP 197

Query: 67  YDDSSIVREMKHLHHVPAVLEWEI 90
           +        + ++ +V AVLEWEI
Sbjct: 198 H--------LNNMDYVDAVLEWEI 213


>Glyma09g03170.1 
          Length = 282

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 5   TNCHGKYCCETSLPTHFAEYNATMENL-ISMNHAMRSSNQCSYAVIASLQSYYEYWNDGY 63
           ++C G YCCETSLP + + YN + E + +  N     SN   Y +I +  S ++Y  D Y
Sbjct: 125 SSCRGSYCCETSLPPYLSAYNISTETVEVKSNIKAECSN---YLLIRAEYSNFKYVYDEY 181

Query: 64  AYQYDDSSIVREMKHLHHVPAVLEWEI 90
              Y    I+ ++K    VPAVLEWEI
Sbjct: 182 NSSY-WVPILGDLKKQKDVPAVLEWEI 207


>Glyma09g03230.1 
          Length = 672

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 5   TNCHGKYCCETSLPTHFAEYNATMENL-ISMNHAMRSSNQCSYAVIASLQSYYEYWNDGY 63
           ++C G YCCETSLP + + YN + E + +  N     SN   Y +I +  S ++Y  D Y
Sbjct: 129 SSCRGSYCCETSLPPYLSAYNISTETVEVKSNIKAECSN---YLLIRAEYSNFKYEYDEY 185

Query: 64  AYQYDDSSIVREMKHLHHVPAVLEWEI 90
              Y   ++  ++K    VPAVLEWEI
Sbjct: 186 NSSYWVPTL-GDLKKQKDVPAVLEWEI 211