Miyakogusa Predicted Gene

Lj0g3v0275139.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0275139.1 Non Chatacterized Hit- tr|I1MZC4|I1MZC4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,58.54,2e-17,seg,NULL; XH,Uncharacterised domain XH; TRANSCRIPTION
FACTOR X1-LIKE,NULL; RIBONUCLEASE P PROTEIN SU,gene.g21395.t1.1
         (307 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g04290.1                                                        95   9e-20
Glyma08g36280.1                                                        85   9e-17
Glyma18g04320.1                                                        81   2e-15
Glyma11g34010.3                                                        80   3e-15
Glyma11g34010.2                                                        80   3e-15
Glyma11g34010.1                                                        80   3e-15
Glyma16g12130.1                                                        79   7e-15
Glyma02g41580.1                                                        77   3e-14
Glyma02g06000.1                                                        71   2e-12
Glyma15g04250.1                                                        70   2e-12
Glyma13g41150.1                                                        68   1e-11
Glyma11g34020.1                                                        63   4e-10
Glyma08g23240.2                                                        62   5e-10
Glyma08g23240.1                                                        62   5e-10
Glyma18g04280.1                                                        62   7e-10
Glyma07g02740.2                                                        59   5e-09
Glyma07g02740.1                                                        59   5e-09
Glyma18g04310.1                                                        56   5e-08

>Glyma18g04290.1 
          Length = 388

 Score = 95.1 bits (235), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 48/82 (58%), Positives = 63/82 (76%), Gaps = 1/82 (1%)

Query: 209 EIVCD-DEKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLEEG 267
           EI+ D D +LK+L+KE+   A  AVV A  EMN++NPSGRF+V ELWN+   R+ATLEEG
Sbjct: 305 EIINDEDGRLKRLKKEMGVGAYKAVVAALIEMNEYNPSGRFMVRELWNNEEDRRATLEEG 364

Query: 268 VEFLLSQWKTKKRKIHQTGTDD 289
           +EF+L+Q KTK+RKIHQ   D+
Sbjct: 365 IEFVLNQTKTKRRKIHQMVDDE 386



 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 46/140 (32%)

Query: 121 YLNDLQQKSFNEEIRKLAAMKQQNEHKSVLKLVEDLKDKNEKLNAKIVELEKPPNLLQE- 179
           YL  L +  F   + K+ A+K + ++ +V  L ++LK +NE+LNAK+++LEK    +QE 
Sbjct: 70  YLFYLFKSLF---LTKVVALKLKKDN-NVSALDKELKVENERLNAKVIQLEKQLESIQEL 125

Query: 180 -----------------------------------------SEDFNQSLIIKERESNDEL 198
                                                    SEDFNQSLIIKERE NDEL
Sbjct: 126 ELENQQLKEKLDVMKHMEDEFLNMVGALHMNVVEKERSLRDSEDFNQSLIIKEREINDEL 185

Query: 199 QKARKRMIEEEIVCDDEKLK 218
           QKARK +I+  I   D  L+
Sbjct: 186 QKARKTLIKVRIFFYDIYLR 205


>Glyma08g36280.1 
          Length = 641

 Score = 85.1 bits (209), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 58/76 (76%), Gaps = 1/76 (1%)

Query: 207 EEEIVCDD-EKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLE 265
           E+EI+ DD EKL +L+ ++   A  AVVQA  E+N+HNPSGR++ S +WN+  KR+ATL+
Sbjct: 562 EKEIIRDDDEKLNELKNDLGEGAYKAVVQALLEINEHNPSGRYLTSVVWNYKEKRRATLK 621

Query: 266 EGVEFLLSQWKTKKRK 281
           EGV FLL+QW  +KRK
Sbjct: 622 EGVHFLLNQWIVRKRK 637


>Glyma18g04320.1 
          Length = 657

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%)

Query: 207 EEEIVCDD-EKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLE 265
           E+EI+ DD EKL  L+ ++   A  AVV+A  E+N+HNPSGR++ S LWN+   R+ATL+
Sbjct: 578 EKEIIRDDDEKLNGLKNDLGEGAYKAVVEALLEINEHNPSGRYLTSVLWNYKQGRRATLK 637

Query: 266 EGVEFLLSQWKTKKRK 281
           EGV+FL +QWK  KRK
Sbjct: 638 EGVQFLSNQWKVLKRK 653


>Glyma11g34010.3 
          Length = 640

 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 56/76 (73%), Gaps = 1/76 (1%)

Query: 207 EEEIVCDD-EKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLE 265
           E+EI+ DD EKL  L+ ++   A  AVV+A  E+N+HNPSGR++ S LWN+   R+ATL+
Sbjct: 561 EKEIIRDDDEKLNGLKNDLGEGAYKAVVEALLEINEHNPSGRYLTSVLWNYKQGRRATLK 620

