Miyakogusa Predicted Gene

Lj0g3v0275109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0275109.1 Non Chatacterized Hit- tr|E9CB76|E9CB76_CAPO3
Putative uncharacterized protein OS=Capsaspora
owczarz,26.64,5e-17,RIBONUCLEASE P/MRP SUBUNIT,NULL; POP1,Ribonuclease
P/MRP, subunit POP1,CUFF.18236.1
         (342 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g29980.1                                                       515   e-146
Glyma16g07720.1                                                       512   e-145
Glyma13g06030.1                                                       368   e-102
Glyma16g00200.1                                                       344   7e-95
Glyma09g00200.1                                                       336   2e-92
Glyma17g00200.1                                                       327   1e-89
Glyma05g33480.1                                                       313   1e-85
Glyma16g34860.1                                                       285   4e-77
Glyma0048s00200.1                                                     169   4e-42

>Glyma15g29980.1 
          Length = 840

 Score =  515 bits (1326), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/344 (75%), Positives = 291/344 (84%), Gaps = 4/344 (1%)

Query: 1   MLTEGTRKPQGSVPIPP---RKINVQKYAKSRGPELLSLQSIVENRLNNNYSSQRNKRRR 57
           M+T+GT+KPQ SVP PP   RKINVQKYA+SR  EL SLQSI+ENR+N++Y SQRNKRRR
Sbjct: 1   MVTDGTKKPQVSVPTPPPPPRKINVQKYAESRALELQSLQSIIENRVNSDYRSQRNKRRR 60

Query: 58  TTAFDSQIARKGGNRKRQKLGAVDKAHDESVLEKDQLKKLPRHIRRRYELKMNPENGFCT 117
           TTAFD+QIARKG  RKRQKLG +DKA  ES LE++ LKKLPR +RRRYELK NPENGFCT
Sbjct: 61  TTAFDNQIARKGCRRKRQKLGIIDKALAESGLEENHLKKLPRCVRRRYELKKNPENGFCT 120

Query: 118 SGDGTKRLRTHVWHAKRFAMTKLWGYNLPLGFQGRGKGSRAVLKRFKEGVLLHDSSYYTA 177
           SGDGTKRLRTHVWHAKRFAMTKLWGY+LPL  QGRGKGSRA+LKR K+GVL+HD+SYYTA
Sbjct: 121 SGDGTKRLRTHVWHAKRFAMTKLWGYHLPLCLQGRGKGSRALLKRLKQGVLVHDASYYTA 180

Query: 178 VQLEGPEDSLVSVLRMVLLP-SLETETPGNHDFSVLSGITYGTAMLYQVGAPVSQPIAPV 236
           VQLEGPEDSL+SVLRMVL P    T  PGNHD SVL  +TYG AML+Q GAPVSQPIAPV
Sbjct: 181 VQLEGPEDSLMSVLRMVLEPYPATTPHPGNHDDSVLYSVTYGKAMLHQCGAPVSQPIAPV 240

Query: 237 TYIWRPTFPQNKSTELDGRNHHTSSSQHDINDNSSNHDADLCEKSDVMKCGSSFRHIWVW 296
           TY+W+P+  QN STELDGRNH TS  QHDI ++S+ H  +L EKS  MK GSSFR +WVW
Sbjct: 241 TYMWQPSSQQNMSTELDGRNHCTSFGQHDIGNDSNKHGVELSEKSGKMKHGSSFRCLWVW 300

Query: 297 IHASAFEEGYDSLKFACQKEMEKSGVLINCLSLEGQLGKLELMG 340
           IHASAFEEGYD+LK ACQKEMEK G+ INC SLEGQL KLEL+G
Sbjct: 301 IHASAFEEGYDNLKIACQKEMEKGGISINCFSLEGQLAKLELIG 344


>Glyma16g07720.1 
          Length = 885

 Score =  512 bits (1318), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 256/343 (74%), Positives = 290/343 (84%), Gaps = 3/343 (0%)

