Miyakogusa Predicted Gene

Lj0g3v0273479.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0273479.1 Non Chatacterized Hit- tr|I1KWF8|I1KWF8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,89.11,0,RNase_PH,Exoribonuclease, phosphorolytic domain 1;
RNase_PH_C,Exoribonuclease, phosphorolytic domain,CUFF.18117.1
         (303 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g27080.1                                                       479   e-135
Glyma14g22250.2                                                       460   e-130
Glyma18g50270.1                                                       456   e-128
Glyma14g22250.1                                                       453   e-128
Glyma11g01740.1                                                        92   5e-19
Glyma01g43760.1                                                        92   7e-19
Glyma02g07710.1                                                        81   1e-15
Glyma16g26780.1                                                        79   9e-15

>Glyma08g27080.1 
          Length = 302

 Score =  479 bits (1232), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 241/303 (79%), Positives = 255/303 (84%), Gaps = 1/303 (0%)

Query: 1   MGLPNTSEDLSSEMEVDAXXXXXXXXXXXXXXSESIRPDGRPLAKARDTSIFLGAVASAN 60
           MGLPN SEDLSSEMEVDA              +ESIRPDGRPL KAR+TSIFLGAVASAN
Sbjct: 1   MGLPNVSEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASAN 60

Query: 61  GSALVKIGSTTMLTAIKMEVMAPSLESPDVGCIAIDFHMPPICSPIVRPGRPAEASPVVT 120
           GSALVKIGSTT+LTAIKMEVM PSLESPD GC+AIDFHMPPICSPIVRPGRPAEASPVV+
Sbjct: 61  GSALVKIGSTTILTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVS 120

Query: 121 KQLSDTISSSGMIDLKELSLVSGKAAWMAYLDVYCXXXXXXXXXXXXXXXXXXXXXXQIP 180
           KQLSDTISSS MIDLKELSLVSGKAAWMAYLD+YC                      QIP
Sbjct: 121 KQLSDTISSSKMIDLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVASLSHLQIP 180

Query: 181 SVAMNDDGKIVLVSDEDGQKQAQELVNKEKRKLTLRNIPFSLTCILYKNYILADPTAEEE 240
            VAMNDDGKIVLVS+EDGQK+ QE VNKEKRKLTLR+IPFSLTCIL+KNYILADPTAEEE
Sbjct: 181 VVAMNDDGKIVLVSEEDGQKREQEPVNKEKRKLTLRSIPFSLTCILHKNYILADPTAEEE 240

Query: 241 SIMETHMTVVLNTSGQLISLYKPGGPVLAYTSALQDCVALTRQRVKELKSLLDRENSAAM 300
           SIMETH+TVVL+TSGQLISLYKPGGPVLAYTSA+QDC ALTRQRVKELKS LD+ NS AM
Sbjct: 241 SIMETHVTVVLDTSGQLISLYKPGGPVLAYTSAIQDCAALTRQRVKELKSFLDKANS-AM 299

Query: 301 EVE 303
           EVE
Sbjct: 300 EVE 302


>Glyma14g22250.2 
          Length = 299

 Score =  460 bits (1184), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 235/302 (77%), Positives = 248/302 (82%), Gaps = 5/302 (1%)

Query: 1   MGLPNTSEDLSSEMEVDAXXXXXXXXXXXXXXSESIRPDGRPLAKARDTSIFLGAVASAN 60
           MGL N SEDLSSEMEVDA              +ESIRPDGRPL KAR+TSIFLGAVASAN
Sbjct: 1   MGLSNASEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASAN 60

Query: 61  GSALVKIGSTTMLTAIKMEVMAPSLESPDVGCIAIDFHMPPICSPIVRPGRPAEASPVVT 120
           GSALVKIGSTTMLTAIKMEVM PSLESPD GC+AIDFHMPPICSPIVRPGRPAEASPVV+
Sbjct: 61  GSALVKIGSTTMLTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVS 120

Query: 121 KQLSDTISSSGMIDLKELSLVSGKAAWMAYLDVYCXXXXXXXXXXXXXXXXXXXXXXQIP 180
           KQLSDTISSS MIDLKELSLV GKAAWMAYLD+YC                      QIP
Sbjct: 121 KQLSDTISSSRMIDLKELSLVGGKAAWMAYLDIYCLDADGALFDAALISAVAALSHLQIP 180