Query: 266 EGVEFLLSQWKTKKRK 281
           EGV+F+ +QWK  KRK
Sbjct: 621 EGVQFISNQWKVLKRK 636


>Glyma11g34010.2 
          Length = 640

 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 56/76 (73%), Gaps = 1/76 (1%)

Query: 207 EEEIVCDD-EKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLE 265
           E+EI+ DD EKL  L+ ++   A  AVV+A  E+N+HNPSGR++ S LWN+   R+ATL+
Sbjct: 561 EKEIIRDDDEKLNGLKNDLGEGAYKAVVEALLEINEHNPSGRYLTSVLWNYKQGRRATLK 620

Query: 266 EGVEFLLSQWKTKKRK 281
           EGV+F+ +QWK  KRK
Sbjct: 621 EGVQFISNQWKVLKRK 636


>Glyma11g34010.1 
          Length = 640

 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 56/76 (73%), Gaps = 1/76 (1%)

Query: 207 EEEIVCDD-EKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLE 265
           E+EI+ DD EKL  L+ ++   A  AVV+A  E+N+HNPSGR++ S LWN+   R+ATL+
Sbjct: 561 EKEIIRDDDEKLNGLKNDLGEGAYKAVVEALLEINEHNPSGRYLTSVLWNYKQGRRATLK 620

Query: 266 EGVEFLLSQWKTKKRK 281
           EGV+F+ +QWK  KRK
Sbjct: 621 EGVQFISNQWKVLKRK 636


>Glyma16g12130.1 
          Length = 161

 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 63/100 (63%), Gaps = 4/100 (4%)

Query: 186 SLIIKERESNDELQKARKRMIEEEIVCDDEKLKQLRKEVSFEAQWAVVQAWKEMNDHNPS 245
           SL +  R SN  L  +   +I +    DDEKL +L  ++   A  A+VQA  E+N+HNP+
Sbjct: 66  SLTVLTRNSNTPLAISLTEIIRD----DDEKLNELINDLGEGAYKAMVQALSEINEHNPN 121

Query: 246 GRFVVSELWNHGMKRKATLEEGVEFLLSQWKTKKRKIHQT 285
            +++ S LWN+   R+ATL+EGV+FLL+QW  +KRK   T
Sbjct: 122 DQYLTSVLWNYKEGRRATLKEGVQFLLNQWIVRKRKRGMT 161


>Glyma02g41580.1 
          Length = 899

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 53/75 (70%), Gaps = 1/75 (1%)

Query: 208 EEIVCD-DEKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLEE 266
           +EI+ D DEKLK L+ E+      AVV A  E+N +NPSGR++ SELWN+   ++ATL+E
Sbjct: 821 QEIIDDEDEKLKGLKNEMGEGVYKAVVTALTEINTYNPSGRYITSELWNYEEGKRATLQE 880

Query: 267 GVEFLLSQWKTKKRK 281
           GV+ LL QWK  K+K
Sbjct: 881 GVKLLLMQWKLTKQK 895


>Glyma02g06000.1 
          Length = 414

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 50/69 (72%), Gaps = 1/69 (1%)

Query: 213 DDEKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLEEGVEFLL 272
           DDE L +L+ ++   A  AVVQA  E+N+HNPSGR++ S +WN+   R+A+L+E V+FLL
Sbjct: 343 DDEMLNELKNDLGEGAYKAVVQALSEVNEHNPSGRYLTSVVWNYKEGRRASLKE-VQFLL 401

Query: 273 SQWKTKKRK 281
           + WK  KRK
Sbjct: 402 NHWKVLKRK 410


>Glyma15g04250.1 
          Length = 626

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 48/69 (69%)

Query: 213 DDEKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLEEGVEFLL 272
           +DEKL+ L+ E   +   AVV A KE+N+ NPSGR+ + ELW+    RKA+L+EG  +++
Sbjct: 557 EDEKLRTLKDEFGDDVFQAVVTALKELNEFNPSGRYPLRELWHSKEGRKASLKEGCSYII 616

Query: 273 SQWKTKKRK 281
            QWKT KRK
Sbjct: 617 KQWKTLKRK 625


>Glyma13g41150.1 
          Length = 640

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 47/69 (68%)

Query: 213 DDEKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLEEGVEFLL 272
           +DEKL+ L+ E   +   AVV A KE+N++NPSGR+ + ELW+    RKA L+EG  F++
Sbjct: 570 EDEKLRTLKDEFGDDVFQAVVTALKELNEYNPSGRYPLPELWHSKEGRKALLKEGCSFII 629