Query: 1   MLTEGTRKPQGSVPIPP--RKINVQKYAKSRGPELLSLQSIVENRLNNNYSSQRNKRRRT 58
           M+TEGT+KPQ SVP PP  RKINVQKYA+SR  EL SLQ I+ENR+N++Y SQRNKRRRT
Sbjct: 1   MVTEGTKKPQVSVPPPPPPRKINVQKYAESRALELQSLQHIIENRVNSDYRSQRNKRRRT 60

Query: 59  TAFDSQIARKGGNRKRQKLGAVDKAHDESVLEKDQLKKLPRHIRRRYELKMNPENGFCTS 118
           TAF++QIARKG  RKRQKLG +DKA  ES LE+DQLKKL R +RRRYELK NPENGFCTS
Sbjct: 61  TAFNNQIARKGCRRKRQKLGIIDKALAESGLEEDQLKKLSRRVRRRYELKKNPENGFCTS 120

Query: 119 GDGTKRLRTHVWHAKRFAMTKLWGYNLPLGFQGRGKGSRAVLKRFKEGVLLHDSSYYTAV 178
           GDGTKRLRTHVWHAKRFAMTKLWGY+LPL  QGRGKGSRA+LKR K+GVL+HD+SYYTAV
Sbjct: 121 GDGTKRLRTHVWHAKRFAMTKLWGYHLPLCLQGRGKGSRALLKRLKQGVLVHDASYYTAV 180

Query: 179 QLEGPEDSLVSVLRMVLLPSLETET-PGNHDFSVLSGITYGTAMLYQVGAPVSQPIAPVT 237
           QLEGPEDSL+SVLRMVL P L T T PGNHD SVLS +TYG+AML+Q G P SQPIAPVT
Sbjct: 181 QLEGPEDSLMSVLRMVLEPYLATATHPGNHDDSVLSSVTYGSAMLHQYGTPDSQPIAPVT 240

Query: 238 YIWRPTFPQNKSTELDGRNHHTSSSQHDINDNSSNHDADLCEKSDVMKCGSSFRHIWVWI 297
           Y+W+P+  QN STELDGRN +TS  Q+DI ++ + H  +LCEKS   K GSS R +WVWI
Sbjct: 241 YMWQPSSQQNMSTELDGRNDYTSFRQYDIGNDLNKHGVELCEKSGKTKHGSSLRRLWVWI 300

Query: 298 HASAFEEGYDSLKFACQKEMEKSGVLINCLSLEGQLGKLELMG 340
           HASAFEEGYD+LK ACQKEMEK G+ INC SLEGQL KLEL+G
Sbjct: 301 HASAFEEGYDNLKIACQKEMEKGGISINCFSLEGQLAKLELIG 343


>Glyma13g06030.1 
          Length = 364

 Score =  368 bits (945), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/348 (57%), Positives = 239/348 (68%), Gaps = 35/348 (10%)

Query: 1   MLTEGTRKPQGSVPIPPR--KINVQKYAKSRGPELLSLQSIVENRLNNNYSSQRNKRRRT 58
           M+T+GT+KPQ SVP PP   KIN+QKYA+S   EL SLQSI+ENR+N++Y SQ+NKRRR 
Sbjct: 1   MVTDGTKKPQVSVPTPPPPWKINLQKYAESHALELHSLQSIIENRVNSDYRSQKNKRRRK 60

Query: 59  TAFDSQIARKGGNRKRQKLGAVDKAHDESVLEKDQLKKLPRHIRRRYELKMNPENGFCTS 118
           T FD+QIARKG  RKRQKLG +DKA  +S LE++  KKLPR + RRYELK NPENGFCTS
Sbjct: 61  TVFDNQIARKGCRRKRQKLGIIDKALAKSGLEENHQKKLPRCVHRRYELKKNPENGFCTS 120

