Miyakogusa Predicted Gene

Lj0g3v0275259.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0275259.2 Non Chatacterized Hit- tr|B8LQP4|B8LQP4_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,54.23,0.000000000000001,TIFACTORIIB,Transcription factor TFIIB;
TRANSCRIPTION FACTOR IIIB,NULL; TRANSCRIPTION INITIATION
FAC,CUFF.18250.2
         (556 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g03970.1                                                       509   e-144
Glyma19g29580.1                                                       352   7e-97
Glyma19g29580.2                                                       341   2e-93

>Glyma16g03970.1 
          Length = 655

 Score =  509 bits (1312), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 301/645 (46%), Positives = 357/645 (55%), Gaps = 144/645 (22%)

Query: 1   MVFCDHCAKNVPGVRVSDGPLCCNECGKVLEEFYFSEEPTFEKTSDGQSK---------- 50
           MV+C HCAKNV G R+ DG LCC  CG+VLE+++F+EEP+F K + GQ K          
Sbjct: 1   MVYCSHCAKNVAGERLDDGFLCCGSCGRVLEDYFFAEEPSFVKNAAGQGKVEDPNSPKVI 60

Query: 51  ----------------------------LSGRYVRTIQSEYSASRQRTLDRAYDEIKYLS 82
                                       L G YVRT+QSEYS SRQRTLDRAYDEIKYLS
Sbjct: 61  YSTLLTCAKDIIVAHYLLLLSMENIIKALIGNYVRTVQSEYSESRQRTLDRAYDEIKYLS 120

Query: 83  YNLGVDDDNVANQALAFYRIGLEKNFTKGRKSEQVQAACLYIAFRENNKPYLLIDFSNYL 142
           + LGV+D+++A QAL FY+I LE+NFT+GRKSEQV AACLYIAFR               
Sbjct: 121 FGLGVNDEHMAEQALTFYKIALERNFTRGRKSEQVHAACLYIAFR--------------- 165

Query: 143 RTNVYVLGAVFLQLCKLLRLEEHPIVQKPVDPSLFIYKYTISLLNHRNIHVSETALNIIA 202
               YVLGAVFLQLC++LRL EHPIVQKPVDPSLFI++YT +LL   +  VS+TAL I+A
Sbjct: 166 ----YVLGAVFLQLCQVLRLGEHPIVQKPVDPSLFIHRYTKNLLKRGSKAVSDTALAIVA 221

Query: 203 SMKRDWMQTGRKPSGLCGAALYVSALAHGCKKSKSEIQRIVHVCEATLTKRLVEFENTES 262
           SMKRDWMQTGRKPSGLCGAALY+SALAHG K SK +I                       
Sbjct: 222 SMKRDWMQTGRKPSGLCGAALYISALAHGIKCSKPDI----------------------- 258

Query: 263 ASLTIEELNTMAKELEKNPIQIPNGKLSKCTSKDLLCEHKA-SDAAYFALGLCETCYKDF 321
               +EELNTMAKE EKNP  +P G L  C SKDLLCEHK  S   +FALGLCE CYKDF
Sbjct: 259 ----VEELNTMAKEHEKNPTIMPEGGLKGCISKDLLCEHKEDSGVTHFALGLCEACYKDF 314

Query: 322 DKXXXXXXXXXDPPAFQRSERERVAKLHSEESANKSDDLVRATNGACESRQDKIHVSQPE 381
           DK         DPPAFQR+ERER+ K   EES +++  L  A+N   +S ++ +    PE
Sbjct: 315 DKLSGGLGGGLDPPAFQRAERERLKKTLPEESVDEACALANASNDQFKSHKEDLPAYVPE 374

Query: 382 SIGAN-EQLATENGEHDESHREDDMNAKTAXXXXXXXXXXXXXXXGYLHSEQEKHFKKII 440
           SIGAN E  AT++G++D+SHRED+    +                 Y+H E+ KH KKI+
Sbjct: 375 SIGANVEHEATKDGKYDDSHREDESETLSDIDDEEVDL--------YIHDEEGKHIKKIL 426

Query: 441 WEKMNREYLEEQXXXXXXXXXXXXXXXXXXXXCSEDLLXXXXXXXXXXXXXXXXRKEMKQ 500
           WE  NREYLEEQ                    CSED+L                RKEM+Q
Sbjct: 427 WETANREYLEEQAAKEAAAAANKKAFEAKFENCSEDILAARELAASSIEAVAKSRKEMRQ 486

Query: 501 KRAEEAKNLGPPQSAAEAAKQMLRTKR--------------------------------- 527
           KRA EAKN  P QSAAEA  QM   KR                                 
Sbjct: 487 KRAYEAKNTRPAQSAAEAFGQMSNKKRGMLMCDWLDCCWVGAWVTWPVRADGMFDQHGSA 546

Query: 528 -----------LSSKVNYDRVQSLFDEPVAPENP------KKVRF 555
                      L SKVN++ +  LFDE    EN       KKVRF
Sbjct: 547 QSTVRWVNLQGLKSKVNFELLNELFDEMDTQENTDGLKKQKKVRF 591


>Glyma19g29580.1 
          Length = 483

 Score =  352 bits (902), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 202/384 (52%), Positives = 241/384 (62%), Gaps = 17/384 (4%)

