Miyakogusa Predicted Gene

Lj0g3v0273739.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0273739.1 Non Chatacterized Hit- tr|D7KFW9|D7KFW9_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,41.11,0.00000000002,FtsH protease domain-like,NULL; seg,NULL;
FTSH HOMOLOG,NULL; METALLOPROTEASE M41 FTSH,NULL;
Peptidas,CUFF.18142.1
         (163 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g25840.1                                                       251   3e-67
Glyma06g02200.1                                                        72   4e-13
Glyma04g02100.1                                                        72   4e-13

>Glyma08g25840.1 
          Length = 272

 Score =  251 bits (640), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 118/126 (93%), Positives = 123/126 (97%)

Query: 1   MSVRKGHSKIFQQDLIDVLDKQLLEGMGVLLTEEEQQKCEESVSFEKKRLLAVHEAGHVV 60
           MSVRKGHSKIFQQD+IDVLDKQLLEGMGVLLTEEEQQKCE+ +SFEKKRLLAVHEAGHVV
Sbjct: 133 MSVRKGHSKIFQQDIIDVLDKQLLEGMGVLLTEEEQQKCEQRLSFEKKRLLAVHEAGHVV 192

Query: 61  LAHLFPRFDWHAFSQLLPGGKETAISVFYPREDMVDQGYTTFGYMMMQMVVAHGGRCAER 120
           LAHLFPRFDWHAFSQLLPGGKETAISVFYPREDMVDQGYTTFGYMMMQMVVAHGGRCAER
Sbjct: 193 LAHLFPRFDWHAFSQLLPGGKETAISVFYPREDMVDQGYTTFGYMMMQMVVAHGGRCAER 252

Query: 121 LGFGGE 126
           + FG +
Sbjct: 253 IIFGDD 258


>Glyma06g02200.1 
          Length = 696

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 2/115 (1%)

Query: 12  QQDLIDVLDKQLLEGMGVLLTEEEQQKCEESVSFEKKRLLAVHEAGHVVLAHLFPRFDWH 71
           ++DL ++   ++ + +  ++   E++     VS EKK+L+A HEAGH ++  L P +D  
Sbjct: 464 RRDLKEISKDEISDALERIIAGPEKKNA--VVSDEKKKLVAYHEAGHALVGALMPEYDPV 521

Query: 72  AFSQLLPGGKETAISVFYPREDMVDQGYTTFGYMMMQMVVAHGGRCAERLGFGGE 126
           A   ++P G+   ++ F P E+ ++ G  +  Y+  QM VA GGR AE + FG E
Sbjct: 522 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQE 576


>Glyma04g02100.1 
          Length = 694

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 2/115 (1%)

Query: 12  QQDLIDVLDKQLLEGMGVLLTEEEQQKCEESVSFEKKRLLAVHEAGHVVLAHLFPRFDWH 71
           ++DL ++   ++ + +  ++   E++     VS EKK+L+A HEAGH ++  L P +D  
Sbjct: 462 RRDLKEISKDEISDALERIIAGPEKKNA--VVSDEKKKLVAYHEAGHALVGALMPEYDPV 519

Query: 72  AFSQLLPGGKETAISVFYPREDMVDQGYTTFGYMMMQMVVAHGGRCAERLGFGGE 126
           A   ++P G+   ++ F P E+ ++ G  +  Y+  QM VA GGR AE + FG E
Sbjct: 520 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQE 574