Query: 119 GDGTKRLRTHVWHAKRFAMTKLWGYNLPLGFQGR-----GKGSRAVLKRFKEGVLLHDSS 173
           GD TKRLRTHVWHAK FAMTKLWGY+LPL  QGR      KGS        + ++L   S
Sbjct: 121 GDVTKRLRTHVWHAKWFAMTKLWGYHLPLCLQGRFEGALEKGSNKRCLYMMQAIIL--PS 178

Query: 174 YYTAVQLEGPEDSLVSVLRMVLLP-SLETETPGNHDFSVLSGITYGTAMLYQVGAPVSQP 232
            +   +L    DSL+SVLRM+L P    T  PGNHD SVL  +TYG AML+Q GAPVSQP
Sbjct: 179 NWRVQRLSCIHDSLMSVLRMMLEPYPTTTPHPGNHDDSVLYSVTYGRAMLHQCGAPVSQP 238

Query: 233 IAPVTYIWRPTFPQNKSTELDGRNHHTSSSQHDINDNSSNHDADLCEKSDVMKCGSSFRH 292
           IAP                           QHDI ++S+ H  +L EKS  MK  SSFR 
Sbjct: 239 IAPF-------------------------GQHDIGNDSNKHGVELSEKSGKMKHSSSFRR 273

Query: 293 IWVWIHASAFEEGYDSLKFACQKEMEKSGVLINCLSLEGQLGKLELMG 340
           +WVWI++S FEEGY++L+ +CQKEM+K  + INC SLEGQL KLEL+G
Sbjct: 274 LWVWINSSDFEEGYENLQISCQKEMDKRVISINCFSLEGQLAKLELIG 321


>Glyma16g00200.1 
          Length = 450

 Score =  344 bits (883), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 186/325 (57%), Positives = 220/325 (67%), Gaps = 36/325 (11%)

Query: 17  PRKINVQKYAKSRGPELLSLQSIVENRLNNNYSSQRNKRRRTTAFDSQIARKGGNRKRQK 76
           P KIN+QKYA+SR  EL SLQSI+ENR+N++Y SQ+NKRRRTT FD+QIARKG  RKRQK
Sbjct: 1   PWKINLQKYAESRALELHSLQSIIENRVNSDYRSQKNKRRRTTVFDNQIARKGCRRKRQK 60

Query: 77  LGAVDKAHDESVLEKDQLKKLPRHIRRRYELKMNPENGFCTSGDGTKRLRTHVWHAKRFA 136
           LG +DKA  +S LE++  KKLPR + RRYELK NPENGFCTSGD TKRLRTHVWHAK FA
Sbjct: 61  LGIIDKALAKSGLEENHQKKLPRCVHRRYELKKNPENGFCTSGDVTKRLRTHVWHAKWFA 120

Query: 137 MTKLWGYNLPLGFQGRGKGSRAVLKRFKEGVLLHDSSYYTAVQLEGPEDSLVSVLRMVLL 196
           MTKLWGY+LPL      KGS        + ++L  +            DSL+SVLRMVL 
Sbjct: 121 MTKLWGYHLPLFEGALEKGSNKGCLYMMQAIILPSNW----------RDSLMSVLRMVLE 170

Query: 197 P-SLETETPGNHDFSVLSGITYGTAMLYQVGAPVSQPIAPVTYIWRPTFPQNKSTELDGR 255
           P    T  PGNHD SVL  +TYG AML+Q GA VSQPIAP                    
Sbjct: 171 PYPATTPHPGNHDDSVLYSVTYGRAMLHQCGALVSQPIAPF------------------- 211

Query: 256 NHHTSSSQHDINDNSSNHDADLCEKSDVMKCGSSFRHIWVWIHASAFEEGYDSLKFACQK 315
                  QHDI ++S+ H  +L EKS  MK   SFR +WVWI++SAFEEGY++L+ +CQK
Sbjct: 212 ------GQHDIGNDSNKHGVELSEKSGKMKHNYSFRRLWVWINSSAFEEGYENLQISCQK 265