Query: 181 SVAMNDDGKIVLVSDEDGQKQAQELVNKEKRKLTLRNIPFSLTCILYKNYILADPTAEEE 240
           +VAMNDDGKIVLVS EDGQK     VNKEKRKLTLR+IPFSLTCIL+KNYILADPTAEEE
Sbjct: 181 AVAMNDDGKIVLVSGEDGQKP----VNKEKRKLTLRSIPFSLTCILHKNYILADPTAEEE 236

Query: 241 SIMETHMTVVLNTSGQLISLYKPGGPVLAYTSALQDCVALTRQRVKELKSLLDRENSAAM 300
           SIMETH+T+VL+TSGQLISLYKPGGP LAYTSA+QDCV LT QRVKELKS LD+ENS AM
Sbjct: 237 SIMETHVTIVLDTSGQLISLYKPGGPALAYTSAIQDCVGLTGQRVKELKSYLDKENS-AM 295

Query: 301 EV 302
           EV
Sbjct: 296 EV 297


>Glyma18g50270.1 
          Length = 311

 Score =  456 bits (1173), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/312 (74%), Positives = 252/312 (80%), Gaps = 11/312 (3%)

Query: 1   MGLPNTSEDLSSEMEVDAXXXXXXXXXXXXXXSESIRPDGRPLAKARDTSIFLGAVASAN 60
           MGLPN SEDLSSE+EVDA              +ESIR DGRPL KAR+TSIFLGAVA AN
Sbjct: 1   MGLPNVSEDLSSEVEVDAFKRIFPLRYFERHLAESIRADGRPLGKARETSIFLGAVAFAN 60

Query: 61  GSALVKIGSTTMLTAIKMEVMAPSLESPDVGCI----------AIDFHMPPICSPIVRPG 110
           GSALVKIGSTTMLTAIKME+M PSLESPD GC+          +IDFHMPPICSPIVRPG
Sbjct: 61  GSALVKIGSTTMLTAIKMEIMTPSLESPDEGCLDWLLLVGPLMSIDFHMPPICSPIVRPG 120

Query: 111 RPAEASPVVTKQLSDTISSSGMIDLKELSLVSGKAAWMAYLDVYCXXXXXXXXXXXXXXX 170
           RPAEASP+V+KQLS+TISSS M DLKELSLVSGKAAWMAYLD+YC               
Sbjct: 121 RPAEASPMVSKQLSNTISSSRMTDLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSA 180

Query: 171 XXXXXXXQIPSVAMNDDGKIVLVSDEDGQKQAQELVNKEKRKLTLRNIPFSLTCILYKNY 230
                  QIPS+AMNDDGKIVLVSDEDGQK+AQE VNKEKRKLTLR+IPFSLTCIL+KNY
Sbjct: 181 IAALSHLQIPSIAMNDDGKIVLVSDEDGQKRAQEPVNKEKRKLTLRSIPFSLTCILHKNY 240

Query: 231 ILADPTAEEESIMETHMTVVLNTSGQLISLYKPGGPVLAYTSALQDCVALTRQRVKELKS 290
           ILADPTAEEESIMETH+TVVL+TSGQLISLYKPGGPVLAYTSA+QDC ALTRQRVKEL +
Sbjct: 241 ILADPTAEEESIMETHVTVVLDTSGQLISLYKPGGPVLAYTSAIQDCAALTRQRVKELNN 300

Query: 291 LLDRENSAAMEV 302
            LD+ NS AMEV
Sbjct: 301 FLDKANS-AMEV 311


>Glyma14g22250.1 
          Length = 307

 Score =  453 bits (1166), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/310 (75%), Positives = 248/310 (80%), Gaps = 13/310 (4%)

Query: 1   MGLPNTSEDLSSEMEVDAXXXXXXXXXXXXXXSESIRPDGRPLAKARDTSIFLGAVASAN 60
           MGL N SEDLSSEMEVDA              +ESIRPDGRPL KAR+TSIFLGAVASAN
Sbjct: 1   MGLSNASEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASAN 60

Query: 61  GSALVKIGSTTMLTAIKMEVMAPSLESPDVGCIAIDFHMPPICSPIVRPGRPAEASPVVT 120
           GSALVKIGSTTMLTAIKMEVM PSLESPD GC+AIDFHMPPICSPIVRPGRPAEASPVV+
Sbjct: 61  GSALVKIGSTTMLTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVS 120