Query: 181 YTISLLNHRNIHVSETALNIIASMKRDWMQTGRKPSGLCGAALYVSALAHGCKKSKSEIQ 240
           +   LL   +  VS+TAL I+ASMKRDWMQTGRKPSGLCGAALY+SALAHG K SK +I 
Sbjct: 44  FDPDLLKRGSKAVSDTALAIVASMKRDWMQTGRKPSGLCGAALYISALAHGIKCSKPDIL 103

Query: 241 RIVHVCEATLTKRLVEFENTESASLTIEELNTMAKELEKNPIQIPNGKLSKCTSKDLLCE 300
           +IVHVCEATLTKRLVEFE+TES+SLT+EELNTMAKE EKN + +P G L  C SKDLLCE
Sbjct: 104 KIVHVCEATLTKRLVEFEDTESSSLTVEELNTMAKEHEKNSMIMPGGGLKGCISKDLLCE 163

Query: 301 HKA-SDAAYFALGLCETCYKDFDKXXXXXXXXXDPPAFQRSERERVAKLHSEESANKSDD 359
           HK  S   +FALGLCE CYKDFDK         DPPAFQR+ERER  K   EES +++  
Sbjct: 164 HKEDSGVTHFALGLCEACYKDFDKLSGGLGGGLDPPAFQRAERERFKKTLPEESVDEACA 223

Query: 360 LVRATNGACESRQDKIHVSQPESIGAN-EQLATENGEHDESHREDDMNAKTAXXXXXXXX 418
           L  A+N   +S ++ +H   PESIGAN E  AT++G++D+SHRED+    +         
Sbjct: 224 LANASNDQFKSHKEDLHAYVPESIGANVEHEATKDGKYDDSHREDESETLSDIDDEEVDL 283

Query: 419 XXXXXXXGYLHSEQEKHFKKIIWEKMNREYLEEQXXXXXXXXXXXXXXXXXXXXCSEDLL 478
                   Y+H E+ KH KK++WE  NREYLEEQ                    CSEDLL
Sbjct: 284 --------YIHDEEGKHIKKLLWETANREYLEEQAAKEAAAAANKKAFEANFENCSEDLL 335

Query: 479 XXXXXXXXXXXXXXXXRKEMKQKRAEEAKNLGPPQSAAEAAKQMLRTKR----LSSKVNY 534
                           RKEM+QKRA EAKN  P QSAAEA  QM   KR    L SKVN+
Sbjct: 336 AARELAASSAEAVAKSRKEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNLQGLKSKVNF 395

Query: 535 DRVQSLFDEPVAPEN---PKKVRF 555
           + +  LFDE    ++   PKKVRF
Sbjct: 396 ELLNELFDEMENTDDLKKPKKVRF 419


>Glyma19g29580.2 
          Length = 481

 Score =  341 bits (874), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 197/383 (51%), Positives = 236/383 (61%), Gaps = 17/383 (4%)

Query: 181 YTISLLNHRNIHVSETALNIIASMKRDWMQTGRKPSGLCGAALYVSALAHGCKKSKSEIQ 240
           +   LL   +  VS+TAL I+ASMKRDWMQTGRKPSGLCGAALY+SALAHG K SK +I 
Sbjct: 44  FDPDLLKRGSKAVSDTALAIVASMKRDWMQTGRKPSGLCGAALYISALAHGIKCSKPDIL 103

Query: 241 RIVHVCEATLTKRLVEFENTESASLTIEELNTMAKELEKNPIQIPNGKLSKCTSKDLLCE 300
           +IVHVCEATLTKRLVEFE+TES+SLT+EELNTMAKE EKN + +P G L  C SKDLLCE
Sbjct: 104 KIVHVCEATLTKRLVEFEDTESSSLTVEELNTMAKEHEKNSMIMPGGGLKGCISKDLLCE 163

Query: 301 HKA-SDAAYFALGLCETCYKDFDKXXXXXXXXXDPPAFQRSERERVAKLHSEESANKSDD 359
           HK  S   +FALGLCE CYKDFDK         DPPAFQR+ERER  K   EES +++  
Sbjct: 164 HKEDSGVTHFALGLCEACYKDFDKLSGGLGGGLDPPAFQRAERERFKKTLPEESVDEACA 223

Query: 360 LVRATNGACESRQDKIHVSQPESIGANEQLATENGEHDESHREDDMNAKTAXXXXXXXXX 419
           L  A+N   +S ++ +H   PE     E  AT++G++D+SHRED+    +          
Sbjct: 224 LANASNDQFKSHKEDLHAYVPERANV-EHEATKDGKYDDSHREDESETLSDIDDEEVDL- 281

Query: 420 XXXXXXGYLHSEQEKHFKKIIWEKMNREYLEEQXXXXXXXXXXXXXXXXXXXXCSEDLLX 479
                  Y+H E+ KH KK++WE  NREYLEEQ                    CSEDLL 
Sbjct: 282 -------YIHDEEGKHIKKLLWETANREYLEEQAAKEAAAAANKKAFEANFENCSEDLLA 334

Query: 480 XXXXXXXXXXXXXXXRKEMKQKRAEEAKNLGPPQSAAEAAKQMLRTKR----LSSKVNYD 535
                          RKEM+QKRA EAKN  P QSAAEA  QM   KR    L SKVN++
Sbjct: 335 ARELAASSAEAVAKSRKEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNLQGLKSKVNFE 394

Query: 536 RVQSLFDEPVAPEN---PKKVRF 555
            +  LFDE    ++   PKKVRF
Sbjct: 395 LLNELFDEMENTDDLKKPKKVRF 417