Query: 316 EMEKSGVLINCLSLEGQLGKLELMG 340
           EMEK  + INC SLEGQL KLEL+G
Sbjct: 266 EMEKRVISINCFSLEGQLAKLELIG 290


>Glyma09g00200.1 
          Length = 294

 Score =  336 bits (861), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 184/325 (56%), Positives = 220/325 (67%), Gaps = 43/325 (13%)

Query: 1   MLTEGTRKPQGSVPIPPR--KINVQKYAKSRGPELLSLQSIVENRLNNNYSSQRNKRRRT 58
           M+T+GT+KPQ SVP PP   KIN+QKYA+SR  EL SLQSI+ENR+N++Y SQ+NKRRRT
Sbjct: 1   MVTDGTKKPQVSVPTPPPPWKINLQKYAESRALELHSLQSIIENRVNSDYRSQKNKRRRT 60

Query: 59  TAFDSQIARKGGNRKRQKLGAVDKAHDESVLEKDQLKKLPRHIRRRYELKMNPENGFCTS 118
           T FD+QIARKG  RKRQKLG +DKA  +S LE++  KKLPR + RRYELK NPENGFCTS
Sbjct: 61  TVFDNQIARKGCRRKRQKLGIIDKALAKSGLEENHQKKLPRCVHRRYELKKNPENGFCTS 120

Query: 119 GDGTKRLRTHVWHAKRFAMTKLWGYNLPLGFQGR-----GKGSRAVLKRFKEGVLLHDSS 173
           GD TKRLRTHVWHAK FAMTKLWGY+LPL  QGR      KGS        + ++L  + 
Sbjct: 121 GDVTKRLRTHVWHAKWFAMTKLWGYHLPLCLQGRFEGALEKGSNKRCLYMMQAIILPSNW 180

Query: 174 YYTAVQLEGPEDSLVSVLRMVLLP-SLETETPGNHDFSVLSGITYGTAMLYQVGAPVSQP 232
                      DSL+SVLRMVL P    T  PGNHD SVL  +TYG AML+Q GAPVSQP
Sbjct: 181 ----------RDSLMSVLRMVLEPYPATTPHPGNHDDSVLYSVTYGRAMLHQCGAPVSQP 230

Query: 233 IAPVTYIWRPTFPQNKSTELDGRNHHTSSSQHDINDNSSNHDADLCEKSDVMKCGSSFRH 292
           IAP                           QHDI ++S+ H  +L EKS  MK  SSFR 
Sbjct: 231 IAPF-------------------------GQHDIGNDSNKHGVELSEKSGKMKHSSSFRR 265

Query: 293 IWVWIHASAFEEGYDSLKFACQKEM 317
           +WVWI++S FEEGY++L+ +CQKE+
Sbjct: 266 LWVWINSSDFEEGYENLQISCQKEV 290


>Glyma17g00200.1 
          Length = 347

 Score =  327 bits (838), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 184/343 (53%), Positives = 221/343 (64%), Gaps = 58/343 (16%)

Query: 1   MLTEGTRKPQGSVPIPPR--KINVQKYAKSRGPELLSLQSIVENRLNNNYSSQRNKRRRT 58
           M+T+GT+KPQ SVP PP   KIN+QKYA+S   +L SLQSI+ENR+N++Y SQ+NKRR T
Sbjct: 1   MVTDGTKKPQVSVPTPPPPWKINLQKYAESCALKLHSLQSIIENRVNSDYRSQKNKRR-T 59

Query: 59  TAFDSQIARKGGNRKRQKLGAVDKAHDESVLEKDQLKKLPRHIRRRYELKMNPENGFCTS 118
           T FD+QIARKG  RKRQKLG +DKA  +S LE++  KKLPR + RRYELK NPENGFC  
Sbjct: 60  TVFDNQIARKGCRRKRQKLGIIDKALAKSGLEENHQKKLPRCVHRRYELKKNPENGFCYD 119