Query: 121 KQLSDTISSSGMIDLKELSLVSGKAAWMAYL--------DVYCXXXXXXXXXXXXXXXXX 172
           KQLSDTISSS MIDLKELSLV GKAAWMAYL        D+YC                 
Sbjct: 121 KQLSDTISSSRMIDLKELSLVGGKAAWMAYLNAAFSIMQDIYCLDADGALFDAALISAVA 180

Query: 173 XXXXXQIPSVAMNDDGKIVLVSDEDGQKQAQELVNKEKRKLTLRNIPFSLTCILYKNYIL 232
                QIP+VAMNDDGKIVLVS EDGQK     VNKEKRKLTLR+IPFSLTCIL+KNYIL
Sbjct: 181 ALSHLQIPAVAMNDDGKIVLVSGEDGQKP----VNKEKRKLTLRSIPFSLTCILHKNYIL 236

Query: 233 ADPTAEEESIMETHMTVVLNTSGQLISLYKPGGPVLAYTSALQDCVALTRQRVKELKSLL 292
           ADPTAEEESIMETH+T+VL+TSGQLISLYKPGGP LAYTSA+QDCV LT QRVKELKS L
Sbjct: 237 ADPTAEEESIMETHVTIVLDTSGQLISLYKPGGPALAYTSAIQDCVGLTGQRVKELKSYL 296

Query: 293 DRENSAAMEV 302
           D+ENS AMEV
Sbjct: 297 DKENS-AMEV 305


>Glyma11g01740.1 
          Length = 1058

 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 123/256 (48%), Gaps = 16/256 (6%)

Query: 36  IRPDGRPLAKARDTSIFLGAVASANGSALVKIGSTTMLTAIKMEVMAPSLESPDVGCIAI 95
           +R DGR  +  R  ++ L   A  +GSA V +G T ++T +  +++ P  + P+ G ++I
Sbjct: 647 LRLDGRRPSDYRKLTVKL---AKQDGSAEVHLGQTHVMTFVTAQLVRPYRDRPNEGSLSI 703

Query: 96  DFHMPPICSPIVRPGRPAEASPVVTKQLSDTISSSGMIDLKELSLVSGKAAWMAYLDVYC 155
                P+  P   PGRP++A+  + + +   +  S  ID + L ++SGK  W   +D++ 
Sbjct: 704 FTEFSPMADPSFDPGRPSDAAVELGRVVDRGLRESRAIDTESLCVLSGKLVWAIRVDIHI 763

Query: 156 XXXXXXXXXXXXXXXXXXXXXXQIPSVAM-NDDGKIVLVSDEDGQKQAQELVNKEKRKLT 214
                                 + P  ++  +DG+ V+V   +          ++   L 
Sbjct: 764 LDNAGNLVDAANIAALASLLTFRRPECSLAGEDGQDVVVHPPE---------ERDPIPLI 814

Query: 215 LRNIPFSLTCILY--KNYILADPTAEEESIMETHMTVVLNTSGQLISLYKPGGPVLAYTS 272
           + ++P ++T   +  +N ++ DPT  EE +M   MT  LN++G + ++ KPGG  +++ S
Sbjct: 815 IHHLPIAVTFGFFSNENLLVIDPTHHEECVMTGRMTATLNSNGDVCAIQKPGGESVSH-S 873

Query: 273 ALQDCVALTRQRVKEL 288
            +  C+ L   +  ++
Sbjct: 874 VIMHCLKLAHVKATDI 889


>Glyma01g43760.1 
          Length = 350

 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 122/258 (47%), Gaps = 16/258 (6%)

Query: 36  IRPDGRPLAKARDTSIFLGAVASANGSALVKIGSTTMLTAIKMEVMAPSLESPDVGCIAI 95
           +R DGR  +  R  +I L   A  +GSA V +G T ++T +  +++ P  + P+ G ++I
Sbjct: 27  LRVDGRRPSDYRKLTIKL---AKQDGSAEVHLGQTHVITFVTAQLVRPYRDRPNEGSLSI 83

Query: 96  DFHMPPICSPIVRPGRPAEASPVVTKQLSDTISSSGMIDLKELSLVSGKAAWMAYLDVYC 155
                P+  P   PGRP +A+  + + +   +  S  ID + L ++SGK  W   +D++ 
Sbjct: 84  FTEFSPMADPSFEPGRPTDAAVELGRVVDRGLRESRAIDTESLCVLSGKLVWAIRVDIHI 143