Query: 273 SQWKTKKRK 281
            QWK  K++
Sbjct: 630 RQWKALKQR 638


>Glyma11g34020.1 
          Length = 346

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 7/62 (11%)

Query: 232 VVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLEEGVEFL-------LSQWKTKKRKIHQ 284
           +V+A KE+N++NPSGRF ++ELWN    R+ATLEEG +F+       +   KTK++KI+Q
Sbjct: 285 LVRALKEINEYNPSGRFTITELWNKVEGRRATLEEGNQFIRERSRVPIESKKTKQKKIYQ 344

Query: 285 TG 286
            G
Sbjct: 345 KG 346



 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)

Query: 169 ELEKPPNLLQESEDFNQSLIIKERESNDELQKARKRMIE 207
           E+EK   LL++ E+FNQSLIIK+ ESNDELQK RK++IE
Sbjct: 156 EIEKE-GLLKDLEEFNQSLIIKQHESNDELQKTRKKLIE 193


>Glyma08g23240.2 
          Length = 629

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 46/69 (66%)

Query: 213 DDEKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLEEGVEFLL 272
           +DEKL+ L++E   E   AVV A KE+N++N SG + V ELWN   KRKATL+E + +++
Sbjct: 559 EDEKLRSLKQEWGDEIYSAVVTALKEINEYNASGGYTVKELWNFKEKRKATLKEVINYIM 618

Query: 273 SQWKTKKRK 281
              K  KRK
Sbjct: 619 DHIKPLKRK 627


>Glyma08g23240.1 
          Length = 629

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 46/69 (66%)

Query: 213 DDEKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLEEGVEFLL 272
           +DEKL+ L++E   E   AVV A KE+N++N SG + V ELWN   KRKATL+E + +++
Sbjct: 559 EDEKLRSLKQEWGDEIYSAVVTALKEINEYNASGGYTVKELWNFKEKRKATLKEVINYIM 618

Query: 273 SQWKTKKRK 281
              K  KRK
Sbjct: 619 DHIKPLKRK 627


>Glyma18g04280.1 
          Length = 225

 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 27/115 (23%)

Query: 118 DSKYLNDLQQKSFNEEIRK--LAAMKQQNEHKSVLKLVEDLKDKNEKLNAKIVELE---- 171
           +SK LND+ QK   EE R   L    QQ + K+ +KL E+L+ +N+KLN+K+V+LE    
Sbjct: 32  ESKNLNDVLQKKLTEEKRSSWLEWENQQLKGKA-MKLQEELQVQNQKLNSKVVQLENQIQ 90

Query: 172 -----------------KP---PNLLQESEDFNQSLIIKERESNDELQKARKRMI 206
                            +P      L+++EDF+QSLII ERE NDELQKARK++I
Sbjct: 91  CNQKLELENQQLKGKLARPMEKDGSLKDAEDFSQSLIIIERERNDELQKARKKLI 145


>Glyma07g02740.2 
          Length = 629

 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 44/69 (63%)

Query: 213 DDEKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLEEGVEFLL 272
           +DEKL+ L+ E   E   AVV A KE+N++N SG + V ELWN    RKATL+E + +++
Sbjct: 559 EDEKLRSLKHEWGDEIYSAVVTALKEINEYNASGGYTVVELWNFKDNRKATLKEVINYIM 618

Query: 273 SQWKTKKRK 281
              K  KRK
Sbjct: 619 EHIKPLKRK 627


>Glyma07g02740.1 
          Length = 629

 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 44/69 (63%)

Query: 213 DDEKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATLEEGVEFLL 272
           +DEKL+ L+ E   E   AVV A KE+N++N SG + V ELWN    RKATL+E + +++
Sbjct: 559 EDEKLRSLKHEWGDEIYSAVVTALKEINEYNASGGYTVVELWNFKDNRKATLKEVINYIM 618

Query: 273 SQWKTKKRK 281
              K  KRK
Sbjct: 619 EHIKPLKRK 627


>Glyma18g04310.1 
          Length = 247

 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 48/77 (62%)

Query: 205 MIEEEIVCDDEKLKQLRKEVSFEAQWAVVQAWKEMNDHNPSGRFVVSELWNHGMKRKATL 264
           +++E +  +DEKLK LR E       AV  A  E+ ++N SGR+ ++E+WN    RKATL
Sbjct: 169 ILQETLDENDEKLKGLRSECGEAVYQAVTNALMEIEEYNSSGRYAIAEIWNWKEGRKATL 228

Query: 265 EEGVEFLLSQWKTKKRK 281
           +E V+ ++ Q  + KRK
Sbjct: 229 KEIVQHIIRQLNSHKRK 245