Query: 119 GDGTKRLRTHVWHAKRFAMTKLWGYNLPLGFQGRGKGSRAVLKRFKEGVLLHDSSYYTAV 178
                                     LP  F    KG        K+ VL+HD+SYYTA+
Sbjct: 120 Q----------------------ALGLPPSFVSTRKG-------LKQEVLVHDASYYTAL 150

Query: 179 QLEGPEDSLVSVLRMVLLP-SLETETPGNHDFSVLSGITYGTAMLYQVGAPVSQPIAPVT 237
           QLEGPEDSL+SVLRMVL P    T  PGNHD SVL  +TYG AML+Q GAPVSQPIAP  
Sbjct: 151 QLEGPEDSLMSVLRMVLEPYPATTPHPGNHDDSVLYSVTYGRAMLHQCGAPVSQPIAPF- 209

Query: 238 YIWRPTFPQNKSTELDGRNHHTSSSQHDINDNSSNHDADLCEKSDVMKCGSSFRHIWVWI 297
                                    QHDI ++S+ H  +L EKS  MK  SSFR +WVWI
Sbjct: 210 ------------------------GQHDIGNDSNKHGVELSEKSGKMKHSSSFRRLWVWI 245

Query: 298 HASAFEEGYDSLKFACQKEMEKSGVLINCLSLEGQLGKLELMG 340
           ++S FEEGY++L+ +CQKEMEK  + INC SLEGQL KLEL+G
Sbjct: 246 NSSDFEEGYENLQISCQKEMEKRVISINCFSLEGQLAKLELIG 288


>Glyma05g33480.1 
          Length = 274

 Score =  313 bits (803), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 173/302 (57%), Positives = 206/302 (68%), Gaps = 30/302 (9%)

Query: 17  PRKINVQKYAKSRGPELLSLQSIVENRLNNNYSSQRNKRRRTTAFDSQIARKGGNRKRQK 76
           P KIN+QKYA+SR  EL SLQSI+ENR+NN+Y SQ+NKRRRT  FD+QIARKG  RKRQK
Sbjct: 1   PWKINLQKYAESRALELHSLQSIIENRVNNDYRSQKNKRRRTIVFDNQIARKGCRRKRQK 60

Query: 77  LGAVDKAHDESVLEKDQLKKLPRHIRRRYELKMNPENGFCTSGDGTKRLRTHVWHAKRFA 136
           LG +DKA  +S LE++  KKLPR + RRYELK N ENGFCTS D TKRLRTHVWHAK FA
Sbjct: 61  LGIIDKALAKSGLEENHQKKLPRCVHRRYELKKNLENGFCTSRDVTKRLRTHVWHAKWFA 120

Query: 137 MTKLWGYNLPLGFQGR-GKGSRAVLKRFKEGVLLHDSSYYTAVQLEGPEDSLVSVLRMVL 195
           MTKLWGY+LPL F+G   KGS        + ++L   S +   +L    DSL+SVLRMVL
Sbjct: 121 MTKLWGYHLPL-FEGTLEKGSNKGCLYMMQAIIL--PSNWRVQRLSCIHDSLMSVLRMVL 177

Query: 196 LP-SLETETPGNHDFSVLSGITYGTAMLYQVGAPVSQPIAPVTYIWRPTFPQNKSTELDG 254
            P    T  PGNHD SVL  +TYG AML+Q GAPVSQPIAP                   
Sbjct: 178 EPYPATTPHPGNHDDSVLYSVTYGRAMLHQCGAPVSQPIAPF------------------ 219

Query: 255 RNHHTSSSQHDINDNSSNHDADLCEKSDVMKCGSSFRHIWVWIHASAFEEGYDSLKFACQ 314
                   QHDI ++S+ H  +L EKS  MK  SSFR +WVWI++SAFEEGY++L+ +CQ
Sbjct: 220 -------GQHDIGNDSNKHGVELSEKSGKMKHSSSFRRLWVWINSSAFEEGYENLQISCQ 272