Query: 156 XXXXXXXXXXXXXXXXXXXXXXQIPSVAM-NDDGKIVLVSDEDGQKQAQELVNKEKRKLT 214
                                 + P  ++  +DG+ V+V   +          ++   L 
Sbjct: 144 LDNAGNLVDAANIAALVSLLTFRRPECSLTGEDGQDVVVHPPE---------ERDPIPLI 194

Query: 215 LRNIPFSLTCILY--KNYILADPTAEEESIMETHMTVVLNTSGQLISLYKPGGPVLAYTS 272
           + ++P ++T   +  +N ++ DPT  EE +M   MT  LN++G + ++ KPGG  ++  S
Sbjct: 195 IHHLPIAVTFGFFSNENLLVIDPTHHEECVMTGRMTATLNSNGDVCAIQKPGGESVSQ-S 253

Query: 273 ALQDCVALTRQRVKELKS 290
            +  C+ L   +  ++ +
Sbjct: 254 VIMHCLKLAHVKATDITT 271


>Glyma02g07710.1 
          Length = 286

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 31/281 (11%)

Query: 33  SESIRPDGRPLAKARDTSIFLGAVASANGSALVKIGSTTMLTAIKMEVMAPSLESPDVGC 92
           ++ +R DGR     R  S+  G +   NGSA V++G+T ++ ++K E+  PSL  PD G 
Sbjct: 17  AQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASVKAELGKPSLLQPDKGK 76

Query: 93  IAIDFHMPPICSPIVRPGRPAEASPVVTKQLSDTI--------SSSGM-IDLKELSLVSG 143
           ++I       CS    P         +  +LS+ +        S  G  IDL  L +V G
Sbjct: 77  VSIYID----CSSTAEPAFEGRGGDELAAELSNALQHCLLGGKSGEGAGIDLSSLIVVEG 132

Query: 144 KAAWMAYLDVYCXXXXXXXXXXXXXXXXXXXXXXQIPSVAM-----NDDGKIVLVSDEDG 198
           K  W  Y+D                          IP V +     ND+   V VSDE  
Sbjct: 133 KICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVEVAAGTSNDEHPEVDVSDE-- 190

Query: 199 QKQAQELVNKEKRKLTLRNIPFSLTCILYKNYILADPTAEEESIMETHMTVVLNTSGQLI 258
                     E  +     +P  +T      + + D T+EEES M + +++ +N  G + 
Sbjct: 191 ----------EFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSGVSISVNRQGHIC 240

Query: 259 SLYKPGGPVLAYTSALQDCVALTRQRVKELKSLLDRENSAA 299
            + K GG  L   S + D +++ +   ++L + LD E ++A
Sbjct: 241 GITKRGGVGLD-PSIILDMISVAKHVSEQLINKLDSEIASA 280


>Glyma16g26780.1 
          Length = 286

 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 31/275 (11%)

Query: 33  SESIRPDGRPLAKARDTSIFLGAVASANGSALVKIGSTTMLTAIKMEVMAPSLESPDVGC 92
           ++ +R DGR     R  S+  G +   NGSA V++G+T ++ ++K E+  PSL  PD G 
Sbjct: 17  AQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASVKAELGKPSLLQPDKGK 76

Query: 93  IAIDFHMPPICSPIVRP---GR-----PAEASPVVTKQLSDTISSSGM-IDLKELSLVSG 143
           ++I       CS    P   GR      AE S  + + L    S +G  IDL  L +V G
Sbjct: 77  VSIYVD----CSSTAEPAFEGRGGDELAAELSNALQRCLLGGKSGAGAGIDLSSLIVVEG 132

Query: 144 KAAWMAYLDVYCXXXXXXXXXXXXXXXXXXXXXXQIPSVAM-----NDDGKIVLVSDEDG 198
           K  W  Y+D                          IP V +     ND+   V VSDE  
Sbjct: 133 KICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGTSNDEHPEVDVSDE-- 190

Query: 199 QKQAQELVNKEKRKLTLRNIPFSLTCILYKNYILADPTAEEESIMETHMTVVLNTSGQLI 258
                     E  +     +P  +T      + + D T+EEES M + +++ +N  G + 
Sbjct: 191 ----------EFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSAVSISVNRQGHIC 240

Query: 259 SLYKPGGPVLAYTSALQDCVALTRQRVKELKSLLD 293
            + K GG  L   S + D +++ +   ++L + LD
Sbjct: 241 GITKRGGVGLD-PSIILDMISVAKHVSEQLINKLD 274