Miyakogusa Predicted Gene

Lj0g3v0273799.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0273799.1 tr|C1FGE2|C1FGE2_MICSR Cwf15/Cwc15 cell cycle
control family protein OS=Micromonas sp. (strain
RCC29,63.51,8e-18,Cwf_Cwc_15,Cwf15/Cwc15 cell cycle control protein;
SUBFAMILY NOT NAMED,NULL; CELL CYCLE CONTROL PROT,CUFF.18136.1
         (144 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g15050.1                                                       154   4e-38
Glyma05g04620.1                                                       115   2e-26
Glyma17g15050.2                                                        47   5e-06

>Glyma17g15050.1 
          Length = 228

 Score =  154 bits (388), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 77/108 (71%), Positives = 84/108 (77%), Gaps = 1/108 (0%)

Query: 1   MTTAAQPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRGDRQDTHDXXXXXXXX 60
           MTTAA+PTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPR + QDT D        
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTQDELKRRNLR 60

Query: 61  XXXXXXXXXHFSSKNKSYSDDRDHGKSNRLFLEGTKRDVEDNIVARSV 108
                    HFSSKNKSY DDRDHGK + LFLEG+KR++ED+IV RSV
Sbjct: 61  DELEDRERRHFSSKNKSY-DDRDHGKGSHLFLEGSKREMEDHIVPRSV 107


>Glyma05g04620.1 
          Length = 133

 Score =  115 bits (287), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/79 (70%), Positives = 59/79 (74%)

Query: 1  MTTAAQPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRGDRQDTHDXXXXXXXX 60
          MTTAA+PTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPR + QDT D        
Sbjct: 1  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTQDELKRRNLR 60

Query: 61 XXXXXXXXXHFSSKNKSYS 79
                   HFSSKNKSY+
Sbjct: 61 DELEDRERRHFSSKNKSYA 79


>Glyma17g15050.2 
          Length = 172

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 27/31 (87%)

Query: 78  YSDDRDHGKSNRLFLEGTKRDVEDNIVARSV 108
            +DDRDHGK + LFLEG+KR++ED+IV RSV
Sbjct: 21  LADDRDHGKGSHLFLEGSKREMEDHIVPRSV 51