Query: 315 KE 316
           KE
Sbjct: 273 KE 274


>Glyma16g34860.1 
          Length = 261

 Score =  285 bits (730), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 161/303 (53%), Positives = 196/303 (64%), Gaps = 45/303 (14%)

Query: 17  PRKINVQKYAKSRGPELLSLQSIVENRLNNNYSSQRNKRRRTTAFDSQIARKGGNRKRQK 76
           P KIN+QKYA+SR  EL SLQSI++NR+N++Y SQ+NKRRR T FD+QI+RK   RK QK
Sbjct: 1   PWKINLQKYAESRALELHSLQSIIKNRVNSDYRSQKNKRRRKTVFDNQISRKWCRRKGQK 60

Query: 77  LGAVDKAHDESVLEKDQLKKLPRHIRRRYELKMNPENGFCTSGDGTKRLRTHVWHAKRFA 136
           LG +DKA  +S LE++  KKLPR + RRYELK NPENGFCTSGD TKRLRTHVWHAK FA
Sbjct: 61  LGIIDKALAKSGLEENHQKKLPRCVHRRYELKKNPENGFCTSGDVTKRLRTHVWHAKWFA 120

Query: 137 MTKLWGYNLPLG-FQGR-GKGSRAVLKRFKEGVLLHDSSYYTAVQLEGPEDSLVSVLRMV 194
           MTKLWGY+LPL  F+G   KGS        + ++L  +            DSL+SVLRMV
Sbjct: 121 MTKLWGYHLPLKRFEGALEKGSNKGCLYMMQAIILPSNW----------RDSLMSVLRMV 170

Query: 195 LLPS-LETETPGNHDFSVLSGITYGTAMLYQVGAPVSQPIAPVTYIWRPTFPQNKSTELD 253
           L P    T  PGNHD SVL  +TYG AML+Q GAP                         
Sbjct: 171 LEPHPATTPHPGNHDDSVLYSVTYGRAMLHQCGAPF------------------------ 206

Query: 254 GRNHHTSSSQHDINDNSSNHDADLCEKSDVMKCGSSFRHIWVWIHASAFEEGYDSLKFAC 313
                    QHDI ++S+ H  +L EKS  MK  SSFR +WVWI++SAFEEGY++L+ +C
Sbjct: 207 --------GQHDIGNDSNKHGVELSEKSGKMKHSSSFRRLWVWINSSAFEEGYENLQISC 258

Query: 314 QKE 316
           QKE
Sbjct: 259 QKE 261


>Glyma0048s00200.1 
          Length = 127

 Score =  169 bits (428), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 91/127 (71%), Positives = 104/127 (81%)

Query: 24  KYAKSRGPELLSLQSIVENRLNNNYSSQRNKRRRTTAFDSQIARKGGNRKRQKLGAVDKA 83
           KYA+SR  EL SLQSI+ENR+N++Y SQ+NKR  TT FD+QIARK   RKRQKLG +DKA
Sbjct: 1   KYAESRALELHSLQSIIENRVNSDYRSQQNKRIWTTVFDNQIARKRCRRKRQKLGIIDKA 60

Query: 84  HDESVLEKDQLKKLPRHIRRRYELKMNPENGFCTSGDGTKRLRTHVWHAKRFAMTKLWGY 143
             +S LE++  KKLPR + RRYELK NPENGFCTSGD TKRLRTHVWHAK FAMTKLWGY
Sbjct: 61  LAKSGLEENHQKKLPRCVHRRYELKKNPENGFCTSGDVTKRLRTHVWHAKWFAMTKLWGY 120

Query: 144 NLPLGFQ 150
           +LPL  Q
Sbjct: 121 HLPLCLQ 127